Workshop proposals are invited on a broad range of topics, including but not limited to the following ones. For clarity and balance, topics are organized into three main thematic categories:

1. Omics & Systems Biology

   • Sequence Analysis

   • Single-cell Sequencing

   • Omics Data Integration and Analysis

   • Genomic Variation and Disease

   • Haplotypes and Population Genomics

   • Phylogenetics

   • Protein and RNA Analysis, Structure, and Dynamics

   • Metagenomics and Algorithms for Microbiomes

   • Cancer Genomics

   • Pharmacogenomics

   • Systems Biology

   • Biological Networks and Integrative Analysis

   • No-Boundary Thinking in Bioinformatics

2. Clinical & Healthcare Informatics

   • Imaging Informatics

   • Imaging Genomics and Radiation Genomics

   • Computational Phenotyping

   • Automated Diagnosis and Prediction

   • Clinical Databases and Information Systems

   • Public Health and Population Health Informatics

   • Infectious Disease Networks and Computational Epidemiology

   • Social Network Analysis for Health Applications

   • Data Security and Privacy

   • Knowledge Representation Applications

3. AI & Data Science

   • AI and Machine Learning in Medicine and Healthcare

   • Computational Drug Discovery

   • Multimodality Modeling

   • Natural Language Processing (NLP) and Text Mining

   • Large Language Models (LLMs) for Healthcare Applications

   • Data Integration, Harmonization, and Ontology

   • Biomedical and Health Data Visualization

Each workshop proposal can be up to 5 page long and it must include the following information:

• motivation and rationale for the workshop

• proposed workshop length: half day or a full-day with a lunchtime break

• names and affiliations of main organizers

• a description of the workshop format, i.e. peer-reviewed proceedings, position papers and invited talks, panels, in-depth tutorials/demos:

  • for peer-reviewed sessions, the planned peer-reviewed process should be detailed;

  • for invited talks, a potential list of speakers should be provided;

  • for panels, the main topic along with a list of panel questions to be addressed and a potential list of panelists should be provided;

  • for teaching workshops, a draft syllabus should be provided;

  • for demonstration workshops, a general outline of the planned activities and prerequisite materials needed should be described.

• a detailed timeline for inviting and accepting papers and presenters to the workshop should be presented:

  • an important goal of the workshops is to engage participants via interactions and/or community building. Each proposal is expected to describe its plans to achieve this goal;

  • any other relevant information to your proposal workshop (e.g. was the proposed workshop already held in the past and in other venues? If so, when and where?);

  • if a workshop plans to accept papers, the paper submission deadline is strongly recommended to be a few days after the final decision of the main conference.

For the continuing workshops (i.e., the workshops already held at previous BCB conferences), a shorter proposal is expected and it will include the following information:

• proposed workshop length: half day, or a full-day with a lunchtime break;

• names and affiliations of main organizers;

• a detailed timeline for inviting and accepting papers and presenters for the workshop should be presented;

• any change of plans compared to past year(s);

• past year experiences, number of submissions and accepted papers, results and lessons learned, plan to improve;

Individuals submitting workshops are requested to start implementing the proposed plan only the final acceptance notification of the proposed workshop.

In-person workshops are strongly encouraged to foster interaction and community building.

Hybrid workshops are allowed as an option, recognizing that ACM-BCB 2026 will be held for the first time in Europe, and some participants may not be able to attend in person;

Workshop proposals should clearly specify whether the workshop is in-person or hybrid, and describe how engagement will be ensured across participation modes;

At least one of the workshop organizers is requested to attend the workshop in person, and to be able to manage the workshop local organization collaborating with conference local organizers.

The conference proceedings will include a one-page workshop summary/abstract for each accepted workshop proposal.

Papers accepted and presented at the workshops will not be published in the conference proceedings. Workshop organizers are responsible for arranging their own publication venue for accepted workshop papers, such as a journal special issue, an external proceedings volume, or an open-access repository.

Each workshop proposal can be up to 5 pages. The proposers are requested to address all the above listed details. Submitted proposals must comply with the requirements delineated on the ACM Master Article Template website.

Submissions are handled via Open Review.