PUBLICATIONS

2022-2025

Baugher R, Nehmetallah G, Raub CB. Comparison of Gold Nanoparticle and Fluorophore-conjugated Antibodies for Labeling Epitopes in Permeabilized Cells. J Histochem Cytochem. 2025, 73(5-6): 00221554251348502.

 Albashir SM, Robert RC, Jairath NN, Raub CB, Alzumai OA, Salem SS. The rapid shallow breathing index (RSBI) as a predictor for extubation success in medical and surgical ICU patients: A retrospective cohort study. Heart Lung. 2025:70,321-328.

 Alqosiri HM, Alqasiri HM, Alqasire SE, Nava VE, Bandyopadhyay BC, Raub CB. Breast cancer extracellular matrix invasion depends on local mechanical loading of the collagen network. J Mat Chem B. 2025, 13:8068-8082.

Ly KL, Rajtboriraks M, Elgerbi A, Luo X, Raub CB. Recombinant Human Keratinocyte Growth Factor Ameliorates Cancer Treatment-Induced Oral Mucositis on a Chip. Adv Healthc Mater. 2024 Jun;13(14):e2302970. doi: 10.1002/adhm.202302970. Epub 2024 Feb 22. PubMed PMID: 38351394; PubMed Central PMCID: PMC11144107.

Awuah Boadi E, Shin S, Choi BE, Ly K, Raub CB, Bandyopadhyay BC. Sex-specific Stone-forming Phenotype in Mice During Hypercalciuria/Urine Alkalinization. Lab Invest. 2024 May;104(5):102047. doi: 10.1016/j.labinv.2024.102047. Epub 2024 Mar 5. PubMed PMID: 38452902; PubMed Central PMCID: PMC11103239.

Correa S, Staten E, Nehmetallah G, Raub C. Inexpensive bioprinting on a microscope using liquid crystal displays and visible light. Bioprinting. 2023 November; 35:e00305-. doi: 10.1016/j.bprint.2023.e00305.

Bazow B, Phan T, Raub CB, Nehmetallah G. Three-dimensional refractive index estimation based on deep-inverse non-interferometric optical diffraction tomography (ODT-Deep). Opt Express. 2023 Aug 14;31(17):28382-28399. doi: 10.1364/OE.491707. PubMed PMID: 37710893.

Ezell M, Shin S, Chen Y, Ly K, Maddi L, Raub CB, Bandyopadhyay BC. Stabilization of uric acid mixed crystals by melamine. J Cryst Growth. 2023 Apr 15;608. doi: 10.1016/j.jcrysgro.2023.127134. Epub 2023 Feb 15. PubMed PMID: 37193265; PubMed Central PMCID: PMC10168670.

Ly KL, Hu P, Raub CB, Luo X. Programmable Physical Properties of Freestanding Chitosan Membranes Electrofabricated in Microfluidics. Membranes (Basel). 2023 Feb 28;13(3). doi: 10.3390/membranes13030294. PubMed PMID: 36984680; PubMed Central PMCID: PMC10052736.

Bazow B, Lam VK, Phan T, Chung BM, Nehmetallah G, Raub CB. Digital Holographic Microscopy to Assess Cell Behavior. Methods Mol Biol. 2023;2644:247-266. doi: 10.1007/978-1-0716-3052-5_16. PubMed PMID: 37142927.

Ly KL, Luo X, Raub CB. Oral mucositis on a chip: modeling induction by chemo- and radiation treatments and recovery. Biofabrication. 2022 Oct 27;15(1). doi: 10.1088/1758-5090/ac933b. PubMed PMID: 36126642; PubMed Central PMCID: PMC9780701.

Bazow B, Phan T, Raub CB, Nehmetallah G. Computational multi-wavelength phase synthesis using convolutional neural networks [Invited]. Appl Opt. 2022 Feb 10;61(5):B132-B146. doi: 10.1364/AO.439323. PubMed PMID: 35201134.

Lam VK, Phan T, Ly K, Luo X, Nehmetallah G, Raub CB. Dual-modality digital holographic and polarization microscope to quantify phase and birefringence signals in biospecimens with a complex microstructure. Biomed Opt Express. 2022 Feb 1;13(2):805-823. doi: 10.1364/BOE.449125. eCollection 2022 Feb 1. PubMed PMID: 35284161; PubMed Central PMCID: PMC8884236.

2021

R Hunyh, G Nehmetallah, CB Raub. Mueller matrix polarimetry and polar decomposition of articular cartilage imaged in reflectance. Biomedical Optics Express, 12(8), 5160-5178, 2021. https://doi.org/10.1364/BOE.428223.

B Bazow, T Phan, T Nguyen, C Raub, G Nehmetallah. Simulation of digital holographic recording and reconstruction using a generalized matrix method. Applied Optics 60 (4), A21-A37, 2021. https://doi.org/10.1364/AO.404405.

Khanh L Ly, Seyed Ali Rooholghodos, Christopher Rahimi, Benjamin Rahimi, Diane R Bienek, Gili Kaufman, Christopher B Raub, Xiaolong Luo. An Oral-mucosa-on-a-chip sensitively evaluates cell responses to dental monomers. Biomedical Microdevices 23 (1), 1-11, 2021. https://doi.org/10.1007/s10544-021-00543-6. 

Sarah Alsharif, Pooja Sharma, Karina Bursch, Rachel Milliken, Van Lam, Arwa Fallatah, Thuc Phan, Meagan Collins, Priya Dohlman, Sarah Tiufekchiev, Georges Nehmetallah, Christopher B Raub, Byung Min Chung. Keratin 19 maintains E-cadherin localization at the cell surface and stabilizes cell-cell adhesion of MCF7 cells. Cell adhesion & migration. 15(1):1-17, 2021. https://doi.org/10.1080/19336918.2020.1868694.

2020

Nguyen T, Bui V, Thai A, Lam V, Raub CB, Chang L-C, and G. Nehmetallah. Virtual organelle self-coding for fluorescence imaging via adversarial learning. Journal of Biomedical Optics. 25(9), 096009-1 to 18, 2020. https://doi.org/10.1117/1.JBO.25.9.096009. 

Bazow B, Phan T, Nguyen T, Raub CB, and G Nehmetallah. Simulation of Digital Holographic Recording and Reconstruction Using Generalized Matrix Method. Applied Optics. (e-published), 2020. https://doi.org/10.1364/AO.404405.

Sharma P, Lam VK, Raub CB, and BM Chung. Tracking Single Cells Motility on Different Substrates. Methods and Protocols. 3(3): 56, 2020. https://doi.org/10.3390/mps3030056. 

Correa SO, Luo X, and CB Raub. Microfluidic fabrication of stable collagen microgels with aligned microstructure using flow-driven co-deposition and ionic gelation. Journal of Micromechanics and Microengineering. 30(8): 085002, 2020. https://doi.org/10.1088/1361-6439/ab8ebf.

Mohammadabadi A, Huynh RN, Wadajkar AS, Lapidus RG, Kim AJ, Raub CB, and V Frenkel. Pulsed focused ultrasound lowers interstitial fluid pressure and increases nanoparticle delivery and penetration in head and neck squamous cell carcinoma xenograft tumors. Physics in Medicine and Biology. 65(12):125017, 2020. https://doi.org/10.1088/1361-6560/ab9705.

Lam VK, Sharma P, Nguyen T, Nehmetallah G, Raub CB*, and BM Chung* (*equal contribution). Morphology, Motility, and Cytoskeletal Architecture of Breast Cancer Cells Depend on Keratin 19 and Substrate. Cytometry A, 2020 (early view). https://doi.org/10.1002/cyto.a.24011.

Huynh RN, Yousof M, Ly KL, Gombedza FC, Luo X, Bandyopadhyay BC, and CB Raub. Microstructural densification and alignment by aspiration-ejection influence cancer cell interactions with three-dimensional collagen networks. Biotechnology and Bioengineering. 117(6):1826-1838, 2020. https://doi.org/10.1002/bit.27308. 

Lam VK, Nguyen TC, Bui V, Chung BM, Chang LC, Nehmetallah G, and CB Raub. Quantitative scoring of epithelial and mesenchymal qualities of cancer cells using machine learning and quantitative phase imaging. Journal of Biomedical Optics. 25(2):026002, 2020. https://doi.org/10.1117/1.JBO.25.2.026002.

Wu S, Yan K, Li J, Huynh RN, Raub CB, Shen J, Shi X, and GF Payne. Electrical cuing of chitosan's mesoscale organization. Reactive and Functional Polymers. 148:104492, 2020. https://doi.org/10.1016/j.reactfunctpolym.2020.104492.

Ly K, Raub CB, and X Luo. Tuning the porosity of biofabricated chitosan membranes in microfluidics with co-assembled nanoparticles as template. Materials Advances. 1:34-44, 2020. DOI: 10.1039/D0MA00073F.

Hu P, CB Raub, JS Choy, and X Luo. Modulating the properties of flow-assembled chitosan membranes in microfluidics with glutaraldehyde crosslinking. Journal of Materials Chemistry B. 8:2519-2529, 2020. https://doi.org/10.1039/C9TB02527H.

2019

Huynh RN, Pesante B, Nehmetallah G, and CB Raub. Polarized reflectance from articular cartilage depends upon superficial zone collagen network microstructure. Biomedical Optics Express. 10(11): 5518-5534, 2019. https://doi.org/10.1364/BOE.10.005518.

Boadi EA, Deems NJ, Raub CB, and BC Bandyopadhyay. Matting Calcium Crystals by Melamine Improves Stabilization and Prevents Dissolution. Crystal Growth and Design. 19(11): 6636-48, 2019. https://doi.org/10.1021/acs.cgd.9b01036.

Lam VK, Nguyen T, Phan T, Chung BM, Nehmetallah G, and CB Raub. Machine Learning with Optical Phase Signatures for Phenotypic Profiling of Cell Lines. Cytometry Part A. 95(7): 757-768, 2019. https://doi.org/10.1002/cyto.a.23774.

2018

Rahimi C, Rahimi B, Padova D, Rooholghodos SA, Bienek D, Luo X, Kaufman G, and CB Raub. Oral mucosa-on-a-chip to assess layer-specific responses to bacteria and dental materials. Biomicrofluidics. 12(5): 054106, 2018.  https://doi.org/10.1063/1.5048938.

Chao Jia, Feng Jiang, Piao Hu, Yudi Kuang, Shuaiming He, Tian Li, Chaoji Chen, Alan Murphy, Chunpeng Yang, Yonggang Yao, Jiaqi Dai, Christopher B Raub, Xiaolong Luo, Liangbing Hu. Anisotropic, Mesoporous Microfluidic Frameworks with Scalable, Aligned Cellulose Nanofibers. ACS Applied Materials and Interfaces. 10(8): 7362-7370, 2018. https://doi.org/10.1021/acsami.7b17764.

Lam V, Nguyen T, Nehmetallah G, and CB Raub. Quantitative assessment of cancer cell morphology and movement using telecentric digital holographic microscopy. Cytometry A. 93(3): 334-345, 2018. https://doi.org/10.1002/cyto.a.23316.

2017

Yan K, Zhang J, Correa SO, Shang W, Tsai C-C, Bentley WE, Shen J, Scarcelli G, Raub CB, Shi X-W, and GF Payne. Electrical Programming of Soft Matter: Using Temporally Varying Electrical Inputs to Spatially Control Self Assembly. Biomacromolecules. 19(2): 364-373, 2017. https://doi.org/10.1021/acs.biomac.7b01464.

Alshehri A, Wilson OC Jr., Dahal B, Philip J, Luo X, and CB Raub. Magnetic nanoparticle-loaded alginate beads for local micro-actuation of in vitro tissue constructs. Colloids and Surfaces B: Biointerfaces. 159(1): 945-955, 2017. https://doi.org/10.1016/j.colsurfb.2017.08.062.

Li K, Correa SO, Pham P, Raub CB, and X Luo. Birefringence of flow-assembled chitosan membranes in microfluidics. Biofabrication. 9(3): 0343101, 2017. https://doi.org/10.1088/1758-5090/aa786e.

Raub CB, and G Nehmetallah. Holography, Machine Learning, and Cancer Cells. Cytometry A. 91: 754-756, 2017. DOI: 10.1002/cyto.a.23112.

Nguyen T, Bui V, Lam V, Raub CB, Chang, L-C, and G Nehmetallah. Automatic phase aberration compensation for digital holographic microscopy based on deep learning background detection. Optics Express. 25(13): 15043-15057, 2017. https://doi.org/10.1364/OE.25.015043.

Huynh RN, Nehmetallah G, and CB Raub. Noninvasive assessment of articular cartilage surface damage using reflected polarized light microscopy. Journal of Biomedical Optics. 22(6): 065001, 2017. https://doi.org/10.1117/1.JBO.22.6.065001.

Bui L, Aleid A, Alassaf A, Wilson OC, Raub CB, and Frenkel V. Development of a custom biological scaffold for investigating ultrasound-mediated intracellular delivery. Mater Sci Eng C Mater Biol Appl. 70(Pt 1): 461-470, 2017. https://doi.org/10.1016/j.msec.2016.09.029.

2016

Nguyen T, Nehmetallah G, Raub CB, Mathews S, and Aylo R. Accurate quantitative phase digital holographic microscopy with single- and multiple-wavelength telecentric and nontelecentric configurations. Applied Optics. 55(21): 5666-83, 2016. https://doi.org/10.1364/AO.55.005666.

Raub CB, Lee C, Shibata D, Taylor C, and E Kartalov. HistoMosaic detects KRAS G12V mutation across human colorectal cancer tissue slices through in situ PCR. Analytical Chemistry. 88(5): 2792-9, 2016. https://doi.org/10.1021/acs.analchem.5b04460.

2015 and earlier

Raub CB, Lee C, and E Kartalov. Sequestration of bacteria from whole blood by optimized microfluidic cross-flow filtration for Rapid Antimicrobial Susceptibility Testing. Sensors and Actuators B. 210: 120-123, 2015. https://doi.org/10.1016/j.snb.2014.10.061.

Raub CB, Hsu SC, Chan EF, Chen AC, Truncale KG, Semler EJ, Chnari E, and RL Sah. Microstructural remodeling of articular cartilage following defect repair by osteochondral autograft transfer. Osteoarthritis and Cartilage. 21(6):860-8, 2013.

Stender ME, Raub CB, Yamauchi K, Shirazi R, Vena P, Sah RL, Hazelwood SJ, and SM Klisch. TGF-β1 and IGF-1 modulate articular cartilage collagen fiber modulus: continuous anisotropic fiber distribution FEA using qPLM, biochemical assay, and mechanical test data. Journal of Biomechanics. (e-published).

Raub CB, Putnam AJ, Tromberg BJ, and SC George. Predicting bulk mechanical properties of cellularized collagen gels using multiphoton microscopy. Acta Biomaterialia. 6(12):4657-65, 2010.

 Raub CB, Mahon S, Narula N, Tromberg BJ, Brenner M, and SC George. Linking optics and mechanics in an in vivo model of airway fibrosis and epithelial injury. Journal of Biomedical Optics. 15(1):015004, 2010.

Kreuter KA, Mahon SB, Mukai DS, Su J, Jung WG, Narula N, Guo S, Wakida N, Raub CB, Berns MW, George SC, Chen Z , and M Brenner. Detection and monitoring of early airway injury effects of half-mustard (2-chloroethylethylsulfide) exposure using high resolution optical coherence tomography. Journal of Biomedical Optics. 14(4):044037, 2009.

Malavia NK, Raub CB, Mahon SB, Brenner M, Panattieri RA Jr, and SC George. Airway epithelium stimulates smooth muscle proliferation. American Journal of Respiratory Cell and Molecular Biology. 41(3):297-304, 2009.

Malavia NK, Mih JD, Raub CB, Dinh BT, and SC George. IL-13 induces a bronchial epithelial phenotype that is profibrotic. Respiratory Research. 9(1):27, 2008.

Raub CB, Unruh J, Suresh V, Krasieva T, Lindmo T, Gratton E, Tromberg BJ, and SC George. Image correlation spectroscopy of multiphoton images correlates with collagen mechanical properties. Biophysical Journal. 94(6):2361-73, 2008.

Ghajar CM, Suresh V, Peyton SR, Raub CB, Meyskens FL Jr., George SC, and AJ Putnam. A novel three-dimensional model to quantify metastatic melanoma invasion. Molecular Cancer Therapeutics. 6(2):552-61, 2007.

Raub CB, Suresh V, Krasieva T, Lyubovitsky J, Mih JD, Putnam AJ, Tromberg BJ, and SC George. Noninvasive assessment of collagen gel microstructure and mechanics using multiphoton microscopy. Biophysical Journal. 92(6):2212-22, 2007.

Peyton S, Raub CB, Keshrumrus V, and AJ Putnam. The use of poly(ethylene glycol) hydrogels to investigate the impact of ECM chemistry and mechanics on smooth muscle cells. Biomaterials. 27(28):4881-93, 2006.