Publications

Selected papers:

Jeong KH, Ko JH, Son SB, Lee JY (2023) "Structural insights into the transcriptional regulator NalC, a key component of the MexAB-OprM efflux pump system, from Pseudomonas aeruginosa" Biochem Biophys Res Commun 30:679:47-51. PMID: 37666047


Jeong KH, Lee HJ, Park YW, Lee JY (2022) "Structural Basis of Redox-Sensing Transcriptional Repressor Rex with Cofactor NAD+ and Operator DNA" Int J Mol Sci 23(3): 1578. PMID: 35163512 


Lee DW,  Park YW, Lee MY, Jeong KH, Lee JY (2020) "Structural analysis and insight into effector binding of the niacin-responsive repressor NiaR from Bacillus halodurans"  Sci Rep. 10: 21039. PMID: 33273654  


Lee MY, Lee DW, Joo HK, Jeong KH, Lee JY (2019) "Structural analysis of the manganese transport regulator MntR from Bacillus halodurans in apo and manganese bound forms." PLoS One 14(11): e0224689.PMID: 31738781


Park YW, Jang YY, Joo HK, Lee JY. (2018) “Structural Analysis of Redox-sensing Transcriptional Repressor Rex from Thermotoga maritima.” Sci Rep. 8(1):13244. PMID: 30185822

 

Joo HK, Park YW, Jang YY, Lee JY. (2018) “Structural Analysis of Glutamine Synthetase from Helicobacter pylori.” Sci Rep. 8(1):11657. PMID: 30076387


Yeo HK, Park YW, Lee JY (2017) “Structural basis of operator sites recognition and effector binding in the TetR family transcription regulator FadR.” Nucleic Acids Res. 45(7):4244-4254. PMID: 28160603 

 

Choi, Y.M., Yeo, H.K., Park, Y.W. and Lee, J.Y. (2016) “Structural Analysis of Thymidylate Synthase from Kaposi's Sarcoma-Associated Herpesvirus with the Anticancer Drug Raltitrexed” PLoS One. 11(12):e0168019. PMID: 27936107 

 

Park, Y.W., Kang J., Yeo, H.K. and Lee, J.Y. (2016) “Structural Analysis and Insights into the Oligomeric State of an Arginine-Dependent Transcriptional Regulator from Bacillus halodurans” PLoS One. 11(5):e0155396. PMID: 27171430 

 

Park, Y.W., Yeo, H.K. and Lee, J.Y. (2014) “Structural Analysis of the NH3-dependent NAD+ Synthetase from Deinococcus radiodurans” Bull. Korean Chem. Soc. 35, 2863-2866. Reference

 

Yeo, H.K. and Lee, J.Y. (2014) “Structural analysis and insight into metal ion activation of the iron-dependent regulator from Thermoplasma acidophilum” Acta Crystallographica D70, 1281-1288. PMID: 24816097 

 

Yeo, H.K. and Lee, J.Y. (2012) “Crystallization and preliminary X-ray diffraction analysis of a fatty-acid metabolism regulatory protein, FadR, from Bacillus halodurans” Acta Crystallographica F68, 975-977.

 

Biertümpfel C., Zhao Y., Kondo Y., Ramón-Maiques S., Gregory M., Lee J.Y., Masutani C., Lehmann A.R., Hanaoka F, Yang W. (2010) “Structure and mechanism of human DNA polymerase η” Nature, 465, 1044-1048.

 

Yeo, H.K. and Lee, J.Y. (2009) “Crystal structure of Saccharomyces cerevisiae Ygr203w, a homolog of single-domain rhodanese and Cdc25 phosphatase catalytic domain” Proteins. 76, 520-524.

 

Lee, J.Y. and Yang, W. (2006) “UvrD helicase unwinds DNA one base pair at a time by a two-part power stroke.” Cell. 127, 1349-1360.

 

Lee, J.Y., Chang, J., Joseph, N., Ghirlando, R., Rao, D.N., Yang ,W. (2005) “MutH Complexed with Hemi- and Unmethylated DNAs: Coupling Base Recognition and DNA Cleavage.” Mol. Cell. 20, 155-66. 

 

Lee, J.Y., Ahn, H.J., Ha, K.S., Suh, S.W. (2004) “Crystal structure of the TM1442 protein from Thermotoga maritima, a homolog of the Bacillus subtilis general stress response anti-anti-sigma factor RsbV”. Proteins. 56, 176-9. 

 

Lee, J.Y., Kwak, J. E., Moon, J., Eom, S. H., Liong, E. L., Pedelacq, J.-D., Berendzen, J., and Suh, S. W. (2001) “Crystal structure and functional analysis of the surE protein identify a novel phosphatase family”. Nature Struct. Biol. 8, 789-794. 

 

Lee, J.Y., Chang, C., Song, H. K., Moon, J., Yang, J.K., Kim, H.-K., Kwon, S.-T., and Suh, S.W. (2000) Crystal structure of NAD+-dependent DNA ligase: modular architecture and functional implications. EMBO. J. 19(5), 1119-1129. 

 

Lee, J.Y., Min, K., Cha, H., Shin. D.H., Hwang, K.Y., and Suh, S.W. (1998) Rice non-specific lipid transfer protein: 1.6 Å crystal structure in the unliganded state reveals a small hydrophobic cavity. J. Mol. Biol. 276, 437-448.