DOM Background-References

Colin A. Stedmon (taken from Ph.D. thesis introduction chapter (2004)

Aitkenhead-Peterson, J.A., W.H. McDowell and J.C. Neff. 2003. Sources, production and regulation of allochthonous dissolved organic matter inputs to surface waters. In Findlay, S.E.G. and Sinsabaugh, R.L. (Eds.): Aquatic Ecosystems: Interactivity of dissolved organic matter. Aquatic Ecology Series, Academic Press, USA, p26-70.

Benner, R., Pakulski, J.D., McCarthy, M., Hedges, J.I., and Hatcher, P.G. 1992. Bulk chemical characterisation of dissolved organic matter in the ocean. Science, 255:1561-1564.

Benner, R., and Biddanda, B. 1998. Photochemical transformations of surface and deep marine dissolved organic matter: Effects on bacterial growth. Limnology & Oceanography 43:1373-1378.

Benner, R. 2002. Chemical composition and reactivity. In Hansell, D.A. and Carlson, C.A., (Eds.): Biogeochemistry of Marine Dissolved Organic Matter. Academic Press, USA, pp59-90.

Benner, R. 2003. Molecular indicators of bioavailability of dissolved organic matter. In Findlay, S.E.G. and Sinsabaugh, R.L. (Eds.): Aquatic Ecosystems: Interactivity of dissolved organic matter. Aquatic Ecology Series, Academic Press, USA,p121-137.

Berman, T., and Bronk, D. 2003. Dissolved organic nitrogen: a dynamic participant in aquatic ecosystems. Aquatic Microbial Ecology, 31:279-305.

Bjørnsen, P.K. 1988. Phytoplankton exudation of organic matter: Why do healthy cells do it? Limnology and Oceanography, 33:151-154.

Blough, N.V., and Del Vecchio, R. 2002. Chromophoric DOM in the Coastal Environment. In Hansell, D.A. and Carlson, C.A., (Eds.) Biogeochemistry of Marine Dissolved Organic Matter. Academic Press, USA, pp 509-546.

Blough, N.V., and Zepp, R.G. 1995. Reactive Oxygen Species in Natural Waters. In Foote, C.S., Pacentine, J.S., Greenberg, A., and Liebman, J.F. (Eds.) Active Oxygen Chemistry, p280-333. Chapman and Hall, New York.

Bricaud, A., Morel, A., and Prieur, L. 1981. Absorption by dissolved organic matter of the sea (yellow substance) in the UV and visible domains. Limnology and Oceanography 26, 43-53.

Bro, R., 1997. PARAFAC. Tutorial and applications. Chemometrics and Intelligent Laboratory Systems, 38:149-171.

Brown, M. 1977 High molecular-weight material in Baltic seawater. Marine Chemistry, 3:253-258.

Burdige, D.J., Alperin, M.J., Holmstead, J., and Martens, C.S. 1992. The role of benthic fluxes of dissolved organic carbon in oceanic and sedimentary carbon cycling. Geophysical Research Letters, 19: 1851-1854.

Carder, K.L., Steward, R.G., Harvey, G.R. & Ortner, P.B. 1989. Marine humic and fulvic acids: Their effects on remote sensing of ocean chlorophyll. Limnology and Oceanography 34:68-81.

Chin, W-C., Orellana, M.V., and Verdugo, P. 1998. Spontaneous assembly of marine dissolved organic matter into polymer gels. Nature, 391:568-572.

Chin, Y.P., Aitken, G., and O’Loughlin, E. 1992. Molecular-weight, polydispersity and spectroscopic properties of aquatic humic substances. Environmental Science and Technology 28:1853-1858.

Coble, P.G., Green, S.A., Blough, N.V., and Gagosian, R.B. 1990. Characterisation of dissolved organic matter in the Black Sea by fluorescence spectroscopy. Nature 348:432-435.

Coble, P.G. 1996. Characterisation of marine and terrestrial DOM in seawater using excitation-emission matrix spectroscopy. Marine Chemistry, 51:325-346.

Druffel, E.R.M., Williams, P.M., and Suzuki, Y. 1989. Concentrations and radiocarbon signatures of dissolved organic matter in the Pacific Ocean. Geophysical Research Letters, 97:15639-15,659.

Duursma, E.K. 1961. Dissolved organic carbon, nitrogen and phosphorous in the sea. Netherlands Journal of Sea Research, 1:1-147.

Fogg, G.E. 1983. The ecological significance of extracellular products of phytoplankton photosynthesis. Bot. Mar. 26:3-14.

Forsgren, G., Jansson, M., and Nilsson, P. 1996. Aggregation and sedimentation of iron, phosphorous and organic carbon in experimental mixtures of freshwater and estuarine water. Estuarine Coastal and Shelf Science, 43:259-268

Gobler, C.J., Hutchins, D.A., Fisher, N.S., Cosper, E.M., and Sanudo-Wilhelmy, S.A. 1997. Release and bioavailability of C, N, P, Se, and Fe following viral lysis of marine chrysophyte. Limnology and Oceanography, 42:1492-1504.

Gu, B.H, Mehlhorn, T.L., Liang, L.Y., and McCarthy, J.F. 1996a. Competitive adsorption, displacement and transport of organic matter on iron oxide. 1. Competitive adsorption. Geochimica et Cosmochimica Acta:60, 1943-1950.

Gu, B.H, Mehlhorn, T.L., Liang, L.Y., and McCarthy, J.F. 1996b. Competitive adsorption, displacement and transport of organic matter on iron oxide. 2. Displacement and transport. Geochimica et Cosmochimica Acta:60, 2977-2992.

Harvey, G.R., Boran, D.A., Chesal, L.A., and Tokar, J.M. 1983. The structure of marine fulvic and humic acids. Marine Chemistry, 12: 119-132.

Hedges, J.I. 2002. Why dissolved organics matter? In Hansell, D.A. and Carlson, C.A., (Eds.) Biogeochemistry of Marine Dissolved Organic Matter. Academic Press, USA. , pp1-34.

Hedges, J.I, Keil, R.G, and Benner, R. 1997. What happens to terrestrial organic matter in the ocean? Organic Geochemistry, 27:195-212.

Jerlov, N.G. 1968 Optical Oceanography. Oceanography Series 5. Elsevier Pub. Co., Amsterdam.

Jumars, P.A., Penry, D.L., Baros, J.A., Perry, M.J., and Frost, B.W. 1989. Closing the microbial loop: Dissolved carbon pathway to heterotrophic bacteria from incomplete ingestion, digestion and absorption in animals. Deep Sea Research, 36:483-495.

Kalle, K. 1966. The problem of gelbstof in the sea. Oceanography and Marine Biology Annual Review, 4:91-104.

Karl, D.M., and Björkman, K.M. 2000. Dynamics of DOP. In Hansell, D.A. and Carlson, C.A., (Eds.) Biogeochemistry of Marine Dissolved Organic Matter. Academic Press, USA, pp250-366.

Kerner, M., Hohenberg, H., Ertl, S., Reckermann, M. and Spitzy A. 2003. Self-organisation of dissolved organic matter to micelle-like microparticles in river water. Nature 422:150-154.

Kirk, J.T.O. 1994. Light and photosynthesis in aquatic systems. Cambridge University Press, pp509.

Malcolm, R.L. and McCarthy, P. 1992. Quantitative evaluation of XAD-8 and XAD-4 resins used in tandem for removing organic solutes from water. Environment International 18:597-607.

Markager, S. and Vincent, W. 2000. Spectral light attenuation and the absorption of UV and blue light in natural waters. Limnology and Oceanography, 45:643-650.

McKnight, D.M., Boyer, E.W., Westerhoff, P.K., Doran, P.T., Kulbe, T., Andersen, D.T. 2001. Spectrofluorometric characterisation of dissolved organic matter for indication of precursor organic material and aromaticity. Limnology and Oceanography, 46:38-48.

Miller, W.L., and Zepp, R.G. 1995. Photochemical production of dissolved inorganic carbon from terrestrial organic matter: Significance to the oceanic organic carbon cycle. Geophysical Research Letters, 22:417-420.

Moran, M.A., Pomeroy, L.R., Sheppard, E.S., Atkinson, L.P., and Hodson, R. 1991. Distribution of terrestrially derived dissolved organic matter on the south-eastern U. S. continental shelf. Limnology and Oceanography, 36:1134-1149.

Moran, M.A., and Zepp, R.G. 1997. Role of photoreactions in the formation of biologically labile compounds from dissolved organic matter. Limnology and Oceanography, 42:1307-1316.

Mulholland, P. J. 1981. Formation of particulate organic carbon in water from a south-eastern swamp-stream. Limnology and Oceanography, 26:790-795.

Nagata, T. 2000. Production mechanisms of dissolved organic matter. In Kirchman, D.L. Ed. Microbial Ecology of the Oceans, pp.121-152. Wiley-Liss, New York.

Opsahl, S. and Benner, R. 1997. Distribution and cycling of terrigenous dissolved organic matter in the ocean. Nature, 386:480-482.

Opsahl, S., Benner, R., and Amon, R.W. 1999. Major flux of terrigenous dissolved organic matter through the Arctic Ocean. Limnology and Oceanography, 44:2017-2023.

Powell, R. T., Landing, W. M., and Bauer, J. E. 1996. Colloidal trace metals, organic carbon and nitrogen in a south-eastern U.S. estuary. Marine Chemistry, 55:165-176.

Siegenthaler, U. and Sariento, J.L. 1993. Atmospheric carbon dioxide and the ocean. Nature, 365:119-125.

Sharp, J.H., 1973. Size classes of organic carbon in seawater. Limnology and Oceanography, 18: 441-447.

Sholkovitz, E. R. 1976. Flocculation of dissolved organic and inorganic matter during the mixing og river water and seawater. Geochimica Cosmochimica Acta 40:831-845.

Sholkovitz, E. R., Boyle, E. A., and Price, N. B. 1978. The removal of dissolved humic acids and iron during estuarine mixing. Earth and Planetary Science Letters, 40:130-136.

Stedmon, C.A., Markager, S.S., Søndergaard, M., Vang, T., Laubel, A.R., Borch, N.H. & Windelin, A. (2006): Dissolved Organic Matter (DOM) Export to a Temperate Estuary: Seasonal Variations and Implications of Land Use. - Estuaries and Coasts 29(3): 388-400.

Stedmon, C.A. & Markager, S.S. (2005): Resolving the variability in dissolved organic matter fluorescence in a temperate estuary and its catchment using PARAFAC analysis. - Limnology and Oceanography 50(2): 686-697.

Stedmon, C.A. & Markager, S.S. (2005): Tracing the production and degradation of autochthonous fractions of dissolved organic matter by fluorescence analysis. - Limnology and Oceanography 50(5): 1415-1426.

Søndergaard, M., Stedmon, C.A. & Borch, N.H. (2004): Fate of terrigenous dissolved organic matter (DOM) in estuaries. Aggregation and bioavailability. - Ophelia 57(3): 161-176.

Stedmon, C.A. & Markager, S.S. (2003): Behaviour of the optical properties of coloured dissolved organic matter under conservative mixing. - Estuarine Coastal and Shelf Science 57: 973-979.

Stedmon, C.A., Markager, S.S. & Bro, R. (2003): Tracing dissolved organic matter in aquatic environments using a new approach to fluorescence spectroscopy. - Marine Chemistry 82: 239-254.

Stedmon, C.A. & Markager, S. (2001): The Optics of Chromophoric Dissolved Organic Matter (CDOM) in the Greenland Sea: An Algorithm for Differentiation between Marine and Terrestrially Derived Organic Matter. - Limnology and Oceanography 46(8): 2087-2093.

Stedmon, C.A., Markager, S. and Kaas, H. 2000. Optical properties and signatures of chromophoric dissolved organic matter (CDOM) in Danish Coastal waters. Estuarine Coastal and Shelf Science, 51, 267-278.

Tassan, S. 1988. The effect of dissolved yellow substance on the quantitative retrieval of chlorophyll and total suspended sediment concentration from remote measurements of water colour. International Journal of Remote Sensing 9:787-797.

Tranvik, L.J., and Jørgensen, N.O.G. 1995. Colloidal and dissolved organic matter in lake water: Carbohydrate and amino acid composition, and ability to support bacterial growth. Biochemistry 30:77-97.

Tranvik, L.J., and Bertilsson, S. 2000. Contrasting effects of solar UV radiation on dissolved organic sources for bacterial growth. Ecology Letters, 4:458-463.

Tranvik, L., and Kokalj, S. 1998. Decreased biodegradability of algal DOC due to interactive effects of UV radiation and humic matter. Aquatic Microbial Ecology, 14:301-307.

Thurman, E.M., 1985. Organic geochemistry of natural waters. Junk Publishers. Dordrecht. 497p.

Weis, M. and Simon, M. 1999. Consumption of labile dissolved organic matter by limnitic bacterioplankton: the relative significance of amino acids and carbohydrates. Aquatic Microbial Ecology, 17,1-12.

Wells, M.L., and Goldberg, E.D. 1993. Colloid aggregation in seawater. Marine Chemistry, 41, 353-358.

Wetzel, R.G., Hatcher, P.G., and Bianchi, T.S. 1995. Natural photolysis by ultraviolet irradiance of recalcitrant dissolved organic matter to simple substrates for rapid bacterial metabolism. Limnology and Oceanography, 40:1369-1380.

Williams, P. le B. 2000. Heterotrophic bacteria and the dynamics of dissolved organic material. In Kirchman, D.L. (Ed.) Microbial Ecology of the Oceans, pp153-200. Wiley-Liss, New York.

Williams, P. le B. 1995. Evidence for the seasonal accumulation of carbon-rich dissolved organic material, its scale in comparison with changes in particulate material and the consequential effect on net C/N assimilation ratios. Marine Chemistry, 51, 17-29.

Zika, R.G. (1981). Marine organic photochemistry. In Duursma, E.K. and Dawson, R. (Eds.) Marine Organic Chemistry, p299-325, Elsevier Science, Amsterdam.

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This text is taken from my Ph.D. thesis introduction chapter (2004).