Publications
24. Laccase and Its Mutant Displayed on the Bacillus subtilis Spore Coat for Oxidation of Phenolic Compounds in Organic Solvents, S. Sheng and E. T. Farinas, Catalysts, 2021, 11,606
23. Nanocarbon immobilized membranes for generating bacteria and endotoxin free water via membrane distillation. Gupta, I., Chakraborty, J., Roy,S., Farinas, E.
& Mitra, S., Mar 15 2021, In: Separation and Purification Technology. 259, 118133.
22. 1. Kum-Biocca H.H., Farinas. E. T., Mistry N., Wan Y., Molecular Augmented Reality for Design and Engineering (MADE): Effectiveness of AR Models on Discovery, Learning, and Education. In 22nd International Conference, HCII 2020, Stephanidis C., A. M., Ntoa S., Ed. Springer Nature Switzerland AG: Copenhagen, Denmark, 2020; Vol. 1294, pp 173-180
21. Engineering 2-oxoglutarate dehydrogenase to a 2-oxoaliphatic dehydrogenase complex by optimizing consecutive components. Joydeep Chakraborty, Natalia S. Nemeria, Xu Zhang, Pradeep R. Nareddy, Michal Szostak, Edgardo Farinas*, Frank Jordan* AIChE Journal, e16769, 2019;https://doi.org/10.1002/aic.16769
20. Catalysis of transthioacylation in the active centers of dihydrolipoamide acyltransferase components of 2-oxo acid dehydrogenase complexChakraborty, J., Nemeria, N.S., Farinas, E., Jordan, F. FEBS Open Bio , 2018, 8 (6) 880-896.
19. Engineering CotA Laccase for Acidic pH Stability using Bacillus subtilis Spore Display, Silu Sheng, Han Jia, Sidney Topiol, Edgardo T. Farinas*, J. Microbiol. Biotechnol. Vol 27 (3), 507–513, 2017; https://doi.org/10.4014/jmb.1608.08026
18. Han Jia, Frederick S. Lee, and Edgardo T. Farinas. Bacillus subtilis Spore Display of Laccase for Evolution under Extreme Conditions of High Concentrations of Organic Solvent, ACS Combinatorial Science, vol 16, 2014, no 12, 665-669. (peer)
17. Hetalben Patel, Da Jeong Shim,
Edgardo T. Farinas, Frank Jordan. Investigation of the donor and acceptor range for
chiral carboligation catalyzed by the E1 component of the 2-oxoglutarate
dehydrogenase complex. Journal of Molecular Catalysis B: Enzymatic, vol 98, 2013, 42-45. (peer)
16. Da Jeong Shim, Natalia S. Nemeria, Anand Balakrishnan, Hetalben Patel, Jaeyoung Song, Junjie Wang, Frank Jordan, and Edgardo T. Farinas. Assignment of Function to Histidines 260 and 298 by Engineering the E1 Component of the Escherichia coli 2-OxoglutarateDehydrogenase Complex; Substitutions That Lead to Acceptance of Substrates
Lacking the 5-Carboxyl Group. Biochemistry, vol 50, 2011, 7705-7709, DOI: 10.1021/bi200936n. http://pubs.acs.org/journal/bichaw (peer).
15. Nirupama Gupta and Edgardo T. Farinas, Directed evolution of CotA laccase for increased substrate specificity using Bacillus subtilis spores. Protein Engineering, Design, & Selection, vol 23, no 8, 2010, 679-682 (peer)
14. Nirupama Gupta, Frederick S. Lee and Edgardo T. Farinas, Laboratory Evolution of Laccase for Substrate Specificity, Journal of Molecular Catalysis B: Enzymatic, vol 62, no 3-4 2009, 230-234 (peer)
13. Nirupama Gupta and Edgardo T. Farinas, Narrowing Laccase Substrate Specificity Using Active Site Saturation Mutagenesis, Combinatorial Chemistry and High Throughput Screening, vol 12, no 3, 2009, 269-274 (peer).
This manuscript is featured on the journal cover.
12. Miguel Alcalde*, Edgardo T. Farinas*, Frances H. Arnold. Colorimetric high-throughput assay for alkene epoxidation catalyzed by cytochrome P450BM-3 variant 139-3 Journal of Biomolecular Screening, vol 9, no 2, 2004, 141-146 (peer).
*These author contributed equally
11. Edgardo T. Farinas, Miguel Alcalde, and Frances Arnold. Alkene epoxidation catalyzed by cytochrome P450 BM-3 139-3. Tetrahedron, vol 60, no 3, 2003, 525-528 (peer).
10. Anton Glieder*, Edgardo T. Farinas*, Frances H. Arnold. Laboratory Evolution of a soluble, self-sufficient, highly active alkane hydroxylase. Nature Biotechnology, vol 20, no 11, 2002, 1135-1139 (peer).
*These author contributed equally
9. Edgardo T. Farinas, Ulrich Schwaneberg, Anton Glieder, Frances H. Arnold. Directed Evolution of a Cytochrome P450 Monooxygenase for Alkane Oxidation. Advanced Synthesis and Catalysis, vol 343, no 6-7, 2001, 601-606 (peer).
8. Ulrich Schwaneberg, Christopher Otey, Patrick C. Cirino, Edgardo Farinas, and Frances H. Arnold.Cost-effective Whole-cell assay for Laboratory Evolution of Hydroxylases in Escherichia coli. Journal of Biomolecular Screening, vol 6, no 2, 2001, 111-118 (peer).
7. Edgardo T. Farinas and Lynne Regan. The de novo design of a Rubredoxin-like Fe site. Protein Science, vol 7, no 9, 1998,1939-1946 (peer).
6. Edgardo T. Farinas, Cattien Nguyen, and Pradip K. Mascharak Photoinduced Oxidation of Hydrocarbons with Cobalt(III)-alkylperoxy Complexes. Inorganica Chimica Acta, vol 263, no 1-2, 1997, 17-21 (peer).
5. Edgardo T. Farinas, Jennifer D. Tan, and Pradip K. Mascharak. Photoinduced DNA Cleavage Reactions by Designed Analogues of Co(III)-Bleomycin, The Metalated
Core is the Primary Determinant of Sequence Specificity. Inorganic Chemistry, vol 35, no 9, 1996, 2637-2543 (peer).
4. Richard J. Guajardo, Ferman Chavez, Edgardo T. Farinas, and Pradip K. Mascharak.Structural Features that Control Oxygen Activation at the Non-Heme Iron Site in
Fe(II)-Bleomycin: An Analogue Study. Journal of the American Chemical Society, vol 117, no 13, 1995, 3883-3884 (peer).
3. Edgardo T. Farinas, Narayan Baidya and Pradip K. Mascharak. Electron Paramagnetic Resonance Studies on the Formation and Decomposition of the
Oxygenated Product of [CoII(PMA)]+, a Synthetic Analogue of Co(II)-Bleomycin. Inorganic Chemistry vol 33, no 25, 1994, 5970-5973 (peer).
2. Jennifer D. Tan, Edgardo T. Farinas, Sheila S. David, and Pradip K. Mascharak. NMR Evidence of Sequence Specific DNA Binding by a Co(III)-Bleomycin Analogue
with Tethered Acridine. Inorganic Chemistry , vol 33, no 19, 1994, 4295-4308 (peer).
1. Edgardo T. Farinas, Jennifer D. Tan, Narayan Baidya, and Pradip K. Mascharak.A Designed Synthetic Analogue of Co(III)-Bleomycin with Enhanced DNA-Binding and
Photocleaving Activity Journal of the American Chemical Society, vol 115, no 7, 1993, 2996-2997 (peer).