Selected Journal Publications
1. Yan Zhuang, Luxia Zhang, Xiyuan Gao, Zon-Yin Shae, Jeffrey J. P. Tsai, Pengfei Li, Chi-Ren Shyu, "Re-Engineering Clinical Trial Management System Using Blockchain Technology: System Design, Development, and Case Studies" JMIR (2022)
2. Zon-Yin Shae, Jeffrey J.P. Tsai, “A Clinical Kidney Intelligence Platform Based on Big Data, Artificial Intelligence, and Blockchain Technology”, International Journal on Artificial Intelligence Tools, 30th anniversary special issue, (2022).
3. Prayitno, Chi-Ren Shyu, Karisma Trinanda Putra, Hsing-Chung Chen, Yuan-Yu Tsai, K. S. M. Tozammel Hossain, Wei Jiang, Zon-Yin Shae, “A Systematic Review of Federated Learning in the Healthcare Area: From the Perspective of Data Properties and Applications”, Appl. Sci. 11(23), (2021)
4. Karisma Trinanda Putra, Hsing-Chung Chen, Prayitno, Marek R. Ogiela, Chao-Lung Chou, Chien-Erh Weng, Zon-Yin Shae:, “Federated Compressed Learning Edge Computing Framework with Ensuring Data Privacy for PM2.5 Prediction in Smart City Sensing Applications”. Sensors 21(13): 4586 (2021)
5. Y. Zhuang, L. R. Sheets, Y. -W. Chen, Z. -Y. Shae, J. J. P. Tsai and C. -R. Shyu, "A Patient-Centric Health Information Exchange Framework Using Blockchain Technology," in IEEE Journal of Biomedical and Health Informatics, vol. 24, no. 8, pp. 2169-2176, (2020)
6. Yan Zhuang, Yin-Wu Chen, Zon-Yin Shae, Chi-Ren Shyu, “Generalizable Layered Blockchain Architecture for Healthcare Applications – Case Studies in Health Information Exchange and Clinical Trial Recruitment" Journal of Medical Internet Research, 22(7). (2020)
7. Yan Zhuang, Lincoln R. Sheets, Yin-Wu Chen, Zon-Yin Shae, Jeffrey J.P. Tsai, Chi-Ren Shyu, “A Patient-Centric Health Information Exchange Framework Using Blockchain Technology. IEEE Journal of Biomedical and Health Informatics” JBHI, (2020)
8. Jun-Jun Yeh1, Shih-Hue Syue, Cheng-Li Lin5,, Chung Y. Hsu, Zonyin Shae and Chia-Hung Kao, “Statin use and Vital Organ Failure in Patients With Asthma–Chronic Obstructive Pulmonary Disease Overlap: A Time-Dependent Population-Based Study,” Front. Pharmacol. (2019)
9. Li-Min Sun, Cheng-Li Lin, Sean Sun, Chung Y. Hsu, Zonyin Shae, and Chia-Hung Kao, “Long-Term Use of Tamoxifen Is Associated With a Decreased Subsequent Meningioma Risk in Patients With Breast Cancer: A Nationwide Population-Based Cohort Study,” Front Pharmacol. (2019)
10. Yeh JJ, Syue SH, Lin CL, Hsu CY, Shae Z, Kao CH., “Effects of statins on anxiety and depression in patients with asthma-chronic obstructive pulmonary disease overlap syndrome,” Journal Of Affect Disorders. (2019)
11. Yeh JJ1, Lin CL, Hsu CY, Shae ZY, Kao CH, “Association between neurodegenerative diseases and pneumonia: a retrospective population-based study,” Curr Med Res Opin. (2019)
12. Yeh JJ, Lin CL, Hsu CY, Shae Z, Kao CH., “Associations between statins and coronary artery disease and stroke risks in patients with asthma-chronic obstructive pulmonary disease overlap syndrome: A time-dependent regression study,” Atherosclerosis. (2019)
13. Zon-yin shae, Xiangliang Zhang, Hani Jamjoon, “Analysis and Modeling of Social Influence in High Performance Computing Workloads,” CoRR : Computing Research Repository - arXiv. (2016)
14. Moustafa AbdelBaky, Manish Parashar, Hyunjoo Kim, Kirk E. Jordan, Vipin Sachdeva, James Sexton, Hani Jamjoom, Zon-Yin Shae, Gergina Pencheva, Reza Tavakoli, Mary F. Wheeler. “Enable High-Performance Computing as a Service,” IEEE Computer, 45(10):72-80. (2012)
15. Xiaohui Gu, Zhen Wen, Philip S. Yu, Zon-Yin Shae, “peerTalk: A Peer-to-Peer Multiparty Voice-Over-IP System. IEEE Transactions on Parallel and Distributed Systems,” Vol. 19, Issue 4. (2008)
16. Aameek Singh, Arup Acharya, Priya Mahadevan, Zon-Yin Shae, “SPLAT: A Unified SIP Services Platform for VoIP Applications,” International Journal of Communication System (IJCS). (2006)
17. Hong Yan, Kunwadee Sripanidkulchai, Hui Zhang, Zonyin Shae, Denabjan Saha, “Information Leak Vulnerability in SIP Implementation,” IEEE Network Magazine. (2006)
18. Raymond Jennings, Erich Nahum, David Olshefski, Debanjan Saha, Zon-Yin Shae, Chris Waters, “A Study of Internet Instant Messaging and Chat Protocols,” IEEE Network Managing. (2006)
Selected Book Publications
1. YW Chen, ZY Shae. Application Of Omics, Ai And Blockchain In Bioinformatics Research, (one chapter) Blockchain for Pre-clinical and Clinical Platform with Big Data . world Scientific Publishing. Oct, 2019.
Selected Conference Publications
1. Lokesh Karanam, Kun Yi, Zon-Yin Shae, David Chang, Chi-Ren Shyu, K.S.M. Tozammel Hossain, “Continuous Anticipation of AKI in the ICU using Time-Gated LSTMs,” AMIA, (2022)
2. Zon-Yin Shae, Jeffrey J.P. Tsai, “On the Design of Medical Data Ecosystem for Improving Healthcare Research and Commercial Incentive,” CogMi (2021)
3. Yan Zhuang, Lincoln R. Sheets, Zon-Yin Shae, Yin-Wu Chen, Jeffrey J P Tsai, Chi-Ren Shyu, “Development of A Blockchain Framework for Virtual Clinical Trials”, Proceedings of the AMIA 2020 Annual Symposium. November, San Francisco (2020).
4. Zon-Yin Shae, Jeffrey J.P. Tsai, “Deep Learning Mechanism for Pervasive Internet Addiction Prediction,” The Second IEEE International Conference on Cognitive Machine Intelligence. (2020)
5. Kappeta Uma, Zhi-Ren Tsai, Zon-Yin Shae, Hui-Chen Ko, Jeffrey J.P. Tsai, “Analysis and application of autoencoders' features from addiction data of questionnaire,” The ninth International Multi-Conference on Engineering and Technology Innovation IMETI, (2020).
6. Kun-Yi Chen, Chi-Yu Chang, Zhi-Ren Tsai, Chun-Ting Lee, Zon-Yin Shae, “Tea Verification Using Triplet Loss Convolutional Network,” (Honorable Mention), The 9th International Multi-Conference on Engineering and Technology Innovation IMETI, (2020)
7. Zon-Yin Shae, Zhi-Ren Tsai, Chi-Yu Chang, Jeffrey J.P. Tsai, “Random Sampling Deep Learning Mechanism for Discovering Unique Property of No Specific Local Feature Images,” CogMI 2019 - First IEEE International Conference on Cognitive Machine Intelligence, LA, California, USA. (2019)
8. Zhuang, Y., Sheets, L., Shae, Z., Chen, Y. W., Tsai, J., & Shyu, C. R, “Applying Blockchain Technology to Enhance Clinical Trial Recruitment,” AMIA 2019 Annual Symposium, Washington D.C. (2019)
9. Hsing-Chung Chen, Bambang Irawan, Chieh-Yang Shih, Damarjati, Zon-Yin Shae, Fengming Chang, “A Samrt Contract to Facilitate Goods Purchasing Based on Online Haggle,” IMIS 2019, Sydney, Australia. (2019)
10. Zonyin Shae, Jeffrey J.P. Tsai, “AI Blockchain Platform for Trusting News,” ICDCS 2019, Dallas, Texas, USA. (2019)
11. Zhuang Y, Sheets L, Shae Z, Tsai JJP, Shyu CR, “Applying Blockchain Technology for Health Information Exchange and Persistent Monitoring for Clinical Trials,” AMIA 2019 Annual Symposium, San Francisco. (2019)
12. Hsing-Chung Chen, Bambang Irawan, Zon-Yin Shae, “A Cooperative Evaluation Approach Based on Blockchain Technology for IoT Application,” The 12th International Conference on Innovative Mobile and Internet Services in Ubiquitous Computing (IMIS-2018), Matsue, Japan. (2018)
13. Zonyin Shae, Jeffrey J.P. Tsai, “Transform Blockchain into Distributed Parallel Computing Architecture for Precision Medicine,” ICDCS 2018 38th IEEE International Conference on Distributed Computing Systems. (2018)
14. Yan Zhuang, Andrea Atkins, Chi-Ren Shyu, Zonyin Shae, Jeffrey J.P. Tsai, Chung Hsu, “A Hybrid Blockchain Design for Patient Recruitments and Persistent Monitoring for Clinical Trials,” IEEE Standards Association: Blockchain for clinical trials. (2018)
15. Jyh-Horng Wen, Fang-Yu Chang, Yung-Fa Huang, Hsing-Chung Chen, Zon-Yin Shae, “Performance of Sub-optimal Searching Algorithms on PTS Phase Selections for PAPR Reduction,” The 2017 International Symposium on Mobile Internet Security (MobiSec2017), Jeju Island, Republic of Korea. (2017)
16. Zonyin Shae, Jeffrey J.P. Tsai, “On the Design of a Blockchain Platform for Clinical Trial and Precision Medicine,” The 37th IEEE International Conference on Distributed Computing Systems (ICDCS), Atlanta, GA, USA. (2017)
17. John Walz, David_Alan, Murugesan:San, Zonyin Shae, Liang:Shuo_Pen, “Panel: IT in Practice: Status and Challenges,” COMPSAC 2015: The 39th Annual International Computers, Software & Applications Conference.(2015)
18. Dinesh Kumar, Zon-Yin Shae, Hani Jamjoom, “Scheduling Batch and Heterogeneous Jobs with Runtime Elasticity in a Parallel Processing Environment,” IEEE 26th International Parallel and Distributed Processing Symposium Workshops & PhD Forum. (2012)
19. Xiangliang Zhang, Zon-Yin Shae, Shuai Zheng, Hani Jamjoom, “Virtual machine migration in an over-committed cloud,” NOMS (2012).
20. Shuai Zheng, Zon-Yin Shae, Xiangliang Zhang, H. Jamjoom, L. Fong, “Analysis and Modeling of Social Influence in High Performance Computing Workloads. EURO-PAR,” The 17th International European Conference on Parallel and Distributed Computing (2011)