2025
Song, Y*., Zhang, Q., Shen, C. Editorial: Eutrophication, Algal Blooms, and Hypoxia in Lakes and Reservoirs: Perspectives on Addressing Water Quality Degradation. Frontiers in Water, 7, 1740416. (Link)
Song, Y*. (2025). Forecasting short-term Chlorophyll a concentration in Lake Erie using the machine learning XGBoost algorithm. Environmental Research Letters, 620, 129375. (DOI: 10.1088/1748-9326/add6b7).
Shen, C.Q., Testa, J.M., Song, Y. (2025). Potential impacts of invasive mussels on long-term carbonate chemistry changes in Lake Michigan. Journal of Oceanology and Limnology. (DOI: 10.1007/s00343-025-4321-z).
Song, Y*., Shen, C.Q., Hong, Y. (2025). Comparing the performance of 10 machine learning models in predicting Chlorophyll a in western Lake Erie. Journal of Environmental Management, 380, 125007. (DOI: 10.1016/j.jenvman.2025.125007).
Song, Y*., Fujisaki-Manome, A., Barker, H.C., MacFadyen, A., Titze, D., Kessler, J., Wang, J. (2025). Introducing a simple convex hull method to calibrate diffusion coefficients in Lagrangian particle models. Ocean Engineering, 316, 119926. (DOI: 10.1016/j.oceaneng.2024.119926).
2024
Song, Y*., Fujisaki-Manome, A., Barker, H. C., MacFadyen, A., Titze, D., Kessler, J., Wright, M. D., Wang, J. (2024). Oil spill modeling in the Great Lakes: The critical impact of ice cover. IAGLR Lakes Letter (Invited feature article).
Shen, C.Q., Qian, M.T., Song, Y., Chen, B.S., Yang, J. (2024). Surface pCO2 and air-water CO2 fluxes dominated by submerged aquatic vegetation: Implications for carbon flux in shallow lakes. Journal of Environmental Management, 370, 122839. (DOI: 10.1016/j.jenvman.2024.122839).
Song, Y*., Fujisaki-Manome, A., Barker, H.C., MacFadyen, A., Kessler, J., Titze, D., Wang, J. (2024). Modeling study on oil spill transport in the Great Lakes: The unignorable impact of ice cover. Journal of Environmental Management, 358, 12810. (DOI: 10.1016/j.jenvman.2024.120810).
2023
Song, Y*. (2023). Hydrodynamic impacts on algal blooms in reservoirs and bloom mitigation using reservoir operation strategies: A review. Journal of Hydrology, 620, 129375. (DOI: 10.1016/j.jhydrol.2023.129375).
Song, Y*. (2023). Algal bloom prevention: Noteworthy public education. Global Ecology and Conservation, e02608. (DOI: 10.1016/j.gecco.2023.e02608).
Song, Y., Shen, C.Q., Wang, Y. (2023). Multi-objective optimal reservoir operation considering algal bloom control in reservoirs. Journal of Environmental Management, 344, 118436. (DOI: 10.1016/j.jenvman.2023.118436).
Song, Y*., Chen, M., Li, J., Zhang, L. L., Deng, Y., Chen, J. C. (2023). Can selective withdrawal control algal blooms in reservoirs? The underly hydrodynamic mechanism. Journal of Cleaner Production, 394, 136358. (DOI: 10.1016/j.jclepro.2023.136358).
Song, Y., You, L.H., Chen, M., Li, J., Zhang, L.L., Peng, T. (2023). Key hydrodynamic principles for controlling algal blooms using emergency reservoir operation strategies. Journal of Environmental Management, 325, 116470. (DOI:10.1016/j.jenvman.2022.116470).
2022
Chen, M., You, L.H., Zhang, L.L., Liao, N., Song, Y., Wang, H.W., Li, J. (2022). Mixing processes in a reservoir corresponding to different water level operations caused spatial differences during two phytoplankton bloom events. Journal of Hydrology, 612, 128139. (DOI:10.1016/j.jhydrol.2022.128139).
Li, M., Chen, Y., Zhang, F., Song, Y., Glibert, P.M., Stoecker, D.K. (2022). A three-dimensional mixotrophic model of Karlodinium veneficum blooms for a eutrophic estuary. Harmful Algae, 113, 102203. (DOI:10.1016/j.hal.2022.102203).
Li, W.J., Lei, Z.L., Wan, Y., Du, H.B., Song, Y. (2022). Ecological impact of ship lock on navigable river. Port & Waterway Engineering, 9, 92-98. In Chinese with English abstract. (DOI:10.16233/j.cnki.issn1002-4972.20220901.025).
2021
Song, Y., Shen, L., Zhang, L.L., Li, J., Chen, M. (2021). Study of a hydrodynamic threshold system for controlling dinoflagellate blooms in reservoirs. Environmental Pollution, 278, 116822. (DOI:10.1016/j.envpol.2021.116822).
2020
Glibert, P.M., Beusen, A.H.W., Bouwman, L., Burkholder, J.M., Flynn, K.J., Heil, C.A., Li, M., Lin, C.H.M., Madden, C.J., Mitra, A., Nardin, W., Silsbe, G., Song, Y., Zhang, F. (2020) Multifaceted climatic change and nutrient effects on harmful algae require multifaceted models[M]. De Gruyter. (DOI:10.1515/9783110625738-012).
2019
Chen, M., Zhang, L.L., Li J., Deng, Y., An, R.D., Song, Y., Yan, Z.L. (2019). Describing the daily vertical migration of a blooming freshwater dinoflagellate and simulating the bloom by coupling migration equation into ecological model. Proceedings of the 38th IAHR World Congress, ISSN 2521- 716X (Online), ISSN 2621-7119 (Print), 2691-2696. (DOI:10.3850/38WC092019-1067).
Qiao, J., Song, Y., Xia, H., Zhang, L.L. (2019). Research on comparison of FAY model and oil particle model for oil spill simulation in river-channel reservoirs. Yangtze River. 50(6): 29-33. In Chinese with English abstract. (DOI: 10.16232/j.cnki.1001-4179.2019.06.007).
2018
Song, Y., Zhang, L.L., Li, J., Chen, M., Zhang, Y.W. (2018). Mechanism of the influence of hydrodynamics on Microcystis aeruginosa, a dominant bloom species in reservoirs. Science of the Total Environment, 636, 230- 239. (DOI:10.1016/j.scitotenv.2018.04.257).
Song, Y., Zhang, L.L., Li, J., He, X.J., Chen, M., Deng, Y. (2018). High-potential accumulation and tolerance in the submerged hydrophyte Hydrilla verticillata (Lf) Royle for nickel-contaminated water. Ecotoxicology and Environmental Safety, 161, 553-562. (DOI:10.1016/j.ecoenv.2018.06.032).
Song, Y., He, X.J., Chen, M., Zhang, L.L., Li, J., Deng, Y. (2018). Effects of pH on the Submerged Macrophyte Hydrilla verticillata. Russian Journal of Plant Physiology, 65(4), 611-619. (DOI:10.1134/S1021443718040179).
Zhang, Y.W., Li, H., Li, J., Song, Y., Zhang, L.L., Li, Y., Pu, X.C., Huang, W.D. (2018). Spatiotemporal Succession Characteristics of Algal Functional Groups and Its Impact Factors for a Typical Channel-Type Reservoir in a Southwest Mountainous Area. Environmental Science, 39(6): 2680-2687. In Chinese with English abstract. (DOI:10.13227/j.hjkx.201709163).
2017
Song, Y., Zhang, L.L., Li, J., Chen, M., Zhang, Y.W. (2017). Experimental study on impacts of hydrodynamic condition on growth of Microcystis aeruginosa. Proceedings of the 37th IAHR World Congress, ISSN 1562- 6865 (Online), ISSN 1063-7710 (Print), 2575-2585.
2016
Song, Y., Zhang, L.L., Chen, M., Cai, J.C., Li, J. (2016). Impacts of flow velocity on growth of dominant species Microcystis aeruginosa of algae-bloom in reservoirs. Journal of Sichuan University (Engineering Science Edition), 48, 25-32. In Chinese with English abstract. (DOI:10.15961/j.jsuese.2016.s1.005).
Chen, M., Zhang, L.L., Tuo, Y.C., He, X.J., Li, J., Song, Y. (2016). Treatability thresholds for cadmium-contaminated water in the wetland macrophyte Hydrilla verticillata (Lf) Royle. Ecological Engineering, 96, 178-186. (DOI:10.1016/j.ecoleng.2016.03.017).
Song, Y., Fujisaki-Manome, A., Barker, C., McFayden, A., Kinner, NE., Kessler, J., Titze, D., Alloy, MM. (2024). Oil in ice modeling and risk analysis in the Great Lakes. International Oil Spill Conference, New Orleans, United States.
Song, Y., Fujisaki-Manome, A., Barker, C., Righi, D., Kessler, J., Titze, D., Wang, J. (2023). Advancing modeling capability of oil spill transport by considering ice cover in the Great Lakes. International Association for Great Lakes Research, Toronto, Canada.
Glibert, P. M., Li, M., Zhang, F., Song, Y., Lin, C. H. M., Ahn, S. H. (2020). Modeling mixotrophic Karlodinium veneficum in Chesapeake Bay. Ocean Science Meeting, San Diego, the United States.
Song, Y., Fujisaki-Manome, A., Titze, D., Wright, D., Kessler, J. (06. 2025). Validating surface currents for driving oil spill models in the Great Lakes. International Association for Great Lakes Research, Milwaukee, United States. (Oral presentation)
Song, Y. (04. 2025). Modeling and Control of Algal Blooms in Reservoirs and Lakes. Invited talk by Texas State University. (Oral presentation)
Song, Y., Fujisaki-Manome, A., Barker, C., McFayden, A., Titze, D., Wright, D., Kessler, J., Alloy, MM., Kinner, NE. (12. 2024). A new method to improve the interpolation accuracy of external forcings in the GNOME oil spill model. AGU2024 Conference, Washington, D.C, United States. (Poster presentation)
Amari Dupree., Fujisaki-Manome, A., Song, Y., Bishnupriya Sahoo., Nowrin Mow., Meng, Xia. (12. 2024). How Does Hydrodynamic Ice events Impact Sediment Plume in the Southern Basin of Lake Michigan? AGU2024 Conference, Washington, D.C, United States. (Poster presentation)
Song, Y. (08. 2024). Comparing the performance of 10 machine learning models in predicting Chlorophyll a in western Lake Erie. CIGLR HAB meeting, Ann Arbor, United States. (Oral presentation)
Song, Y., Fujisaki-Manome, A., Barker, C., McFayden, A., Kinner, NE., Kessler, J., Titze, D., Alloy, MM. (05. 2024). Oil in ice modeling and risk analysis in the Great Lakes, New Orleans, United States. (Poster presentation)
Song, Y. (01. 2024). Progress on oil in ice modeling in the Great Lakes. NOAA Great Lakes Environmental Research Laboratory, Ann Arbor, United States. (Invited talk)
Song, Y., Fujisaki-Manome, A., Barker, C., McFayden, A., Kinner, NE., Kessler, J., Titze, D., Alloy, MM. (2024.05). Oil in ice modeling and risk analysis in the Great Lakes. International Oil Spill Conference, New Orleans, United States. (Poster presentation)
Song, Y. (2024.01). Progress on oil in ice modeling in the Great Lakes. NOAA Great Lakes Environmental Research Laboratory Lunch and Learn, Ann Arbor, United States. (Invited talk)
Song, Y. (2023.09). Can selective withdrawal control algal blooms in reservoirs? The underly hydrodynamic mechanism. CIGLR Science and Snacks, Ann Arbor, United States. (Oral presentation)
Song, Y. (2023.08). Great Lakes Oil spill simulations using the General NOAA Operational Modeling Environment (GNOME) and Great Lake Operational Forecast System (GLOFS) hydrodynamic-ice data. 2023 FVCOM NOAA Virtual Workshop. (Oral presentation)
Song, Y., Fujisaki-Manome, A., Barker, C., Righi, D., Kessler, J., Titze, D., Wang, J. (2023.05). Advancing modeling capability of oil spill transport by considering ice cover in the Great Lakes. International Association for Great Lakes Research, Toronto, Canada. (Oral presentation)
Song, Y. (2021.11). Make the reservoir clear again: understanding and preventing algal blooms. Chongqing Jiaotong University, Chongqing, China. (Invited talk)
Song, Y., Li J., Zhang, L. L., Chen, M., Glibert, P. M., Yang, S. F. (2021.07). Key hydrodynamic indicator for implementing reservoir ecological operations to control dinoflagellate blooms in reservoirs. 2nd International Symposium of Water Disaster Mitigation and Water Environment Regulation, Chengdu, China. (Oral presentation)
Song, Y. (2021.01). Hydrodynamic mechanism of dinoflagellate blooms in reservoirs and controlling blooms through reservoir ecological operations. Hohai University, Nanjing , China. (Invited talk)
Glibert, P. M., Li, M., Zhang, F., Song, Y., Lin, C. H. M., Ahn, S. H. (2020.02). Modeling mixotrophic Karlodinium veneficum in Chesapeake Bay. Ocean Science Meeting, San Diego, the United States. (Poster presentation)
Song, Y., Zhang, L. L., Li J., Chen, M., Zhang, Y. W. (2017.08). Experimental study on impacts of hydrodynamic condition on growth of Microcystis aeruginosa. 37th IAHR World Congress, Kuala Lumpur, Malaysia. (Oral presentation)
Song, Y., Zhang, L. L., Chen, M., Cai, J. C., Li J. (2016.11). Impacts of flow velocity on growth of dominant species Microcystis aeruginosa of algae-bloom in reservoirs. The 12th National Conference on Environmental and Ecological Hydraulics, Mian Yang, China. (Oral presentation)