Embedded Files
Bismillahir Rahmanir Raheem
Course Teacher:
Dr. Masud Hasan
Office: B20
Email: mhasan2010@gmail.com (in English please)
Book: Bioinformatics and Functional Genomics, 3rd Edition, Jonathan Pevsner.
Class Schedule:
- Sunday and Tuesday, 5:30pm-6:45pm, B12-Lab3
Course Outline, Objectives, and Student Learning Outcome: [pdf]
Course Website: https://sites.google.com/view/tucs468january2019
Office Hours: Monday and Wednesday, 11-12, Building B20
Marks Distribution:
- Assignment 1: 10%
- Assignment 2: 10%
- Mid Term 1: 20%
- Mid Term 2: 20%
- Final Exam: 40%
Topics, Textbook reading, Hand notes:
Lecture 1: Introduction
- Slides [pdf]
- Textbook reading: Chapter 1
Lecture 2: Quick Overview of Molecular Biology
- Slides [pdf]
- Textbook reading:
Lecture 3: Access to the Information
- Slides: Covered in the coming lectures.
- Textbook reading: Chapter 2
Lecture 4: Pairwise Sequence Alignment I
- Slides: [pdf]
- Textbook reading: Chapter 3
Lecture 5: Pairwise Sequence Alignment II
Lecture 6: Pairwise Sequence Alignment III
Exercise Questions: Lecture 1-6 [pdf]
Lecture 7: Multiple Sequence Alignment I
- Slides [pdf]
- Textbook reading: Chapter 6
Lecture 8: Multiple Sequence Alignment II
Lecture 9: Phylogenetic Tree I
- Slides [pdf]
- Textbook reading: Chapter 7
Lecture 10: Phylogenetic Tree II
Lecture 11: Protein Structure I
- Slides [pdf]
- Textbook reading: Chapter 13
Lecture 12: Protein Structure II
- Slides [pdf]
- Textbook reading: Chapter 13
Lecture 13: System Biology I
- Slides [pdf]
- Textbook reading:
Lecture 14: System Biology II
- Slides [pdf]
- Textbook reading:
Assignment:
- A1: (10 marks):
- A2: (10 marks):
- Download the assignment by your ID: 3610182, 3610220, 3610396, 3610513, 3611116, 3611338, 3692108, 3692404, 3692579, 3692642 [Note: If you have zebra in Q3, then take Maylandia zebra]
- Submission deadline: Submit handwritten copy (Q3 should be printed) by 24-03-2019. Late submission not allowed. Online submission not allowed.
Exam:
- Midterm exam 1: (20 marks):
- Date: 17-02-2019
- Syllabus: Lecture 1, 2, 4, 5, 6
- Question type: Both MCQs and short questions
- Solution [pdf]
- Midterm exam 2: (20 marks):
- Date: 24-03-2019
- Syllabus: Lecture 7, 8, 9, 10
- Question type: Both MCQs and short questions
- Solution [pdf]
- Midterm exam 3 (Optional. Best two will be counted. No retake if you miss it) (20 marks):
- Date: 14-04-2019
- Syllabus: Lecture 11, 12, 13.
- Question type: MCQs, short questions, fill up the blanks.
- Solution [pdf]
- Final Exam (40 Marks):
- Date:
- Syllabus: All lectures.
- Question type: MCQs, short questions, fill up the blanks.
Marks: [pdf]
Course Exit Survey: [participate]
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