4 - Resources in [R] for environmental sequence data analysis using ordination.
There are many resources available, but they are scattered across the internet. Here is a list of useful resources related to the VEGAN and ECODIST packages in [R].
1. A vegan tutorial that starts by showing you how to get your data into [R]:
http://www.bio.utk.edu/fesin/msa2009/R/veganbird.pdf
2. A VEGAN tutorial on ordination that shows commands as well as sample output to go with the commands:
http://cc.oulu.fi/~jarioksa/opetus/metodi/vegantutor.pdf
3. An introduction to ordination using VEGAN:
http://cran.r-project.org/web/packages/vegan/vignettes/intro-vegan.pdf
4. Documentation for the VEGAN package:
http://cran.r-project.org/web/packages/vegan/vegan.pdf
5. Documentation for the ECODIST package: