Structural Chemistry Lab.

[2026]

213. Woo Cheol Lee, Junho Jeong, Chae Yeong Lee, Hyunjoon Cho, Man Hwan Oh, Je Chul Lee, Jee-Young Lee, Yangmee Kim, Structural insights and therapeutic targets in Acinetobacter baumannii capsule biosynthesis, FEBS Lett 2026. doi: 10.1002/1873-3468.70390.

212. Chae Yeong Lee, Woo Cheol Lee, Kyusung Chae, Eunhee Kim, Eunha Hwang, Yangmee Kim, NMR-driven insights into the evolutionary adaptation and dynamic regulation of Mycobacterium tuberculosis adenylate kinase: The critical role of glycine-mediated flexibility, Biochem Biophys Res Commun. 2026; 804: 153357

211. Hak Jun Lee, Seung Jun Lee, Yoon Hyun Sung, Seung Min Park, Seung Pyo Choi, Yangmee Kim, Young Kyung Yoo, Peptide-based antimicrobial effect against carbapenem-resistant Acinetobacter baumannii: preclinical drug assessment and translational potential, Front Pharmacol. 2026:17:1732644. doi: 10.3389/fphar.2026.1732644

[2025]

210. Chae Yeong Lee, Minwon Son, Woo Cheol Lee, Seoyeong Yoo, Sungjae Choi, Eunhee Kim, Eunha Hwang, Yangmee Kim, Structural and dynamic roles of tandem acyl carrier proteins in aryl polyene biosynthesis in carbapenem-resistant Acinetobacter baumannii, Protein Science 2025;34(12):e70382.

209. Jin Kyeong Lee, Chae Yeong Lee, Minwon Son, Byeongkwon Kim, Junho Jeong, Yeongjoon Lee, Woo Cheol Lee, Eunha Hwang, Eunhee Kim, Myeong Seon Jeong, Yangmee Kim, A Novel Peptide Antibiotic Targeting Gram-Negative Infections Designed from Mycobacterium tuberculosis Adenylate Kinase, J Med Chem. 2025; 68(18):19303-19330

208. ByeongkwonKim, Jin Kyeong Lee, Minwon Son, Hyeju Lee, Chae yeong Lee, Junho Jeong, Dasom Song, HeewoongYoon, EunhaHwang, Myeong Seon Jeong, Jiwon Seo, and Yangmee Kim, Therapeutic Potential of Novel Antimicrobial Peptide Pap12-6-10: Mechanisms of Antibacterial and Anti-inflammatory Action Against Gram-negative Sepsis, J Med Chem. 2025; 68(19):20283-20303

207. Chae Yeong Lee , Sungchan Jang, Hyunjoon Cho, Min-Cheol Jeong, Yoojin Oh and Yangmee Kim, Structural and Dynamic Insights into Acyl Carrier Protein upon Metal Binding and Acylation Revealed by NMR Spectroscopy and MD Simulations, IJMS 2025; 26(18):9005.

[2024]

206. Minwon Son, Sujung Oh, Yoojin Oh, Dasom Cheon, Ahjin Jang, Eunhee Kim, Nak-Kyoon Kim, Yangmee Kim*, Structural and dynamic insights into acyl carrier protein in Cutibacterium acnes reveal mechanisms for fatty acid synthesis and transport, Biochemical and Biophysical Research Communications, 2024;741(31), 151090

205. Min Yeong Choi†, Min Geun Jo†, Keun Young Min, Byeongkwon Kim, Yangmee Kim*, and Wahn Soo Choi*. 2024. Antimicrobial Peptide Pro10-1D Exhibits Anti-Allergic Activity: A Promising Therapeutic Candidate Int. J. Mol. Sci. 2024, 25(22), 12138.

204. S. Dinesh Kumar†, Jin Kyeong Lee†, Naveen Kumar Radhakrishnan†, Jeong Kyu Bang†, Byeongkwon Kim, Shubhash Chandra Chaudhary, Ajish Chelladurai, Byambasuren Ganbaatar, Eun Young Kim, Chul Won Lee, Sungtae Yang, Yangmee Kim,* and Song Yub Shin*, Antibacterial, Antibiofilm, and Anti-inflammatory Effects of a Novel Thrombin-Derived Peptide in Sepsis Models: Insights into Underlying Mechanisms, J Med Chem 2024;67(21) 19791-19812.

203. Dasom Song†, Byeongkwon Kim†, Minsang Kim†, Jin Kyeong Lee, Jieun Choi, Hyeju Lee, Sujin Shin, Dongmin Shin, Ho Yeon Nam, Yunho Lee, Seongsoo Lee, Yangmee Kim*, Jiwon Seo* Impact of Conjugation of the Reactive Oxygen Species (ROS)-Generating Catalytic Moiety with Membrane-Active Antimicrobial Peptoids: Promoting Multitarget Mechanism and Enhancing Selectivity J Med Chem. 2024;67(17):15148-15167.

202. Sujung Oh, Chaeyoung Lee, Minwon Son, Jiwon Yeon and Yangmee Kim* Dynamics of acyl carrier protein in de novo fatty acid synthesis by Enterococcus faecalis based on NMR spectroscopy and molecular dynamics simulation, Journal of Analytical Science and Technology 2024 15:31.

201. Seoyeong Yoo† , Jiwon Yeon†, Eunhee Kim and Yangmee Kim*, Important Features for Protein Foldings in Two Acyl Carrier Proteins from Enterococcus faecalis, J Microbiol Biotechnol. 2024;34(1):10-16.

[2023]

200. Minju Kim†, Shubhash Chandra Chaudhary†, Byeongkwon Kim and Yangmee Kim, Protective Effects of Rhamnetin in Carbapenem-Resistant Acinetobacter baumannii-Induced Sepsis Model and the Underlying Mechanism Int. J. Mol. Sci. 2023, 24(21), 15603

199. Hyeju Lee, Byeongkwon Kim, Minju Kim, Seoyeong Yoo, Jinkyeong Lee, Eunha Hwang, Yangmee Kim, Characterization of the Antimicrobial Activities of Trichoplusia ni Cecropin A as a High-Potency Therapeutic against Colistin-Resistant Escherichia coli. Pharmaceutics 15.6 (2023): 1752.

[2022]

198. Jiwon Yeon, Sujung Oh, Eunha Hwang Yangmee Kim, Structural study of acyl carrier protein of Enterococcus faecalis and its interaction with enzymes in de novo fatty acid synthesis. Biochemical and Biophysical Research Communications. 2022, 637:232-239

197. Hyeju Lee, Manigandan Krishnan, Minju Kim, Young Kyung Yoon, Yangmee Kim, Rhamnetin, a natural Flavonoid, Ameliorates Organ Damage in a Mouse Model of Carbapenem-Resistant Acinetobacter baumannii-Induced Sepsis. Int J Mol Sci. 2022, 23(21)

196. Manigandan Krishnan, Joonhyeok Choi, Ahjin Jang, Sungjae Choi, Jiwon Yeon, Mihee Jang, Yeongjoon Lee, Kkabi Son, Soon Young Shin, Myeong Seon Jeong, Yangmee Kim, Molecular mechanism underlying the TLR4 antagonistic and antiseptic activities of papiliocin, an insect innate immune response molecule Proc Natl Acad Sci USA. 2022;119(10):e2115669119

195. Seong-Eun Kim, Jin Lee, Jung-Ung An, Tae-Hun Kim, Chae-Won Oh, Yoon-Joo Ko, Manigandan Krishnan, Joonhyeok Choi, Do-Young Yoon, Yangmee Kim, Deok-Kun Oh. Regioselectivity of an arachidonate 9S-lipoxygenase from Sphingopyxis macrogoltabida that biosynthesizes 9S,15S- and 11S,17S-dihydroxy fatty acids from C20 and C22 polyunsaturated fatty acids, Biochim Biophys Acta Mol Cell Biol Lipids, 2022:1867(3):159091.

194. Ahjin Jang, Dasom Cheon, Eunha Hwhang, Yangmee Kim, Structural stability of Cutibacterium acnes acyl carrier protein studied using CD and NMR spectoscopy, Journal of Analytical Science and Technology, 2022:10.1186.

[2021]

193. Krishnan M, Choi J, Jang A, Yoon YK, Kim Y. Antiseptic 9-Meric Peptide with Potency against Carbapenem-Resistant Acinetobacter baumannii Infection. Int J Mol Sci. 2021; 22(22): 12520. doi: 10.3390/ijms222212520.

192. Woo Cheol Lee; Ahjin Jang; Jee-Young Lee; Yangmee Kim. Structural implication of substrate binding by peptidoglycan remodeling enzyme MepS.BBRC 2021;583:178-183. doi: 10.1016/j.bbrc.2021.10.050.

191. Joonhyeok Choi, Ahjin Jang, Young Kyung Yoon, and Yangmee Kim. Development of Novel Peptides for the Antimicrobial Combination Therapy Against Carbapenem-resistant Acinetobacter baumannii Infection Pharmaceutics 2021,13, 1800.

190. Woo Cheol Lee, Sungjae Choi, Ahjin Jang, Jiwon Yeon & Yangmee Kim. Structural basis of the complementary activity of two ketosynthases in aryl polyene biosynthesis Sci Rep. 2021. 11(1):16340. doi: 10.1038/s41598-021-95890-y.

189. Woo Cheol Lee, Sungjae Choi, Ahjin Jang, Kkabi Son, & Yangmee Kim. Structural comparison of Acinetobacter baumannii β-ketoacyl-acyl carrier protein reductases in fatty acid and aryl polyene biosynthesis. Sci Rep. 11:7945 (2021)

188. Sungjae Choi, Jungwoo Park, Jiwon Yeon, Ahjin Jang, Woo Cheol Lee and Yangmee Kim. Deciphering the Binding Interactions between Acinetobacter baumannii ACP and β-ketoacyl ACP Synthase III to Improve Antibiotic Targeting Using NMR Spectroscopy. Int J Mol Sci. 2021, 22, 3317.doi : 10.3390/ijms22073317

187. Krishnan M, Choi J, Choi S, Kim Y. Anti-endotoxin 9-meric peptide with therapeutic potential for the treatment of endotoxemia. J Microbiol Biotechnol. 2021. 31(1): 1-8 doi: 10.4014/jmb.2011.11011

[2020]

186. Manigandan Krishnan, Joonhyeok Choi, Ahjin Jang, Yangmee Kim. A Novel Peptide Antibiotic, Pro10-1D, Designed from Insect Defensin Shows Antibacterial and Anti-Inflammatory Activities in Sepsis Models. Int J Mol Sci. 2020; 21(7): 6216. doi: 10.3390/ijms21176216

185. Ha Y, Jang M, Lee S, Lee JY, Lee WC, Bae S, Kang J, Han M, Kim Y.(2020) Identification of inhibitor binding hotspots in Acinetobacter baumannii β-ketoacyl acyl carrier protein synthase III using molecular dynamics simulation. J Mol Graph Model 8;100:107669. doi:10.1016/j.jmgm.2020.107669

184. Yeongjoon Lee, Ahjin Jang, Min-Cheol Jeong, Nuri Park, Jungwoo Park, Woo Cheol Lee, Chaejoon Cheong, Yangmee Kim (2020) Structural Characterization of an ACP From Thermotoga maritima: Insights Into Hyperthermal Adaptation. Int J Mol Sci. 21(7), 2600. doi: 10.3390/ijms21072600.

183. Chauhan AK, Jang M., Kim Y.(2020) Phloretin protects macrophages from E. coli-induced inflammation through the TLR4 signaling pathway. J Microbiol Biotechnol. 30(3), 333-340. doi: 10.4014/jmb.1910.10063

[2019]

182. Chauhan AK, Kim J, Lee Y, Balasubramanian PK, Kim Y.(2019) Isorhamnetin Has Potential for the Treatment of Escherichia coli-Induced Sepsis. Molecules. 4;24(21). pii: E3984. doi: 10.3390/molecules24213984.

181. Park J, Lee Y, Cheon D, Kim Y.(2019) Structure and dynamics of human and bacterial acyl carrier proteins and their interactions with fatty acid synthesis proteins. Biochem Biophys Res Commun. 516(4):1183-1189. doi: 10.1016/j.bbrc.2019.07.018.

180. Jang M, Kim J, Choi Y, Bang J, Kim Y.(2019) Antiseptic Effect of Ps-K18: Mechanism of Its Antibacterial and Anti-Inflammatory Activities. Int J Mol Sci. 2;20(19). pii: E4895. doi: 10.3390/ijms20194895.

179. Son K, Kim J, Jang M, Chauhan AK, Kim Y.(2019) Effects of C-terminal residues of 12-mer peptides on antibacterial efficacy and mechanism. J Microbiol Biotechnol. 2019 ; 29(11): 1707~1716 40(10):1025-1032.

178. Cheon D, Kim Y. et al(2019) Target proteins of phloretin for its anti-inflammatory and antibacterial activities against Propionibacterium acnes-induced skin infection. Molecules 24(7) pii: E1319. doi: 10.3390/molecules24071319.

177. Kim J, Jacob B, Jang M, Kwak C, Lee Y, Son K, Lee S, Jung I, Jeong MS, Kwon SH, and Kim Y. (2019) Development of a novel short 12-meric papiliocin-derived peptide that is effective against Gram-negative sepsis, Scientific Reports, 9(1):3817.

176. Cheon D, Lee WC, Lee Y, Lee JY, Kim Y. (2019) Structural basis of branched-chian fatty acid synthesis by Propionibacterium acnes β-ketoacyl acyl carrier protein synthase, Biochem Biophys Res Commun. 509(1):322-328

175. Rajasekaran G, Dinesh Kumar S, Nam J, Jeon D, Kim Y, Lee CW, Park IS, Shin SY. (2019) Antimicrobial and anti-inflammatory activities of chemokine CXCL14-derived antimicrobial peptide and its analogs. Biochim Biophys Acta Biomembr. 1861(1):256-267

174. Pavithra K. Balasubramanian, Jieun Kim, Kkabi Son, Prasannavenkatesh Durai, and Yangmee Kim (2019) 3,6-Dihydroxyflavone: A Potent Inhibitor with Anti-Inflammatory Activity Targeting Toll-like Receptor 2 Bull. Korean Chem. Soc. Vol. 40, 51?55

173. Pavithra K. Lee Y, and Yangmee Kim (2019) Identification of Ligand-binding Hotspot Residues of CDK4 Using Molecular Docking and Molecular Dynamics Simulation Bull. Korean Chem. Soc. Vol. 40, 1025-1032

[2018]

172. Lee WC, Park J, Balasubramanian PK, and Kim Y. (2018) Elucidation of the crystal structure of FabD from the multidrug-resistant bacterium Acinetobacter baumannii. Biochem Biophys Res Commun. 505(1):208-214.

171. Kim J, Durai P, Jeon D, Jung ID, Lee SJ, Park YM, and Kim Y. (2018) Phloretin as a Potent Natural TLR2/1 Inhibitor Suppresses TLR2-Induced Inflammation. Nutrients. 10(7):E868.

170. Park HJ, Lee SJ, Cho J, Gharbi A, Han HD, Kang TH, Kim Y, Lee Y, Park WS, Jung ID, and Park YM. (2018) Tamarixetin Exhibits Anti-inflammatory Activity and Prevents Bacterial Sepsis by Increasing IL-10 Production. J Nat Prod. 81(6):1435-1443.

169. Lee WC, Jeong MC, Lee Y, Kwak C, Lee JY, and Kim Y. (2018) Structure and substrate specificity of β-ketoacyl-acyl carrier protein synthase III from Acinetobacter baumannii, Mol Microbiol. 108(5):567-577.

168. Lee Y, Kwak C, Jeong K, Durai P, Ryu KS, Kim E, Cheong C, Ahn HC, Kim HJ, and Kim Y. (2018) Tyr51: Key Determinant of the Low Thermostability of Colwellia psychrerythraea Cold Shock Protein, Biochemistry. 57(26):3625-3640.

167. Durai P, Lee Y, Kim J, Jeon D and Kim Y. (2018) Biophysical studies reveal key interactions between papiliocin-derived PapN and lipopolysaccharide in gram-negative bacteria, Journal of Microbiology and Biotechnology. 28(5):671-678.

[2017]

166. Jeon D, Jeong MC, Jacob B, Bang JK, Kim EH, Cheong C, Jung ID, Park Y, and Kim Y. (2017) Investigation of cationicity and structure of pseudin-2 analogues for enhanced bacterial selectivity and anti-inflammatory activity, Scientific Reports. 7(1):1455.

165. Lee JY, Jeong MC, Jeon D, Lee Y, Lee WC, and Kim Y. (2017) Structure-activity relationship-based screening of antibiotics against Gram-negative Acinetobacter baumannii, Bioorganic & Medicinal Chemistry. 25(1):372?380.

164. Jeon D, Jeong MC, Jnawali HN, Kwak C, Ryoo S, Jung ID and Kim Y. (2017) Phloretin Exerts Anti-Tuberculosis Activity and Suppresses Lung Inflammation, Molecules. 22(1):E183.

163. Kwak C, Lee Y, Jeon D, Durai P, Ryoo S, and Kim Y. (2017) 3,6-Dihydroxyflavone Has Antituberculosis Activity and Suppresses Lung Inflammation, Bulletin of the Korean Chemical Society.38(8):821-829.

162. Jeon D, Jacob B, Kwak C, and Kim Y. (2017) Short Antimicrobial Peptides Exhibiting Antibacterial and Anti-inflammatory Activities Derived from the N-terminal Helix of Papiliocin, Bulletin of the Korean Chemical Society. 38(11):1260-1268.

[2016]

161. Jnawali HN, Jeon D, Jeong MC, Lee E, Jin B, Ryoo S, Yoo J, Jung ID, Lee SJ, Park YM, Kim Y. (2016) Antituberculosis Activity of a Naturally Occurring Flavonoid, Isorhamnetin, J Nat Prod.79(4):961-969.

160. Park YG, Jung MC, Song H, Jeong KW, Bang E, Hwang GS, and Kim Y. (2016) Novel Structural Components Contribute to the High Thermal Stability of Acyl Carrier Protein from Enterococcus faecalis, Journal of Biological Chemistry. 291(4):1692-1702.

159. Jeong MC, Jeon D, Shin A, Jin S, Shin SY, Park YS, and Kim Y. (2016) Effects of Hydrophobic Peptoid Substitutions on the Bacterial Cell Selectivity and Antimicrobial Activity of Piscidin 1, Bulletin of the Korean Chemical Society. 37(10):1545?51.

158. Kim MJ, Jeon D, Kwak C, Ryoo S, and Kim Y. (2016) Rhamnetin Exhibits Anti-Tuberculosis Activity and Protects against Lung Inflammation, Bulletin of the Korean Chemical Society. 37(10):1703-9.

157. Cheng X, Kim JK, Kim Y, Bowie JU, and Im W. (2016) Molecular Dynamics Simulation Strategies for Protein-Micelle Complexes, Biochimica et Biophysica Acta-Biomembranes. 1858(7 Pt B):1566-72.

[2015]

156. Lee E, Kim JK, Jeon D, Jeong KW, Shin A and Kim Y. (2015) Functional Roles of Aromatic Residues and Helices of Papiliocin in its Antimicrobial and Anti-inflammatory Activities, Scientific Reports. 5:12048.

155. Shin A, Lee E, Jeon D, Park YG, Bang JK, Park Y, Shin SY and Kim Y. (2015) Peptoid-Substituted Hybrid Antimicrobial Peptide Derived from Papiliocin and Magainin 2 with Enhanced Bacterial Selectivity and Anti-inflammatory Activity, Biochemistry. 54(25):3921-3931.

154. Jnawali HN, Park YG, Jeon D, Lee E and Kim Y. (2015) Anti-Inflammatory Activities of Biapigenin Mediated by Actions on p38 MAPK Pathway, Bulletin of the Korean Chemical Society. 36(9):1-5.

153. Jnawali HN, Jeon D, Park YG, Lee E, Heo Y and Kim Y. (2015) Rhamnetin Is a Potent Inhibitor of Extracellular Signal-regulated Kinase 1 and c-Jun N-Terminal Kinase 1, Bulletin of the Korean Chemical Society. 36(8):2107-2110.

152. Lee E, Shin A and Kim Y. (2015) Anti-Inflammatory Activities Of Cecropin A and its Mechanism of action, Archives of Insect Biochemistry and Physiology. 87(4):1?14.

[2014]

151. Lee E, Shin A, Jeong KW, Jin B, Jnawali HN, Shin S, Shin SY and Kim Y. (2014) Role of phenylalanine and valine10 residues in the antimicrobial activity and cytotoxicity of piscidin-1, PLoS One. 9(12):e114453.

150. Jin B, Jeong KW and Kim Y. (2014) Structure and Fiexibility of the thermophilic cold-shock protein of Thermus aquaticus, Biochem Biophys Res Commun. 451(3):402-407.

149. Jeong KW, Kang DI, Park YG, Lee E, Shin A, Jin B, Lee CK, Kim EH, Jeon YH, Kim E and Kim Y. (2014) Structure and Backbone Dynamics of vanadate-bound PRL-3: Comparison of 15N NMR Relaxation Profiles of free and vanadate-bound PRL-3, Biochemistry. 53(9):4814-4825.

148. Lee E, Jeong KW, Shin A and Kim Y. (2014) Anti-inflammatory Activity of 3,6,3′-Trihydroxyflavone in Mouse Macrophages, In vitro, Bulletin of Korean Chemical Society. 35(11):3169-3174.

147. Lee E, Jeong KW, Jnawali HN, Shin A, Heo YS and Kim Y. (2014) Cytotoxic Activity of 3,6-Dihydroxyflavone in Human Cervical Cancer Cells and Its Therapeutic Effect on c-Jun N-Terminal Kinase Inhibition, Molecules. 19(9):13200-13211.

146. Shin A, Lee E, Kim JK, Bang JK and Kim Y. (2014) 9-Meric Peptide Analogs of Defensin-like Antimicrobial Peptide Coprisin with Potent Antibacterial Activities with Bacterial Sell Selectivities, Bulletin of Korean Chemical Society. 35(9):2809-2812.

145. Jnawali HN, Lee E, Shin A, Park Y and Kim Y. (2014) Effect of Quercetin in the UV-Irradiated Human Keratinocyte HaCaT Cells and A Model of Its Binding To p38 MAPK, Bulletin of Korean Chemical Society. 35(9):2787-2790.

144. Jang HS, Lee JH, Park YS, Kim YO, Park J, Yang TY, Jin K, Lee J, Park S, You JM, Jeong KW, Shin A, Oh IS, Kwon MK, Kim YI, Cho HH, Han HN, Kim Y, Chang YH, Paik SR, Nam KT and Lee YS (2014) Tyrosine-mediated two-dimensional peptide assembly and its role as a bio-inspired catalytic scaffold, Nature communications. 5:3665.

143. Jacob B, Kim Y, Hyun JK, Park IS, Bang JK and Shin SY (2014) Bacterial killing mechanism of sheep myeloid antimicrobial peptide-18 (SMAP-18) and its Trp-substituted analog with improved cell selectivity and reduced mammalian cell toxicity, Amino acids. 46(1):187-98.

142. Jnawali HN, Lee E, Jeong KW, Shin A, Heo YS and Kim Y. (2014) Anti-inflammatory Activity of Rhamnetin and a Model of Its Binding to c-Jun NH2-terminal Kinase 1 and p38 MAPK, Journal of Natural Products. 77(2):258-63.

[2013]

141. Jeong KW, Jeong MC, Jin B and Kim Y. (2013) Relationship between structural flexibility and function in the C-terminal region of the heparin-binding domain of VEGF165, Biochemistry.52(49):8823-8832.

140. Murugan RN, Jacob B, Ahn M, Hwang E, Sohn H, Park HN, Lee E, Seo JH, Cheong C, Nam KY, Hyun JK, Jeong KW, Kim Y, Shin SY and Bang JK. (2013) De novo design and synthesis of ultra-short peptidomimetic antibiotics having dual antimicrobial and anti-inflammatory activities, PLoS One.28(11):e80025.

139. Lee E, Jeong KW, Shin A, Jin B, Jnawali HN, Jun BH, Lee JY, Heo YS and Kim Y. (2013) Binding model for eriodictyol to Jun-N terminal kinase and its anti-inflammatory signaling pathway, BMB Reports. 46(12):594-599.

138. Lee E, Jeong KW, Lee J, Shin A, Kim JK, Lee J, Lee DG and Kim Y. (2013) Structure-activity relationships of cecropin-like peptides and their interactions with phospholipid membrane, BMB Reports. 46(5):282-287.

137. Jnawali HN, Lee E, Jeong KW, Heo YS and Kim Y. (2013) Binding Model of Fisetin and Human c-Jun NH2-Terminal Kinase1 and Its Anti-inflammatory Activity, Bulletin of Korean Chemical Society.34(9):2629-2634.

135. Lee J, Jeong KW, Jin B, Ryu KS, Kim EH, Ahn JH and Kim Y. (2013) Structural and Dynamic Features of Cold-Shock Proteins of Listeris monocytogenes, a Psychrophilic Bacterium, Biochemistry.52(14):2492-2504.

134. Lee E, Kim JK, Shin S, Jeong KW, Shin A, Lee J, Lee DG, Hwang JS and Kim Y. (2013) Insight into the antimicrobial activities of coprisin isolated from the dung beetle, Copris tripartitus, revealed by structure-activity relationships, Biochimica et Biophysica Acta-Biomembranes. 1828(2):271-283.

133. Jeong KW, Ko H, Lee SA, Hong E, Ko S, Cho HS, Lee W and Kim Y. (2013) Backbone Dynamics of An Atypical Orphan Response Regulator Protein, Helicobacter pylori 1043, Molecules and cells.35(2):158-165.

132. Hwang IS, Hwang JS, Hwang JH, Choi H, Lee E, Kim Y and Lee DG. (2013) Synergistic Effect and antibiofilm activity between the antimicrobial peptide coprisin and conventional antibiotics against opportunistic bacteria, Current Microbiology. 66(1):56-60.

[2012]

131. Nan YH, Jacob B, Kim Y and Shin SY. (2012) Linear bactenecin analogs with cell selectivity and anti-endotoxic activity, Jornal of Peptide Science. 18(12):740?747.

130. Lee E, Shin S, Kim JK, Woo ER and Kim Y. (2012) Anti-inflammatory Effects of Amentoflavone on Modulation of Signal Pathways in LPS-stimulated RAW264.7 Cells, Bulletin of Korean Chemical Society. 33(9):2878-2882.

129. Choi J, Jeong KW, Kim JK, Chang B, Lee JY and Kim Y. (2012) 3’,4’-Dihydroxyl Groups in Luteolin are Important for its Inhibitory Activities against ADAMTS-4, Bulletin of Korean Chemical Society. 33(9):2907-2909.

128. Lee J, Jeong KW and Kim Y. (2012) Purification and Structural Characterization of Cold Shock Protein from Listeria monocytogenes, Bulletin of Korean Chemical Society. 33(8):2508-2512.

127. Lee J, Hwang JS, Hwang IS, Cho J, Lee E, Kim Y and Lee DG (2012) Coprisin-induced antifungal effects in Candida albicans correlate with apoptotic mechanisms, Free Radical Biology and Medicine.52(11-12):2302-11.

126. Joo YC, Jeong KW, Yeom SJ, Kim YS, Kim Y and Oh DK. (2012) Biochemical characterization and FAD-binding analysis of oleate hydratase from Macrococcus caseolyticus, Biochimie. 94(3):907-915.

125. Lee E, Shin S, Lee JY, Lee S, Kim JK, Yoon DY, Woo ER and Kim Y. (2012) Cytotoxic Activities of Amentoflavone against Human Breast and Cervical Cancers are Mediated by Increasing of PTEN Expression Levels due to Peroxisome Proliferator-Activated Receptor γ Activation, Bulletin of Korean Chemical Society. 33(7):2219-2223.

124. Lee JY, Kim JK, Lee S, Lee E, Shin S, Jin Q, Yoon DY, Woo ER and Kim Y. (2012) Binding Model of Amentoflavone to Peroxisome Proliferator-Activated Receptor γ, Bulletin of Korean Chemical Society. 33(5):1475-1479.

123. Lee JY, Jeong KW, Shin S, Lee JU and Kim Y. (2012) Discovery of Novel Selective Inhibitors of Staphylococcusaureus β-Ketoacyl Acyl Carrier Protein Synthase III, European Journal of Medicinal Chemistry. 47(1):261-269.

[2011]

122. Cho MC, Lee DH, Kim EJ, Lee JY, Kang JW, Song JH, Chong Y, Kim Y, Hong JT and Yoon DY. (2011) Novel PPARc partial agonists with weak activity and no cytotoxicity; identified by a simple PPARc ligand screening system, Molecular and Cellular Biochemistry. 358(1-2):75-83.

121. Lee JY, Lee E, Jeong KW and Kim Y. (2011) Antimicrobial Flavonoid, 3,6-Dihydroxyflavone, Have Dual Inhibitory Activity against KAS III and KAS I, Bulletin of Korean Chemical Society. 32(9):3219-3222.

120. Lee E, Kim JK, Shin S, Jeong KW, Lee J, Lee DG, Hwang JS and Kim Y. (2011) Enantiomeric 9-mer peptide analogs of protaetiamycine with bacterial cell selectivities and anti-inflammatory activities, Jornal of Pepide Science. 17(10):675-682.

119. Kim JK, Lee E, Shin S, Jeong KW, Lee JY, Bae SY, Kim SH, Lee J, Kim SR, Lee DG, Hwang JS and Kim Y. (2011) Structure and function of papiliocin with antimicrobial and anti-inflammatory activities isolated from the swallowtail butterfly, Papilio xuthus Journal of Biological Chemistry. 286(48):41296-41311.

118. Kim JK, Shin S, Lee JY, Lee S, Lee E, Jin Q, Woo ER, Yoon DY and Kim Y. (2011) Biapigenin, Candidate of an Agonist of Human Peroxisome Proliferator-Activated Receptor γ with Anticancer Activity, Bulletin of Korean Chemical Society. 32(8):2717-2721.

117. Yeom SJ, Kim YS, Lim YR, Jeong KW, Lee JY, Kim Y and Oh DK. (2011) Molecular characterization of a novel thermostable mannose-6-phosphate isomerase from Thermus thermophilus, Biochimie. 93(10):1659-1667.

116. Lee JY, Lee J, Jeong KW, Lee E and Kim Y. (2011) Flavonoid Inhibitors of β-Ketoacyl Acyl Carrier Protein Synthase III against Methicillin-Resistant Staphylococcus aureus, Bulletin of Korean Chemical Society. 32(8):2695-2699.

115. Kim JK, Lee E, Jeong KW and Kim Y. (2011) Structure-Activity Relationships of 9-mer Antimicrobial Peptide analogue of Protaetiamycine, 9Pbw2, Journal of the Korean Magnetic Resonance Society. 15(1):1-13.

114. Lee JY, Jeong KW, Lee JU, Kang DI and Kim Y. (2011) In Silico Screening of a Novel Inhibitor of β-Ketoacyl Acyl Carrier Protein Synthase I, Bulletin of Korean Chemical Society. 32(5):1645-1649.

113. Jeong KW, Lee JY, Lee SA, Yang SP, Ko H, Kang DI, Chae CB and Kim Y. (2011) Dynamics of a Heparin-Binding Domain of VEGF165 Complexed with Its Inhibitor Triamterene, Biochemistry.50(22):4843-4854.

112. Hwang B, Hwang JS, Lee J, Kim JK, Kim SR, Kim Y and Lee DG. (2011) Induction of yeast apoptosis by an antimicrobial peptide, Papiliocin, Biochemical and Biophysical Reearch Communication. 29(408):89?93.

111. Jeong KW, Kang DI, Lee JY, Kim HJ and Kim Y. (2011) Mutagenic Analysis of hPNMT Confirms the Importance of Lys57 and the Inhibitor Binding Site, Bulletin of Korean Chemical Society. 32(2):455-458.

[2010]

110. Lee SY, Jung HY, Kim TO, Im DW, You KY, Back JM, Kim Y, Kim HJ, Shin W and Heo YS. (2010) Cloning, purification, crystallization and preliminary X-ray crystallographic analysis of the N-terminal domain of DEAD-box RNA helicase from Staphylococcus aureus strain Mu50, Acta Crystallographica Section F Structural Biology Crystallization Communications. 66(Pt 12):1674-1676.

109. Lee K, Jeong KW, Lee Y, Song JY, Kim MS, Lee GS and Kim Y. (2010) Pharmacophore modeling and virtual screening studies for new VEGFR-2 kinase inhibitors, European Journal of Medicinal Chemistry. 45(11):5420-5427.

108. Lee J, Hwang JS, Hwang B, Kim JK, Kim SR, Kim Y and Lee DG. (2010) Membrane Perturbation Induced by Papiliocin peptide, derived from Papilio xuthus, in Candida albicans, Journal of Microbiology and Biotechnology. 20(8):1185-1188.

107. Lee JY, Jeong KW, Heo YS and Kim Y. (2010) Docking Study of Flavonols and Human c-Jun N-terminal Kinase 1, Bulletin of Korean Chemical Society. 31(8):2147-2150.

106. Kim JK, Lee SA, Shin S, Lee JY, Jeong KW, Nan YH, Park YS, Shin SY and Kim Y. (2010) Structural flexibility and the positive charges are the key factors in bacterial cell selectivity and membrane penetration of peptoid-substituted analog of Piscidin 1, Biochimica et Biophysica Acta-Biomembranes. 1798(10):1913-1925.

105. Lee K, Jeong KW, Lee Y, Song JY, Kim MS, Lee GS and Kim Y. (2010) Pharmacophore modeling and virtual screening studies for new VEGFR-2 kinase inhibitors, European Journal of Medicinal Chemistry. 45(11):5420-5427.

104. Lee JY, Kim JK, Cho MC, Shin S, Yoon DY, Heo YS and Kim Y. (2010) Cytotoxic Flavonoids as Agonists of Peroxisome Proliferator-Activated Receptor gamma on Human Cervical and Prostate Cancer Cells, Journal of Natural Products. 73(7):1261-1265.

103. Jung HY, Kim KH, Hyoung JH, Han MR, Kim HK, Lee KJ, Kim Y, Kim HJ and Heo YS. (2010) Preliminary X-ray crystallographic analysis of the breakage-reunion domain of the GyrA subunit of DNA gyrase from Colwellia psychrerythraea strain 34H, Acta Crystallogaphica. Section F Structural Biology and Crystallization Communications. 66(Pt 4):439-441.

102. Wang P, Nan YH, Yang ST, Kang SW, Kim Y, Park IS, Hahm KS and Shin SY. (2010) Cell selectivity and anti-inflammatory activity of a Leu/Lys-rich a-helical model antimicrobial peptide and its diastereomeric peptides, Peptides. 31(7):1251-1261.

101. Hong SK, Kim KH, Park JK, Jeong KW, Kim Y and Kim EK (2010) New design platform for malonyl-CoA-acyl carrier protein transacylase, FEBS Letters. 584(6):1240-1244.

100. Kang DI, Lee JY, Kim W, Jeong KW, Shin S, Yang J, Park E, Chae YK and Kim Y. (2010) Discovery of Novel human Phenylethanolamine N-methyltransferase (hPNMT) Inhibitors using 3D Pharmacophore-Based insilico, Biophysical Screening and Enzymatic Activity Assays, Molecules and Cells. 29(6):595-602.

[2009]

99. Moon CH, Jeong KW, Kim HJ, Heo YS and Kim Y. (2009) Recombinant Expression, Isotope Labeling, and Purification of Cold Shock Protein from Colwellia psychrerythraea for NMR Study, Bulletin of Korean Chemical Society. 30(11):2647-2650.

98. Lee J, Hong HJ, Kim JK, Hwang JS, Kim Y and Lee DG. (2009) A novel antifungal analog peptide derived from protaetiamycine, Molecules and Cells. 28(5):473-477.

97. Wang P, Bang JK, Kim HJ, Kim JK, Kim Y and Shin SY. (2009) Antimicrobial specificity and mechanism of action of disulfide-removed linear analogs of the plant-derived Cys-rich antimicrobial peptide Ib-AMP1, Peptides. 30(12):2144-2149.

96. Lee JY, Jung KW, Kim W and Kim Y. (2009) Binding Models of Flavonols to Human Vascular Endothelial Growth Factor Receptor 2, Bulletin of Korean Chemical Society. 30(9):2083-2086.

95. Lee JY, Jeong KW and Kim Y. (2009) Flavonoids Can Be Potent Inhibitors of Human Phenylethanolamine N-methyltransferase(hPNMT), Bulletin of Korean Chemical Society. 30(8):1835-1838.

94. Jeong KW, Shin S, Kim JK and Kim Y. (2009) Antibacterial Activity and Synergism of the Hybrid Antimicrobial Peptide, CAMA-syn, Bulletin of Korean Chemical Society. 30(8):1839-1844.

93. Kim JK, Lee JU, Kim WH, Park YK, Hahm KS, and Kim Y. (2009). Effects of Substitutions of Gln16 and Asp18 with Phe or Tyr in HP(2-20) on its Structure and Antimicrobial Activity. Journal of the Korean Magnetic Resonance Society, 13(1), 27–34.

92. Lee JY, Jeong KW, Shin S, Lee JU and Kim Y. (2009) Antimicrobial natural products as β-ketoacyl-acyl carrier protein synthase III inhibitors, Bioorganic & Medicinal Chemistry. 17(15):5408-5413.

91. Shin S, Kim JK, Lee JY, Jeong KW, Hwang JS, Lee J, Lee DG, Kim I, Shin SY and Kim Y. (2009) Design of Potent 9-mer Antimicrobial Peptide Analogues of Protaetiamycine and Investigation of Mechanism of Antimicrobial Action, Journal of Peptide Science. 15(9):559-568.

90. Lee JY, Lee SA, Kim JK, Chae CB and Kim Y. (2009) Interaction Models of Substrate Peptides and β-Secretase Studied by NMR Spectroscopy and Molecular Dynamics Simulation, Molecules and Cells.27(6):651-656.

89. Lee K, Kim J, Jeong KW, Lee KW, Lee Y, Song JY, Kim MS, Lee GS and Kim Y. (2009) Structure-based virtual screening of Src kinase inhibitors, Bioorganic & Medicinal Chemistry. 17(8):3152-3161.

88. Jeong KW, Lee JY, Kang DI, Lee JU, Shin SY and Kim Y. (2009) Screening of Flavonoids as Candidate Antibiotics against Enterococcus faecalis, Journal of Natural Products. 72(4):719-724.

87. Nan YH, Park KH, Park Y, Jeon YJ, Kim Y, Park IS, Hahm KS and Shin SY. (2009) Investigating the effects of positive charge and hydrophobicity on the cell selectivity, mechanism of action and anti-inflammatory activity of a Trp-rich antimicrobial peptide indolicidin, FEMS Microbiology Letters.292(1):134-140.

86. Lee JY, Jeong KW, Lee JU, Kang DI and Kim Y. (2009) Novel E. coli beta-ketoacyl-acyl carrier protein synthase III inhibitors as targeted antibiotics, Bioorganic & Medicinal Chemistry. 17(4):1506-1513.

[2008]

85. Kim W, Back SH, Kang DI, Shin HC and Kim Y. (2008) NMR Assignment of des [40-93] Mutant of Bovine Angiogenin, Bulletin of Korean Chemical Society. 29(11):2259-2263.

84. Lee JY, Jung KW and Kim Y. (2008) Inhibitor Design for Human Heat Shock Protein 70 ATPase Domain by Pharmacophore-based in silico Screening, Bulletin of Korean Chemical Society.29(9):1717-1722.

83. Lee JY, Jung KW, Woo ER and Kim Y. (2008) Docking Study of Biflavonoids, Allosteric Inhibitors of Protein TyrosinePhosphatase 1B, Bulletin of Korean Chemical Society. 29(8):1479-1484.

82. Jeong KW, Lee JY, Kang D, Lee JU, Hwang YS and Kim Y. (2008) Flavonoids as Substrates of Bacillus halodurans O-Methyltransferase, Bulletin of Korean Chemical Society. 29(7):1311-1314.

81. Lee JU, Park KH, Lee JY, Kim J, Shin SY, Park Y, Hahm KS and Kim Y. (2008) Cell Selectivity of Arenicin-1 and its Derivative with Two Disulfide Bonds, Bulletin of Korean Chemical Society.29(6):1190-1194.

80. Kim NH, Kim HJ, Kang DI, Jeong KW, Lee JK, Kim Y and Oh DK (2008) Conversion shift of D-Fructose to D-Psicose for Enzyme-Catlyzed Epimerization by Addition of Borate, Applied and Environmental Microbiology. 74(10):3008-3013.

79. Chun S, Lee JY, Ro SG, Jeong KW, Kim Y and Yoon CJ (2008) 3D Quantitative and Qualitative Structure-Activity Relationships of the δ-Opioid Receptor Antagonists, Bulletin of Korean Chemical Society. 29(3):656-662.

78. Park SC, Kim MH, Mohammad AH, Shin SY, Kim Y, Lorenzo S, Wade JD, Park Y and Hahm KS. (2008) Amphipathic α-helical Peptide, HP(2-20), and Its Analogues Derived from Helicobacter Pylori: Pore Formation Mechanism in Various Lipid Composition, Biochimica et Biophysica Acta-Biomembranes. 1778(1):229-241.

[2007]

77. Kang DI, Jung KW, Kim S, Lee SA, Jhon GJ and Kim Y. (2007) Tertiary Structure of Ginsenoside Re Studied by NMR Spectroscopy, Bulletin of Korean Chemical Society. 28(12):2209-2213.

76. Hong E, Lee HM, Ko H, Kim DU, Jeon BY, Jung J, Shin J, Lee SA, Kim Y, Jeon YH, Cheong C, Cho HS and Lee W. (2007) Structure of an Atypical Orphan Response Regulator Protein Supports a New Phosphorylation-Independent Regulatory Mechanism, Journal of Biological Chemistry.282(28):20667-20675.

75. Jeong KW, Lee JY, Lee SA and Kim Y. (2007) Homology Modeling and Docking Study of β-Ketoacyl Acyl Carrier Protein Synthase III from Enterococcus Faecalis, Bulletin of Korean Chemical Society. 28(8):1335-1340.

74. Lee JY, Lee SA and Kim Y. (2007) 3D Structure of Bacillus halodurans O-Methyltransferase, a Novel Bacterial O-Methyltransferase by Comparative Homology Modeling, Bulletin of Korean Chemical Society. 28(6):941-946.

73. Lee JY, Baek S and Kim Y. (2007) Receptor-oriented Pharmacophore-based in silico Screening of Human Catechol O-Methyltransferase for the Design of Antiparkinsonian Drug, Bulletin of Korean Chemical Society. 28(3):379-385.

72. Lee SA, Kim YK, Lim SS, Zhu WL, Ko H, Shin SY, Hahm KS and Kim Y. (2007) Solution structure and cell selectivity of Piscidin 1 and its analogues, Biochemistry. 46(12):3653-3663.

71. Lee JU, Kang DI, Zhu WL, Shin SY, Hahm KS and Kim . (2007) Solution Structures and Biological Functions of the Antimicrobial Peptide, Arenicin-1, and its Linear Derivative, Biopolymers Peptide Science. 88(2):208-216.

70. Park Y, Park SC, Park HK, Shin SY, Kim Y and Hahm KS. (2007) Structure-Activity Relationship of HP (2-20) Analogue Peptide: Enhanced Antimicrobial Activity by N-terminal Random Coil Region Deletion, Biopolymers Peptide Science. 88(2):188-197.

69. Moon WJ, Hwang DK, Park EJ, Kim Y and Chae YK (2007) Recombinant expression, isotope labeling, refolding, and purification of an antimicrobial peptide, piscidin, Protein Expression and Purification. 51(2):141-146.

[2006]

68. Zhu WL, Lan H, Park Y, Yang ST, Kim JI, Park IS, You HJ, Lee JS, Park YS, Kim Y, Hahm KS and Shin SY. (2006) Effects of Pro → Peptoid Residue Substitution on Cell Selectivity and Mechanism of Antibacterial Action of Tritrpticin-Amide Antimicrobial Peptide, Biochemistry. 45(43):13007-13017.

67. Park E, Chae YK, Lee JY, Lee B and Kim Y. (2006) Expression and Purification of a Cathelicidin-Derived Antimicrobial Peptide, CRAMP, Journal of Microbiology and Biotechnology. 16(9):1429-1433.

66. Zhu WL, Park Y, Park IS, Park YS, Kim Y, Hahm KS and Shin SY. (2006) Improvement of Bacterial Cell Selectivity of Melittin by a Single Trp Mutation with a Peptoid Residue, Protein and Peptide Letters. 13(7):719-725.

65. Yang JY, Shin SY, Lim SS, Hahm KS and Kim Y. (2006) Structure and Bacterial Cell Selectivity of a Fish-Derived Antimicrobial Peptide, Pleurocidin, Journal of Microbiology and Biotechnology. 16(6):880-888.

64. Kim Y, Kovrigin EL and Eletr Z. (2006) NMR studies of Escherichia coli acyl carrier protein: Dynamic and structural differences of the apo- and holo-forms, Biochemical and Biophysical Research Communications. 341(3):776-783.

63. Shin EK, Kim HJ, Kim Y, Kim Y and Park YS. (2006) D-Phg-L-Pro Dipeptide-derived prolinol ligands for highly enantioselective Reformatsky,Tetrahedron Letters. 47(12):1933-1935.

62. Lee KH, Lee DG, Park Y, Kang DI, Shin SY, Ham KS and Kim Y. (2006) Interactions between the plasma membrane and the Antimicrobial Peptide, HP (2-20) and Its Analogues Derived from Helicobacter Pylori, Biochemical Journal. 394(1):105-114.

61. Yang ST, Jeon JH, Kim Y, Shin SY, Hahm KS and Kim JI. (2006) Possible Role of a PXXP Central Hinge in the Antibacterial Activity and Membrane Interaction of PMAP-23, a Member of Cathelicidin Family, Biochemistry. 45(6):1775-1784.

[2005]

60. Ko H, Shim G and Kim Y. (2005) Evidences that β-Lactose Forms Hydrogen Bonds in DMSO, Bulletin of Korean Chemical Society. 26(12):2001-2006.

59. Lee JY and Kim Y. (2005) Comparative Homology Modeling and Ligand Docking Study of Human Catechol-O-Methyltransferase for Antiparkinson Drug Design, Bulletin of Korean Chemical Society.26(11):1695-1700.

58. Lim SS, Kim Y, Park Y, Kim JI, Park IS, Hahm KS and Shin SY. (2005) The role of the central L- or D-Pro residue on structure and mode of action of a cell-selective α-helical IsCT-derived antimicrobial peptide, Biochemical and Biophysical Research Communications. 334(8):1329-1335.

57. Song YM, Park Y, Lim SS, Yang ST, Woo ER, Park IS, Lee JS, Kim JI, Hahm KS, Kim Y and Shin SY. (2005) Cell Selectivity and Mechanism of Action of Antimicrobial Model Peptides Containing Peptoid Residues, Biochemistry. 44(36):12094-12106.

56. Kang DI, Baek D, Shin SY and Kim Y. (2005) Structure of CT26 in the C-terminal of Amyloid Precursor Protein Studied by NMR Spectroscopy, Bulletin of Korean Chemical Society. 26(8):1225-1228.

55. Kang DI, Lee JY, Jeong SM, Lee JH, Nah SY and Kim Y. (2005) Evidence that the tertiary structure of 20(S)-ginsenoside Rg3 with tight hydrophobic packing near the chiral center is important for Na(+) channel regulation, Biochemical and Biophysical Research Communications. 333(4):1194-1201.

54. Lee BH, Jeong SM, Lee JH, Kim JH, Yoon IS, Lee JH, Choi SH, Lee SM, Chang CG, Kim HC, Han Y, Paik HD, Kim Y and Nah SY. (2005) Quercetin Inhibits the 5-Hydroxytryptamine Type 3 Receptor-mediated Ion Current by Interacting with Pre-Transmembrane Domain I, Molecules and Cells.20(1):69-73.

53. Chang JY, Shin EK, Kim HJ, Kim Y and Park YS. (2005) Stereoselective syntheses of tri- and tetrapeptide analogues by dynamic resolution of α-halo amides in nucleophilic substitution, Tetrahedron Letters. 61(11):2743-2750.

[2004]

52. Jeoung SM, Lee JH, Kim JH, Lee BH, Yoon IS, Lee JH, Kim DH, Rhim H, Kim Y and Nah SY. (2004) Stereospecificity of Ginsenoside Rg3 Action on Ion Channels, Molecules and Cells. 18(3):383-389.

51. Lee K, Shin SY, Kim K, Lim SS, Hahm KS and Kim Y. (2004) Antibiotic Activity and Structural Analysis of the Scorpion-derived Antimicrobial peptide IsCT and Its Analogs, Biochemical and Biophysical Research Communicatons. 323(2):712-719.

50. Park K, Lim D, Park SD, Kim MY and Kim Y. (2004) Angiogenesis Inhibitor Derived from Angiostatin Active Sites, Bulletin of Korean Chemical Society. 25(9):1331-1335.

49. Nam J, Chang JY, Shin EK, Kim HJ, Kim Y, Jang S and Park YS. (2004) Asymmetric nucleophilic substitution of α-bromo amides via dynamic kinetic resolution for the preparation of dipeptide analogues, Tetrahedron. 60(30):6311-6318.

48. Lee S and Kim Y. (2004) Molecular Dynamics Simulations on β Amyloid Peptide (25-35) in Aqueous Trifluoroethanol Solution, Bulletin of Korean Chemical Society. 25(6):838-842.

47. Song YM, Yang ST, Lim SS, Kim Y, Hahm KS, Kim JI and Shin SY. (2004) Effects of L- or D-Pro incorporation into hydrophobic or hydrophilic helix face of amphipathic-helical model peptide on structure and cell selectivity, Biochemical and Biophysical Research Communications. 314(2):615-621.

46. Shim G, Shin J and Kim Y. (2004) Hydrogen Bonds in GlcNAc( β1,3)Gal( β)OMe in DMSO Studied by NMR Spectroscopy and Molecular Dynamics Simulations, Bulletin of Korean Chemical Society.25(2):198-202.

45. Lim SS, Song YM, Jang MH, Kim Y, Hahm KS and Shin SY. (2004) Effects of Two Glycine Residues in Positions 13 and 17 of Pleurocidin on Structure and Bacterial Cell Selectivity, Protein and Peptide Letters. 11(1):1-6.

[2003]

44. Park K, Shin SY, Hahm KS and Kim Y. (2003) Structural and Functional Characterization of CRAMP-18 Derived from a Cathelicidin-Related Antimicrobial Peptide CRAMP, Bulletin of Korean Chemical Society. 24(10):1478-1484.

43. Lee KH, Shin SY, Hong JE, Yang ST, Kim JI, Hahm KS and Kim Y. (2003) Solution structure of termite-derived antimicrobial peptide, spinigerin, as determined in SDS micelle by NMR spectroscopy, Biochemical and Biophysical Research Communications. 309(3):591-597.

42. Lee K, Lee S, Park NG and Kim Y. (2003) Structures of neuropeptide γ from goldfish and mammalian neuropeptide γ, as determined by 1H NMR spectroscopy

, Journal of Peptide Research.61(5):274-285.

[2002]

41. Shin SY, Lee K, Kim Y, Kim JI, Hahm KS and Kang SW. (2002) Structure-antibacterial activity relationship of cecropin a derivatives, Protein and Peptide Letters. 9(6):487-493.

40. Kang SW, Yang ST, Kim Y, Kim JI, Hahm KS and Shin SY. (2002) CRAMP analog having potent antibiotic activity without hemolytic activity, Protein and Peptide Letters. 9(4):275-282.

39. Jung J, Lim SK, Kim Y and Lee W. (2002) NMR structure of a minimum activity domain of human parathyroid peptide hormone: structural origin of receptor activation, Journal of Peptide Research.60(5):239-246.

38. Lee S, Lee D, Yang S, Kim Y, Kim J, Hahm K and Shin S. (2002) Antibiotic activity of reversed peptides of α-helical antimicrobial peptide, P18, Protein and Peptide Letters. 9(5):395-402.

37. Yang ST, Shin SY, Kim YC, Kim Y, Hahm KS and Kim JI. (2002) Conformation-dependent antibiotic activity of tritrpticin, a cathelicidin-derived antimicrobial peptide, Biochemical and Biophysical Research Communications. 296(5):1044-1050.

36. Yu K, Park K, Kang SW, Shin SY, Hahm KS and Kim Y. (2002) Solution Structure of a Cathelicidin-Derived Antimicrobial Peptide, CRAMP as Determined by NMR Spectroscopy, Journal of Peptide Research. 60(1):1-9.

35. Shin SY, Yang ST, Park EJ, Eom SH, Song WK, Kim Y, Hahm KS and Kim JI. (2002) Salt resistance and synergistic effect with vancomycin of alpha-helical antimicrobial peptide P18, Biochemical and Biophysical Research Communications. 290(1):558-562.

34. Park K, Oh D, Shin SY, Hahm KS and Kim Y. (2002) Structural studies of porcine myeloid antibacterial peptide PMAP-23 and its analogues in DPC micelles by NMR spectroscopy, Biochemical and Biophysical Research Communications. 290(1):204-212.

[2001]

33. Shin SY, Lee SH, Yang ST, Park EJ, Lee DG, Lee MK, Eom SH, Song WK, Kim Y, Hahm KS and Kim JI. (2001) Antibacterial, antitumor and hemolytic activities of a-helical antibiotics, Journal of Peptide Research. 58(6):504-514.

32. Park K, Baek D, Lim D, Park SD, Kim MY, Park YS and Kim Y. (2001) Design, Syntheses, and Conformational Study of Angiogenesis, Bulletin of Korean Chemical Society. 22(9):984-988.

31. Shin SY, Yang ST, Eom SH, Song WK, Kim Y, Hahm KS and Kim JI. (2001) Design of Dermaseptin S3 Analogues Having Bacterial cell Selectivity Without Mammalian Cell Toxicity, Protein and Peptide Letters. 8(4):281-288.

30. Shin SY, Park EJ, Yang ST, Jung HJ, Eom SH, Song WK, Kim Y, Hahm KS and Kim JI. (2001) Structure-activity analysis of SMAP-29, a sheep leukocytes-derived antimicrobial peptide, Biochemical and Biophysical Research Communications. 285(4):1046-1051.

29. Baek D, Kang JH, Shin SY, Hahm K and Kim Y. (2001) Structure Studies of Pulmonary Protein B(SP-B(3,4)) by NMR Spectroscopy and Molecular Modeling, Journal of the Korean Magnetic Resonance Society. 5(1):37.

28. Yu K, Kang S, Kim SD, Ryu PD and Kim Y. (2001) Interactions between Mastoparan B and the Membrane Studied by 1H NMR Spectroscopy, Journal of Biomolecular Strucure and Dynamics.18(4):595-606.

[2000]

27. Hong E, Jeong PY, Jung JW, Kim Y, Cheong C, Paik YK and Lee W. (2000) Solution structure of a designed amphiphatic antimicrobial synthetic peptide, PGAa, Biochemical and Biophysical Research Communications. 276(3):1278-1285.

26. Kim HS, Park CH, Cha SH, Lee JH, Lee S, Kim Y, Rah JC, Jeong SJ and Suh YH. (2000) C-terminal fragment of Alzheimer's APP Destabilize Calcium Homeostasis and Render Neuronal Cells Vulnerable to Excitotoxicity, FASEB Journal. 14(11):1508-1517.

25. Oh D, Shin SY, Lee S, Kang JH, Kim SD, Ryu PD, Hahm KS and Kim Y. (2000) Role of the hinge region and the tryptophan residue in the synthetic antimicrobial peptides, cecropin A(1-8)-magainin 2(1-12) and its analogues, on their antibiotic activities and structures, Biochemistry. 39(39):11855-11864.

24. Shin SY, Kang JH, Jang SY, Kim Y, Kim KL and Hahm JS. (2000) Effects of the hinge region of cecropin A(1-8)-magainin 2(1-12), a synthetic antimicrobial peptide on liposomes, bacterial and tumor cells, Biochimica et Biophysica Acta-Biomembranes. 1463(2):209-218.

23. Yu K, Cho EW, Shin SY, Kim KL and Kim Y. (2000) Tertiary Structure of PreSI(21-47) of Hepatitis B Virus Studied by NMR Spectroscopy, Journal of the Korean Magnetic Resonance Society. 4(1):41-49.

22. Yu K, Kang S, Park N, Shin J and Kim Y. (2000) Relationship between the Tertiary Structures of Mastoparan B and its Analogs and their Lytic Activities Studied by NMR spectroscopy, Journal of Peptide research. 55(1):51-65.

[1999]

21. Lee S and Kim Y. (1999) Solution Structure of Neuromedin B by 1H Nuclear Magnetic Resonance Spectroscopy, FEBS Letters. 460(2):263-269.

20. Lee S, Suh YH, Kim S and Kim Y. (1999) Comparison of the Structures of b Amyloid Peptide (25-35) and Substance P in Trifluoroethanol/Water Solution, Journal of Biomolecular Strucure and Dynamics. 17(2):1-11.

19. Oh D, Shin S, Kang J, Hahm KS, Kim K and Kim Y. (1999) NMR structural characterization of cecropin A(1-8)-magainin 2(1-12) and cecropin A(1-8)-melittin(1-12) hybrid peptides, Journal of peptide research. 53(5):578-589.

18. Cheong Y, Shim G, Kang D and Kim Y. (1999) Carbohydrate binding specificity of pea lectin studied by NMR spectroscopy and molecular dynamics simulations, Journal of Molecular Structure.475(2-3):219-232.

17. Jhon GJ, Park SY, Han SY, Lee S, Kim Y and Chang YS. (1999) Studies of the Chemical Structure of Gangliosides in Deer Antler; Cervus nippon, Chemical Pharmaceutical Bulletin. 47(1):123-127.

[1998]

16. Kim S, Bang E and Kim Y. (1998) Conformation of Substance P in Neutral Phospholipid Micelles, Journal of Korean Magnetic Resonance. 2(1):41-49.

15. Lee K, Lee S, Jhon GJ and Kim Y (1998) Tertiary Structure of Ganglioside GA1 Determined by NMR Spectroscopy, Bulletin of Korean Chemical Society. 19(5):566-575.

14. Shin SY, Kang JH, Lee MK, Kim SY, Kim Y and Hahm KS. (1998) Cecropin A - Magainin Hybrid Peptides Having Potent Antimicrobial Activity with Low Hemolytic Effect, Biochemistry and Molecular Biology International. 44(6):1119-1126.

[1997]

13. Oswood MC, Kim Y, Ohlrogge JB and Prestegard JH. (1997) Structural Homology of Spinach ACP and Escherichia coli ACP Based on NMR Data, Proteins. 27(1):131-143.

12. Shim G, Lee S and Kim Y. (1997) Motional Properties in the Structure of GlcNAc(β1,3)Gal(β)OMe Studied by NMR Spectroscopy and Molecular Modeling, Bulletin of Korean Chemical Society. 18(4):415-424.

[1996]

11. Lee K and Kim Y. (1996) Exchangeable Protons as Sources of Long-Range Constraints in Conformational Analysis of GA1 by NMR Spectroscopy, Bulletin of Korean Chemical Society. 17(2):118-120.

10. Oh J, Kim Y and Won Y. (1996) Conformational Analysis and Molecular Dynamics Simulation of Lactose, Bulletin of Korean Chemical Society. 16(12):1153-1162.

[1995]

9. Lee K, Jhon G, Rhyu G, Bang E, Choi B and Kim Y. (1995) Assignment of 1H and 13C Nuclear Magnetic Resonances of Ganglioside GA1, Bulletin of Korean Chemical Society. 16(9):864-869.

[1992]

8. Bevilacqua VL, Kim Y and Prestegard JH. (1992) Conformation of β-methyl Melibiose Bound to the Ricin B-Chain as Determined from Transferred Nuclear Overhauser Effect, Biochemistry. 31(39):9339-9349.

[1990]

7. Kim Y and Prestegard JH. (1990) Refinement of the NMR Structures from Acyl Carrier Protein with Scalar Coupling Data, Proteins. 8(4):377-385.

6. Kim Y and Prestegard JH. (1990) Demonstration of a Conformational Equilibrium in Acyl Carrier Protein from Spinach Using Rotating Frame Nuclear Magnetic Resonance Spectroscopy, Journal of the American Chemical Society. 112(9):3707-3709.

5. Kim Y, Ohlrogge JB and Prestegard JH. (1990) Motional Effects on NMR Structural Data: A Comparison of Spinach and Escherichia coli Acyl Carrier Proteins, Biochemical Pharmacology.40(1):7-13.

[1989]

4. Kim Y and Prestegard JH. (1989) A Dynamic Model for the Structure of Acyl Carrier Protein in Solution, Biochemistry. 28(22):8792-8797.

3. Kim Y and Prestegard JH. (1989) Measurement of Vicinal Couplings from Cross Peaks in COSY Spectra, Journal of Magnetic Resonance. 84(1):9-13.

2. Kim Y and Cho U. (1989) Model Simulation of a HF Chemical Laser and Numerical Analyses of It's Behaviors, Journal of the Korean Chemical Society. 33(2):168-176.

[1988]

1. Holak TA, Kearsley SK, Kim Y and Prestegard JH. (1988) Three-Dimensional Structure of Acyl Carrier Protein Determined by NMR Pseudoenergy and Distance Geometry Calculation, Biochemistry.27(16):6135-6142.

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