x.parent
the parent Protein
x.atoms
atom list, redundant with a subset of the parent Protein
x.res_type1
a one letter representation for the amino acid type
x.res_number
the residue number from the PDB file
x.has_central_point
boolean - 1 if an alpha carbon is present, else 0
x.atoms_dict
a dictionary of atoms, indexed by atom number
x.mw
molecular weight
x.is_Nterm
is either N-terminal or is next to an unresolved region
x.is_Cterm
see x.is_Nterm
x.vtk_arg_list
visualization arguments. Described in MolecularViewer.
x.visible
1 if visible in MolecularViewer, else 0
x.transparent
1 if transparent in MolecularViewer, else 0
x.get_res_number()
returns x.res_number
x.get_average_sidechain_position()
returns a x,y,z triple center of mass
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