Publication

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First- and/or Corresponding authored articles

1.     Lee H, Friedman MJ, Kim SB, Oh S.  DNA regulatory element cooperation and competition in transcription. BMB Reports, 2024;57:509-520.

2.     Friedman, M.J., Wagner, T., Lee, H., Rosenfeld, M.G+. and Oh, S+., 2024. Enhancer–promoter specificity in gene transcription: molecular mechanisms and disease associations. Experimental & Molecular Medicine, pp.1-16. (+denotes co-corresponding author)

3.     Friedman, M.J., Lee, H., Lee, J.Y+. and Oh, S+., 2023. Transcriptional and epigenetic regulation of context-dependent plasticity in T-helper lineages. Immune Network, 23(1). (+denotes co-corresponding author)

4.     Roh, S., Lee, T., Kim, Y., Oh, S+. and Lee, G+., 2023. Direct observation of surface charge and stiffness of human metaphase chromosomes. Nanoscale Advances, 5(2), pp.368-377. (+denotes co-corresponding author)

5.     Friedman, M.J., Lee, H., Kwon, Y.C. and Oh, S., 2022. Dynamics of Viral and Host 3D Genome Structure upon Infection. Journal of Microbiology and Biotechnology, 32(12), pp.1515-1526.

6.     Oh, S., Shao, J., Mitra, J., …. Li, W., And M. G. Rosenfeld. Enhancer Release and Retargeting (ERR) Activates Disease Susceptibility Genes. Nature., 595 (7869), 735-740, 2021

7.     LI, W*., HU, Y*., Oh, S*., MA, Q., MERKURJEV, D., SONG, X., ZHOU, X., LIU, Z., TANASA, B., HE, X., CHEN, A. Y., OHGI, K., ZHANG, J., LIU, W. & ROSENFELD, M. G. 2015. Condensin I and II Complexes License Full Estrogen Receptor alpha- Dependent Enhancer Activation. Mol Cell., 59, 188-202. (* denotes co-first author)

8.     ZHAO, Z*., Oh, S*., LI, D., NI, D., PIROOZ, S. D., LEE, J. H., YANG, S., LEE, J. Y., GHOZALLI, I., COSTANZO, V., STARK, J. M. & LIANG, C. 2012. A dual role for UVRAG in maintaining chromosomal stability independent of autophagy. Dev Cell., 22, 1001-16. (* denotes co-first author)

9.     PIROOZ, S. D., LEE, J. H., ZHAO, Z., NI, D., Oh, S+. & LIANG, C+. 2011. Measurement of gammaHV68 infection in mice. J Vis Exp., (57). 3472. (+denotes co-corresponding author)

10.     Oh, S*., XIAOFEI, E*., NI, D., PIROOZ, S. D., LEE, J. Y., LEE, D., ZHAO, Z., LEE, S., LEE, H., KU, B., KOWALIK, T., MARTIN, S. E., OH, B. H., JUNG, J. U. & LIANG, C. 2011b. Downregulation of autophagy by Bcl-2 promotes MCF7 breast cancer cell growth independent of its inhibition of apoptosis. Cell Death Differ., 18, 452-64. (* denotes co-first author)

11.  Oh, S., PIROOZ, S. D., NI, D., ZHAO, Z. & LIANG, C. 2011a. Anti-autophagic Bcl-2: Not just an innocent bystander. (punctum), Autophagy., 7, 231-2.

12.  Oh, S., E, X., HWANG, S. & LIANG, C. 2010. Autophagy evasion in herpesviral latency. (punctum), Autophagy., 6, 151-2.

13. E, X*., HWANG, S*., Oh, S*., LEE, J. S., JEONG, J. H., GWACK, Y., KOWALIK, T. F., SUN, R., JUNG, J. U. & LIANG, C. 2009. Viral Bcl-2-mediated evasion of autophagy aids chronic infection of gammaherpesvirus 68. PLoS Pathog., 5, e1000609. (* denotes co-first author) 

Co-authored articles

1. Wang L, Yuan W, Gamliel A, Ma W, Lee S, Tan Y, Chen Z, Taylor H, Ohgi K, Oh S, Aggarwal AK. An eRNA transcription checkpoint for diverse signal-dependent enhancer activation programs. Nature Genetics. 2025 Apr 4:1-1.

2. Song Y, Kong H, Oh S, Kim SB. Plant-derived extracellular vesicles as nanocarriers for combination therapy enhancing paclitaxel-based regimens in breast cancer. BMB reports. 2025 Feb 12;58(2):53.

3. Park JS, Lee J, Wang F, Ma H, Zhou Z, Lee YS, Oh K, Lee H, Sui G, Lee S, Yang YM. A1AT dysregulation of metabolically stressed hepatocytes by Kupffer cells drives MASH and fibrosis. Experimental & Molecular Medicine. 2025 Feb 12:1-6.

4. Kim Y, Kim SB, Lee H, Kim D, Bak SS, Yoon I, Cho S, Jeong SJ, Jeon Y, Kim J, Kim JH. AIMP1-Derived Peptide Secreted from Hair Follicle Stem Cells Promotes Hair Growth by Activating Dermal Papilla Cells. International Journal of Biological Sciences. 2024 Oct 21;20(14):5764.

5. Vinh, L. B., Shin, S. H., Han, Y. K., Kim, Y. J., Cuong, N. C., Oh, S., & Lee, K. Y. (2024). Identification of Interleukin (IL)-33 Inhibitory Constituents from Canavalia gladiata Pods. Antioxidants, 13(7), 767.

6. Ahn M, Park SE, Choi J, Choi J, Choi D, An D, Jeon H, Oh S, Lee K, Kim J, Jang J. Synthesis and biological evaluation of flavonoid-based IP6K2 inhibitors. Journal of Enzyme Inhibition and Medicinal Chemistry. 2023 Dec 31;38(1):2193866.

7. Gamliel, A., Meluzzi, D., Oh, S., Jiang, N., Destici, E., Rosenfeld, M.G. and Nair, S.J., 2022. Long-distance association of topological boundaries through nuclear condensates. Proc Natl Acad Sci U S A., 119(32), p.e2206216119. (Impact Factor: 9.412)

8. MA, Q., YANG, F., MACKINTOSH, C., JAYANI, R. S., OH, S., JIN, C., NAIR, S. J., MERKURJEV, D., MA, W., ALLEN, S., WANG, D., ALMENAR-QUERALT, A. & GARCIA-BASSETS, I. 2020. Super-Enhancer Redistribution as a Mechanism of Broad Gene Dysregulation in Repeatedly Drug-Treated Cancer Cells. Cell Rep., 31, 107532. (Impact Factor: 8.109)

9. PARK, A., OH, S., JUNG, K. L., CHOI, U. Y., LEE, H. R., ROSENFELD, M. G. & JUNG, J. U. 2020. Global epigenomic analysis of KSHV-infected primary effusion lymphoma identifies functional MYC superenhancers and enhancer RNAs. Proc Natl Acad Sci U S A., 117, 21618-21627. (Impact Factor: 9.412)

10.  NAIR, S. J., YANG, L., MELUZZI, D., OH, S., YANG, F., FRIEDMAN, M. J., WANG, S., SUTER, T., ALSHAREEDAH, I., GAMLIEL, A., MA, Q., ZHANG, J., HU, Y., TAN, Y., OHGI, K. A., JAYANI, R. S., BANERJEE, P. R., AGGARWAL, A. K. & ROSENFELD, M. G. 2019. Phase separation of ligand-activated enhancers licenses cooperative chromosomal enhancer assembly. Nat Struct Mol Biol., 26, 193-203. (Impact Factor: 11.98)

11.  TAN, Y., JIN, C., MA, W., HU, Y., TANASA, B., OH, S., GAMLIEL, A., MA, Q., YAO, L., ZHANG, J., OHGI, K., LIU, W., AGGARWAL, A. K. & ROSENFELD, M. G. 2018. Dismissal of RNA Polymerase II Underlies a Large Ligand-Induced Enhancer Decommissioning Program. Mol Cell., 71, 526-539.e8. (Impact Factor: 15.584)

12.  YI, E., OH, J., GIAO, N. Q., OH, S. & PARK, S. H. 2017. Enhanced production of enveloped viruses in BST-2-deficient cell lines. Biotechnol Bioeng., 114, 2289-2297. (Impact Factor: 4.002)

13.  TELESE, F., MA, Q., PEREZ, P., NOTANI, D., OH, S., LI, W., COMOLETTI, D., OHGI, K., TAYLOR, H. & ROSENFELD, M. 2015a. LRP8-Reelin-Regulated Neuronal Enhancer Signature Underlying Learning and Memory Formation. Neuron, 86, 696-710. (Impact Factor: 14.403)

14.  LEE, J. Y., SKON, C. N., LEE, Y. J., OH, S., TAYLOR, J. J., MALHOTRA, D., JENKINS, M. K., ROSENFELD, M. G., HOGQUIST, K. A. & JAMESON, S. C. 2015. The transcription factor KLF2 restrains CD4(+) T follicular helper cell differentiation. Immunity., 42, 252-264. (Impact Factor: 21.522)

15.  HE, S., ZHAO, Z., YANG, Y., O'CONNELL, D., ZHANG, X., OH, S., MA, B., LEE, J. H., ZHANG, T., VARGHESE, B., YIP, J., DOLATSHAHI PIROOZ, S., LI, M., ZHANG, Y., LI, G. M., ELLEN MARTIN, S., MACHIDA, K. & LIANG, C. 2015. Truncating mutation in the autophagy gene UVRAG confers oncogenic properties and chemosensitivity in colorectal cancers. Nat Commun., 6:7839. (Impact Factor: 12.121)

16.  LIU, Z., MERKURJEV, D., YANG, F., LI, W., OH, S., FRIEDMAN, M. J., SONG, X., ZHANG, F., MA, Q., OHGI, K. A., KRONES, A. & ROSENFELD, M. G. 2014. Enhancer activation requires trans-recruitment of a mega transcription factor complex. Cell., 159, 358-73. (Impact Factor: 36.216)

17.  JIN, C., YANG, L., XIE, M., LIN, C., MERKURJEV, D., YANG, J. C., TANASA, B., OH, S., ZHANG, J., OHGI, K. A., ZHOU, H., LI, W., EVANS, C. P., DING, S. & ROSENFELD, M. G. 2014. Chem-seq permits identification of genomic targets of drugs against androgen receptor regulation selected by functional phenotypic screens. Proc Natl Acad Sci U S A., 111, 9235-40. (Impact Factor: 9.412)

18.  LI, W., NOTANI, D., MA, Q., TANASA, B., NUNEZ, E., CHEN, A. Y., MERKURJEV, D., ZHANG, J., OHGI, K., SONG, X., OH, S., KIM, H. S., GLASS, C. K. & ROSENFELD, M. G. 2013. Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation. Nature., 498, 516-20. doi: 10.1038/nature12210. (Impact Factor: 42.778)

19.  HE, S., NI, D., MA, B., LEE, J. H., ZHANG, T., GHOZALLI, I., PIROOZ, S. D., ZHAO, Z., BHARATHAM, N., LI, B., OH, S., LEE, W. H., TAKAHASHI, Y., WANG, H. G., MINASSIAN, A., FENG, P., DERETIC, V., PEPPERKOK, R., TAGAYA, M., YOON, H. S. & LIANG, C. 2013. PtdIns(3)P-bound UVRAG coordinates Golgi-ER retrograde and Atg9 transport by differential interactions with the ER tether and the beclin 1 complex. Nat Cell Biol., 15, 1206-1219. (Impact Factor: 20.042)

20.  JEONG, J. H., BHATIA, A., TOTH, Z., OH, S., INN, K. S., LIAO, C. P., ROY-BURMAN, P., MELAMED, J., COETZEE, G. A. & JUNG, J. U. 2011. TPL2/COT/MAP3K8 (TPL2) activation promotes androgen depletion-independent (ADI) prostate cancer growth. PLoS One., 6, e16205. (Impact Factor: 2.74)

21.  LEE, H., HONG, C., SHIN, J., OH, S., JUNG, S., PARK, Y. K., HONG, S., LEE, G. R. & PARK, S. H. 2009. The presence of CD8+ invariant NKT cells in mice. Exp Mol Med., 41, 866-72. (Impact Factor: 5.063)