Publications

Publication in Journals

2020

· R Chatterjee, B Ghosh, M Mandal, D Nawn, S Banerjee, M Pal, RR Paul, S Banerjee, J Chatterjee, "Pathophysiological relationship between hypoxia associated oxidative stress, Epithelial-mesenchymal transition, stemness acquisition and alteration of Shh/ Gli-1 axis during oral sub-mucous fibrosis and oral squamous cell carcinoma" European Journal of Cell Biology (2020), doi: https://doi.org/10.1016/j.ejcb.2020.151146

· S Banerjee, SRK Yabalooru and D Karunagaran, “Identification of mRNA and non-coding RNA hubs using network analysis in organ tropism regulated triple negative breast cancer metastasis” Computers in Biology and Medicine, 127: 2020, 104076 (Link - https://www.sciencedirect.com/science/article/abs/pii/S0010482520304078?via%3Dihub)

· S KrishnaPriya, S Banerjee*, Dn Karunagaran, and G. K. Suraishkumar “An integrated approach for understanding Fluid Shear Stress–driven and Reactive Oxygen Species–mediated colon cancer metastasis through mRNA-miRNA-lncRNA-circRNA networks" Manuscript Under Preparation

2019

· S Banerjee and D Karunagaran. “An Integrated Approach for Mining Precise RNA-based Cervical Cancer Staging Biomarkers” Gene, 712: 2019 (Link - www.sciencedirect.com/science/article/pii/S0378111919306110?via%3Dihub )

2018

· A.G. Mazumder, S. Banerjee, F. Zevictovich, S. Ghosh, A. Mukherjee, J. Chatterjee. “Fourier-Transform-Infrared-Spectroscopy based Metabolomic Spectral Biomarker Selection towards Optimal Diagnostic Differentiation of Diabetes with and without Retinopathy” Spectroscopy Letters 51.7 (2018): 340-349. (Link - https://www.tandfonline.com/doi/full/10.1080/00387010.2018.1471510)

2017

· A Barik, S Banerjee, S Dhara and N Chakravorty, “A Reductionist Approach to Extract Robust Molecular Markers from Microarray Data Series - Isolating Markers to Track Osseointegration” Journal of Biomedical Informatics 68 (2017): 104-111. (Link - https://www.sciencedirect.com/science/article/pii/S1532046417300540?via%3Dihub)

2016

· S Banerjee^*, A Anura, J Chakrabarty, S Sengupta, J Chatterjee. “Identification and functional assessment of novel gene sets towards better understanding of dysplasia associated oral carcinogenesis” Gene Reports 4 (2016): 131-138. (Link - https://www.sciencedirect.com/science/article/pii/S2452014416300243)

· S Banerjee^*, S Chatterjee, A Anura, J Chakrabarty, M Pal, B Ghosh, R R Paul, D Sheet, J Chatterjee. “Global Spectral and Local Molecular Connects with Optical Coherence Tomography Features to Classify Oral Lesions towards Unraveling Quantitative Imaging Bio-markers” RSC Advances 6.9 (2016): 7511- 7520. (Link - https://pubs.rsc.org/en/content/articlelanding/ra/2016/c5ra24117k#!divAbstract)

· S Banerjee^*, Aishwaryaprajna, D Chakraborty, A Giri, R Ghosh, B C Sarkar and J Chatterjee. “Application of Fuzzy Logic for Assessing Oral Precancer and Cancer Susceptibility‟, Egyptian Informatics Journal 17. 3 (2016): 251–263. (Link - https://www.sciencedirect.com/science/article/pii/S1110866516000037)

· HH Chen, V Bobroff, M Delugin, R Pineau, R Noreen, Y Seydou, S Banerjee, J Chatterjee, S Javerzat and C Petibois. “The future of infrared spectroscopy in biosciences: in vitro, time-resolved, and 3D” Acta Phys Pol A 129.2 (2016): 255-259. (Link - http://psjd.icm.edu.pl/psjd/element/bwmeta1.element.bwnjournal-article-appv129n226kz)

2015

· S Banerjee^*, M Pal, J Chakrabarty, C Petibois, RR Paul, A Giri, and J Chatterjee. "Fourier- transform infrared-spectroscopy based spectral-biomarker selection towards optimum diagnostic differentiation of oral leukoplakia and cancer." Analytical and bioanalytical chemistry 407. 26 (2015): 7935- 7943. (Link - https://link.springer.com/article/10.1007%2Fs00216-015-8960-3 https://link.springer.com/article/10.1007%2Fs00216-015-8960-3)

· S Banerjee^* and J Chatterjee "Molecular Pathology Signatures in Predicting Malignant Potentiality of Dysplastic Oral Pre-cancers." Springer Science Reviews 3.2 (2015): 127-136. (Link - https://link.springer.com/article/10.1007/s40362-015-0033-7)

2014

· S Banerjee^* and J Chatterjee. "Efficient extraction strategies of tea (Camellia sinensis) biomolecules." Journal of Food Science and Technology 52.6 (2014): 3158-3168. (Link - https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4444893/)

2012

· N Sarkar, SK Ghosh, S Banerjee and K Aikat. "Bioethanol production from agricultural wastes: An overview." Renewable Energy 37.1 (2012): 19-27. (Link - https://www.sciencedirect.com/science/article/pii/S096014811100382X)

· S Banerjee and A Mitra “Changing landscape of herbal medicine: Technology attributing renaissance” International Journal of Pharmacy and Pharmaceutical Sciences, 4 (1) (2012): 47- 52. (Link - https://pdfs.semanticscholar.org/b510/1f758e70a16c1bf4ceedeaad25fa06a30933.pdf)

· KR Dutta, S Banerjee, A Mitra “Medicinal plants of West midnapore, India: emphasis on phytochemical containment having role on oral cancer” International Journal of Phytopharmacology y. 3.2, (2012): 198-208. (Link - http://www.onlineijp.com/download.php?f=150_198-208.pdf&id=150)

Book Chapter

· S Banerjee and J Chatterjee, “Phytochemicals, functional food and nutraceuticals for oral cancer chemoprevention” Invited Book Chapter for ‘Food Engineering Emerging Issues, Modelling and Applications’ (Nov, 2016 as part of book series on Innovations in Agricultural and Biological Engineering), Apple Academic Press, E-Book ISBN: 9781315366258, Pages 166-187. (Link - http://www.appleacademicpress.com/food-engineering-emerging-issues-modeling-and-applications/9781771883689)

· S Banerjee, SK Ghosh, N Sarkar, K Aikat , “Complete commercial utilization of Sugarcane: A boost to rural economy” Integrated Rural Development and Management : Issues Strategies and Policy Options, edited by Debabrata Dasgupta, Amal Kr. Mallick, Prakash Kanti Das, Amitava Dutta, Rupak Goswami and Md. Nasim Ali,: pages 172-181; Agrobios Publisher, India, 2012., ISBN: 9788177544831

Conference Paper

· S Banerjee, S Chatterjee, S. P. K. Karri, M Pal, R R Paul and J Chatterjee, “Multimodal Diagnostic Segregation of Oral Leukoplakia and Cancer‟ International Conference on Systems in Medicine and Biology (ICSMB), Kharagpur, 2016, pp. 95-97. (IEEE Xplore) (Link - https://ieeexplore.ieee.org/document/7915089)

· S Banerjee and J.Chatterjee, “Functional Stratification of Biomarkers Selected from Microarray Data of Oral Leukoplakia and Cancer‟ International Conference on Systems in Medicine and Biology (ICSMB), Kharagpur, 2016, pp. 67-70.(IEEE Xplore) (Link - https://ieeexplore.ieee.org/stamp/stamp.jsp?arnumber=7915096)

· D Sheet, S Banerjee, SPK Karri, S Bag, A Anura, A Giri, RR Paul et al. "Transfer learning of tissue photon interaction in optical coherence tomography towards in vivo histology of the oral mucosa." 2014 IEEE 11th International Symposium on Biomedical Imaging (ISBI), pp. 1389-1392. (IEEE Xplore) (Link - https://ieeexplore.ieee.org/document/6868137)

· N Sarkar, SK Ghosh, S Banerjee, K Aikat. Effect of Temperature and Incubation Period in Enzymatic Hydrolysis of Rice Straw for the Production of Reducing sugars by locally isolated Bacillus strain,Procedeeings of National Conference on Biotechnology and the Environment organized by the Department of Biotechnology, National Institute of Technology, Durgapur, India during October 4-5, 2010.

Conference Abstracts

· S Krishna Priya, S Banerjee, D Karunagaran, and G. K. Suraishkumar “Understanding the Association of RNA Hubs in Fluid Shear Stress and Reactive Oxygen Species Mediated Colon Cancer Metastasis” in Proceedings of 8th International Conference on Translational Cancer Research held in Benaras Hindu University, 13-16 February, 2020. pp - 151

· S Banerjee and D Karunagaran “Identification of Regulatory miRNAs in Cervical Cancer Metastasis” in Proceedings of International Conference on Emerging Areas of Biotechnology for Human Welfare and Bioentrepreneurship held in B.S. Abdur Rahman Crescent Institute of Science and Technology, Chennai, India. 11-12, September, 2018. pp – 62.

· SRK Yabalooru, S Banerjee and D Karunagaran “Resolving pathways associated in breast carcinogenesis irrespective of hormone receptor status from functional genomics perspectives” in Proceedings of International Conference on Emerging Areas of Biotechnology for Human Welfare and Bioentrepreneurship held in B.S. Abdur Rahman Crescent Institute of Science and Technology, Chennai, India. 11-12, September, 2018. pp – 63.

· S Banerjee and D Karunagaran “Exploiting Molecular Pathways for Unravelling Breast Cancer Associated Brain Metastasis” in Proceedings of 7^th International Conference on Translational Cancer Research held in Chennai, 08-11 February, 2018. pp - 147.

· C Kishore, S Banerjee and D Karunagaran “Molecular Pathways and Biological Processes Regulated by Menadione in Colon Cancer” in Proceedings of 7^th International Conference on Translational Cancer Research held in Chennai, 08-11 February, 2018. pp - 92.

· P Sharma, S Banerjee and D Karunagaran “Unravelling Pathways Associated with Target miRNAs of High-Mobility-Group Proteins through the miRNA-mRNA Network” in Proceedings of 7^th International Conference on Translational Cancer Research held in Chennai, 08-11 February, 2018. pp - 133. (Best Poster Award)

· P Yadav, S Banerjee and D Karunagaran “Role of micro-RNAs in the Regulation of Ferroptosis in Mammary Gland” in Proceedings of 7^th International Conference on Translational Cancer Research held in Chennai, 08-11 February, 2018. pp - 131.

· S Banerjee, J Chakrabarty, M Pal, RR Paul, and J Chatterjee, “Fourier Transform Infrared Spectroscopic Spectral Feature Subset Selection for Optimal Diagnosis of Oral Lesion “Presented in 251st ACS National Meeting & Exposition, on March 13-17, 2016 in San Diego, CA, USA. (Link - https://apps.webofknowledge.com/full_record.do?product=WOS&search_mode=GeneralSearch&qid=1&SID=E5fPknhLR3B6fIH3uUF&page=1&doc=1)

· S Banerjee, D Sheet, A Giri, R Ghosh, M Pal, RR Paul, and J Chatterjee, “Optical Coherence Tomographic Attenuation Imaging Based Oral Precancer Diagnosis" Head & Neck. 37: E133, Jul 2015 (Oral Presentation in 5th World Congress of International Academy of Oral Oncology, 8-11 July 2015, Sao Paulo, Brazil) (Link - https://onlinelibrary.wiley.com/doi/abs/10.1002/hed.24138)

· S Banerjee, D Sheet, RK. Das, A Anura, S Bag, A Giri, RR Paul, M Pal, B Sarkar, R Ghosh, B Ghosh, and J Chatterjee, “Recognizing Pathobiological Signatures of Oral Precancers through Multimodal Imaging” Indian Journal of Cancer Supplementary, Nov 2013, Volume 50, Supplement 1, S-221. Presented in 1st Indian Cancer Congress. 21 - 24 Nov. Kempinski Ambience Hotel, Delhi, India.

· S Banerjee, D Sheet, A Giri, B Sarkar, R Ghosh, and J Chatterjee, “Clinicoepidemiological perspectives of oral precancers and cancers in North Bengal, India.” Indian Journal of Cancer Supplementary, Nov 2013, Volume50, Supplement 1, S-158. Presented in 1st Indian Cancer Congress. 21 - 24 Nov. Kempinski Ambience Hotel, Delhi, India.

· SK Ghosh, S Banerjee, N Sarkar, K Aikat, “Acid Treatment of Sugar-cane Bagasse: A critical step for Bio- ethanol production,” International Conference on Applications of Renewable and Sustainable Energy for Industry and Society organized by the Department of Physics, Osmania University, Hyderabad, India during December 16-18, 2010.

· SK Ghosh, S Banerjee, N Sarkar, K Aikat, “Fermentable Sugars from Sugar-cane Bagasse… Economic Management of an Agro-industrial Waste” on “8th All India People’s Technology Congress” organized by the Forum of Scientists, Engineers and Technologists (FOSET), Science City, Kolkata, India during February 11- 12, 2010.

· SK Ghosh, S Banerjee, K Aikat. "Detoxification of Acid Hydrolysate of Sugarcane Bagasse for the Removal of Furfural" at the National Conference on Industrial Engineering, Organized by West Bengal University of Technology, Kolkata during February 17-18, 2011.

· SK Ghosh, S Banerjee and K Aikat. "Comparative Study of Three Lignocellulosic Substrates for Bioethanol Production" 18th State Science & Technology Congress, West Bengal, held from 28th February, 2011 to 1st March, 2011 at the Ramakrishna Mission Ashrama, Vivekananda Centenary Hall, Narendrapur, Kolkata: 700103 (Conferred Best Paper Award in Oral Presentation Category)