Publications
Peer-Reviewed Publications
[W&M undergraduate author is underlined and bolded and *. Graduate students indicated with bold and **]
Willner, D.L., Paudel, S**., Halleran, A.D., Solini, G.E., Gray, V., & Saha, M.S. (2024). Transcriptional dynamics during Rhodococcus erythropolis infection with phage WC1. BMC Microbiol 24, 107. https://doi.org/10.1186/s12866-024-03241-4
Sudip Paudel,** Michelle Yue,* Rithvik Nalamalapu*, Margaret S. Saha, (2024). Deciphering the Calcium Code: A Review of Calcium Activity Analysis Methods Employed to Identify Meaningful Activity in Early Neural Development, Biomolecules 14(1) 2024 Jan 22;14(1):138.
Kate B. R. Carline*, Megan S. Fleeharty*, Lin Fang*, Mahima Shijo*, Mitchell K. Doherty*, Zoe A. Riddick*, Marcus O. Royster*, Amiyah R. Stukes*, Bilalay V. Tchadi*, Alana N. Thomas*, Kurt E. Williamson and Margaret S. Saha (2024). Sequence analysis of Discoknowium, an A5 mycobacteriophage. Microbiology Resource Announcements, Dec.2023, Vol 13 (1)
Bolkhovitinov, L*,Weselman, B.T.*, Shaw, G.A*., Dong, C*., Giribhattanavar, J.*, and Saha, M.S.. (2022). Tissue Rotation of the Xenopus Anterior-Posterior Neural Axis Reveals Profound but Transient Plasticity at the Mid-Gastrula Stage. J. Dev. Biol., 2022, 10, 38. https://doi.org/10.3390/jdb10030038..
Kallurkar, P.S., Picardo, M.C.D., Sugimura, Y.K., Saha, M.S., Conradi Smith, G.D., Del Negro, C.A. Transcriptomes of electrophysiologically recorded Dbx1-derived respiratory neurons of the preBötzinger complex in neonatal mice. Sci Rep 12, 2923 (2022). https://doi.org/10.1038/s41598-022-06834-z
David, C.K*., Sugimura, Y.K., Kallurkar, P.S., Picardo, M.C., Saha, M.S., Conradi Smith, G.D., Del Negro, C.A. Single cell transcriptome sequencing of inspiratory neurons of the preBötzinger complex in neonatal mice. Sci Data 9, 457 (2022). https://doi.org/10.1038/s41597-022-01569-y
Nalamalapu RR*, Yue M*, Stone AR*, Murphy S*, Saha MS. (2021). The tweety gene faily: From Embryo to Disease. Front Mol Neurosci. 2021 Jun 28;14:672511. doi: 10.3389/fnmol.2021.672511. eCollection 2021.
Ramsey J., … Saha M., … Lu J (37 authors). (2021). Crowdsourcing biocuration: The Community Assessment of Community Annotation with Ontologies (CACAO). PLoS Comput Biol2021 Oct 28;17(10):e1009463. doi: 10.1371/journal.pcbi.1009463.eCollection 2021 Oct.
Li E*, Saha MS. (2021). Optimizing calcium detection methods in animal systems: A sandbox for synthetic biology. Biomolecules Biomolecules , 11(3), 343; https://doi.org/10.3390/biom11030343
Beal, J. (2021). (crowd-sourced iGEM publication), Comparative analysis of three studies measuring fluorescence from engineered bacterial genetic constructs. PLOS ONE, https://doi.org/10.1371/journal.pone.0252263 June 7, 2021. William and Mary: Eric Bradley, Stephanie Do, Xiangyi Fang*, Ethan Jones*, Jessica Laury*, Wukun Liu*, Adam Oliver*, Lillian Parr*, Mainak Patel, Margaret Saha, Chengwu Shen*, Tinh Son*, Julia Urban*, Yashna Verma*, Hanmi Zhou*
Scoville SA, Varian-Ramos CW, Adkins GA*, Swaddle JP, Saha MS, Cristol DA. (2020). Mercury delays cerebellar development in a model songbird species, the zebra finch. Ecotoxicology Oct;29(8):1128-1137. doi: 10.1007/s10646-020-02270-9.Epub 2020 Aug 22.
Beal J, Farny NG, Haddock-Angelli, Selvarajah V., Baldwin GS, Buckley-Taylor R, Gershater, M., Kiga D, Marken J, Sanchania V., Sison A., Workman CT, & iGEM Interlab Study Contributors [includes all undergraduate members of the iGEM team and Saha M. (2020) Robust estimation of bacterial cell count from optical density. Communications Biology 3, Article number: 512.
Ablondi EF*, Paudel S#, Sehdev M,* Marken JP*, Halleran AD*, Rahman A, Kemper P, Saha MS. (2020). Fluorescent Calcium Imaging and Subsequent In Situ Hybridization for Neuronal Precursor Characterization in Xenopus laevis. Journal of Visualized Experiments JoVE. e60726, doi:10.3791/60726
Solini GE*, Pownall ME*, Hillenbrand MJ*, Tocheny CE*, Paudel S#, Halleran AD*, Bianchi CH#, Huyck RW#, Saha MS (2020). Xenopus embryos show a compensatory resonse following perturbation of the Notch signaling pathway. Dev Biol. Vol. 460, Issue 2, 15 April 2020, pp. 99-107
Paudel S**#, Ablondi E,*# Sehdev M*, Marken J*, Halleran A*, **Rahman A, Kemper P, Saha MS., (2019). Calcium Activity Dynamics Correlate with Neuronal Phenotype at a Single Cell Level and in a Threshold-Dependent Manner. Int. J. Mol. Sci-Fi. April 16:20(8): doi: 10.3390/ijms20081880. # co -first authors; Underline bold = undergraduate authors; *graduate student authors
Picardo MCD, Sugimura YK, Dorst KE*, Kallurkar PS, Akins VT, Ma X, Teruyama R, Guinamard R, Kam K, Saha MS, Del Negro C. (2019) Trpm4 ion channels in pre-Bötzinger complex interneurons are essential for breathing motor pattern but not rhythm. PLoS Biol 17(2): e2006094. https://doi.org/10.1371/journal.pbio.2006094
Rahn, J, WIllner D, Deverick J., Kemper P, Saha M. (2019). Incorporating Computer Programming and Data Science into a Guided Inquiry-Based Undergraduate Ecology Lab. The American Biology Teacher 81 (9), 649-657.
Sudip Paudel**#, Regan Sindalar* #, Margaret Saha, (2018). "Calcium Signaling in Vertebrate Development and Its Role in Disease," International Journal of Molecular Science, 11(11), 3390 https://doi.org/10.3390/ijms19113390. #Contributed equally.
Dong, C.*, Paudel, S**., Amoh, N*., Saha, M.S. (2018) Expression of trpv channels during Xenopus laevis embryogeneis. Gene Expression Patterns, Dec. 30: 64-70.
Kalen Clifton *, Ethan Jones *, Sudip Paudel**, John Marken *, Callan Monette *, Andrew Halleran *, Lidia Epp, Margaret Saha, (2018). The Genetics Insulator RiboJ Increases Expression of Insulated Genes, Journal of Biological Engineering, 12:23 Oct. 29, doi: 10.1186/s13036-018-0115-6 (2018)
ME Pownall * & MS Saha, (2018). "Histological observation of teratogenic phenotypes induced in frog embryo
assays," Methods in Molecular Biology 1797:309-323. doi: 10.1007/978-1-4939-7883-0_16.
Pownall, ME*, Cutler RR*, Saha MS. (2018). Transcriptome of Xenopus andrei, an octoploid frog, during embryonic development. Data in Brief, Vol. 19, Aug. 2018, 501-505. https://doi.org/10.1016/j.dib.2018.05.017
Parthasarathy R*, Monette CE*, Bracero S*, Saha MS, "Methods for field measurement of antibiotic concentrations: limitations and outlook." FEMS Microbiology Ecology (05 June 2018), https://doi.org/10.1093/femsec/fiy105.
Beal J, Haddock-Angelli T, Baldwin G, Gershater M, Dwijayanti A, Storch M, de Mora K, Lizarazo M, Rettberg R, With the iGEM Interlab Study Contributors (several hundred IGEMers & their mentors – including the W&M team). (2018) Quantification of bacterial fluorescence using independent calibrants. PLOS ONE, June 21, 2018. https://doi.org/10.1371/journal.pone.0199432
Solini GE*, Dong C*, Saha MS. (2017). Embryonic transplantation experiments: Past, present, and future, Trends inDevelopmental Biology, Vol. 10, 13 – 30.
Anders KR, Barekzi N, Best AA, Frederick GD, Mavrodi DV, Vazquez E, SEA- PHAGES, Amoh NY*, Baliraine FN, Buchser WJ, Cast TP, Chamberlain CE, Chung H-M, D’Angelo WA, Farris CT, Fernandez-Martinez M, Fischman HD, Forsyth MH, Fortier AG, Gallo KF, Held GJ, Lomas MA, Maldonado-Vazquez NY, Moonsammy CH, Namboote P, Paudel S**, Polley S-EM, Reyes GM, Rubin MR, Saha MS, Stukey J, Tobias TD, Garlena RA, Stoner TH, Cresawn SG, Jacobs-Sera D, Pope WH, Russell DA, Hatfull GF. 2017. “Genome sequences of mycobacteriophages Amgine, Amohnition, Bella96, Cain, DarthP, Hammy, Krueger, LastHope, Peanam, PhelpsODU, Phrank, SirPhilip, Slimphazie, and Unicorn.” Genome Announc 5:e01202-17. https://doi.org/10.1128/genomeA.01202-17.
Bonilla JA, Isern S, Findley A, Klyczek KK, Michael SF, Saha MS, Buchser WJ, Forsyth MH, Paudel S**, Gissendanner C, Wiedemeier AMD, Alonzo FL, University of Wisconsin–River Falls SEA-PHAGES, Florida Gulf Coast University SEA-PHAGES, University of Louisiana– Monroe SEA-PHAGES, College of William & Mary SEA- PHAGES, Garlena RA, Russell DA, Pope WH, Cresawn SG, Jacobs-Sera D, Hatfull GF. 2017. “Genome sequences of 19 Rhodococcus erythropolis cluster CA phages.” Genome Announc 5:e01201-17. https://doi.org/10.1128/genomeA.01201-17.
An inclusive Research Education Community (iREC): Impact of the SEA-PHAGES program on research outcomes and student learning,” PNAS 2017 114 (51) 13531-13536; published ahead of print December 5, 2017, doi:10.1073/pnas.1718188115. [Endless engagement in HHMI assessment activities resulted in a a crowd-sourced PNAS paper for M. Saha (238 authors)]
Hayes JA, Kottick A, Picardo MCD, Halleran AD*, Smith RD, Smith GD, Saha MS, Del Negro CA. Transcriptome of neonatal pre-Botzinger comlex neurons in Dbx1 reporter mice. Sci Rep. 2017 Aug 17;7(1):8669. doi: 10.1038/s41598-017-09418-4.
Marken JP*, Halleran AD*, Rahman A**, Odorizzi L*., LeFew M*, Golino C*., Kemper P, Saha MS. (2016) A Markovian Entropy Measure for the Analysis of Calcium Activity Time Series. PLOS ONE, doi.org10/1371/journal.pone.0168341.
Beal et al. Reproducibility of Fluorescent Expression from Engineered Biological Constructs in E. coli (2016) [Crowd-sourced science -- many authors including entire W&M iGEM team* and myself], PLOS ONE, 11(3): e0150182. doi:10.1371/journal.pone.0150182
Kaugars KE*, Rivers CI*, Saha MS, Heideman PD. Genetic variation in total number and locations of GnRH neurons identified using in situ hybridization in a wild-source population. J Exp Zool A Ecol Genet Physiol. 2016 Feb;325(2):106-15. doi: 10.1002/jez.2000. Epub 2015 Dec 24. PubMed PMID: 26699837.
Halleran AD*, Clamons S*, Saha MS. (2015) Transcriptomic Characterization of an Infection of Mycobacterium smegmatis by the Cluster A4 Mycobacteriophage Kampy. PLOS ONE, http://dx.doi.org/10.1371/journal.pone.0141100
Welkin H Pope, Charles A Bowman, Daniel A Russell, Deborah Jacobs-Sera, David J Asai, Steven G Cresawn, William R Jaobs Jr, Roger W Hendrix, Jeffrey G Lawrence, Graham F Hatfull, Science Education Alliance Phage Hunters Advancing Genomics and Evolutionary Science, Phage Hunters Integrating Research and Education, Mycobacterial Genetics Course. (2015). "Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity." [2,863 authors] 10.7554/eLife.06416
Huyck RW**, Nagarkar M*, Olsen N*, Clamons SE*, Saha MS. (2015). Methylmercury exposure during early Xenopus laevis development affects cell proliferation and death but not neural progenitor specification. Neurotoxicol Teratol. Jan-Feb;47:102-13. doi: 10.1016/j.ntt.2014.11.010. Epub 2014 Dec 10.PMID: 25496965 [In press].
Halleran AD*, Sehdev M*, Rabe BA*, Huyck RW**, Williams CC*, Saha MS. Characterization of tweety gene (ttyh1-3) expression in Xenopus laevis during embryonic development. (2015). Gene Expr Patterns. Dec 23;17(1):38-44. doi: 10.1016/j.gep.2014.12.002. [Epub ahead of print - In press].
Vasiliu D, Clamons S*, McDonough M*, Rabe B, * Saha MS. 2015. A Regression-Based Differential Expression Detection Algorithm for Microarray Studies with Ultra-Low Sample Size. 04 Mar 2015 | PLOS ONE 10.1371/journal.pone.0118198
Lewis BB*, Miller LE*, Herbst WA*, Saha MS. (2014). The role of voltage-gated calcium channels in neurotransmitter phenotype specification: Coexpression and functional analysis in Xenopus laevis. J Comp Neurol. 2014 Aug 1;522(11):2518-31. doi: 10.1002/cne.23547. Epub 2014 Apr 12.
Murray JR*, Stanciauskas ME*, Aralere TS*, Saha MS. (2014). Dissection and Downstream Analysis of Zebra Finch Embryos at Early Stages of Development, J Vis Exp. 2014 Jun 21;(88). doi: 10.3791/51596. PMID:24999108.
Tuajuanda C. Jordan, Sandra H. Burnett, Susan Carson, Steven M. Caruso, Kari Clase, Randall J. DeJong, John J. Dennehy, Dee R. Denver, David Dunbar, Sarah C. R. Elgin, Ann M. Findley, Chris R. Gissendanner, Urszula P. Golebiewska, Nancy Guild, Grant A. Hartzog, Wendy H. Grillo, Gail P. Hollowell, Lee E. Hughes, Allison Johnson, Rodney A. King, Lynn O. Lewis, Wei Li, Frank Rosenzweig, Michael R. Rubin, Margaret S. Saha, James Sandoz, Christopher D. Shaffer, Barbara Taylor, Louise Temple, Edwin Vazquez, Vassie C. Ware, Lucia P. Barker, Kevin W. Bradley, Deborah Jacobs-Sera, Welkin H. Pope, Daniel A. Russell, Steven G. Cresawn, David Lopatto, Cheryl P. Bailey, Graham F. Hatfull. (2014). A Broadly Implementable Research Course in Phage Discovery and Genomics for First-Year Undergraduate Students. mBIO, (2014) Feb 4;5(1):e01051-13. doi: 10.1128/mBio.01051-13.
Murray JR*, Varian-Ramos CW, Welch ZS*, Saha MS. (2013). Embryological staging of the Zebra Finch, Taeniopygia guttata, J. Morphology. 274 (10): 1090-1110.
McDonough, M. J. *, Allen, C. E. *, Ng-Sui-Hing, N. K. L. A. *, Rabe, B. A. *, Lewis, B. B. *, Saha, M. S. (2012). Dissection, Culture, and Analysis of Xenopus laevis Embryonic Retinal Tissue. J. Vis. Exp. [JoVE], (70), e4377, doi:10.3791/4377.
Kight CR, Saha MS, Swaddle JP. (2012). Anthropogenic noise is associated with reductions in the productivity
of breeding Eastern Bluebirds (Sialis sialis). Ecol Appl. Oct;22(7):1989-96.
E. MacMurray** and M.S. Saha, (2012). "The Role of Voltage Gated Calcium Channels in the Developing
Vertebrate Retina," in Calcium Channels: Properties, Functions, and Regulation, Nova Science Publishers, pp. 87-108.
Pope WH, Ferreira CM, Jacobs-Sera D, Benjamin RC, Davis AJ, DeJong RJ, Elgin SC, Guilfoile FR, Forsyth MH, Harris AD, Harvey SE*, Hughes LE, Hynes PM, Jackson AS*, Jalal MD, MacMurray EA**, Manley CM, McDonough MJ*, Mosier JL, Osterbann LJ, Rabinowitz HS, Rhyan CN, Russell DA, Saha MS, Shaffer CD, Simon SE, Sims EF, Tovar IG, Weisser EG, Wertz JT, Weston-Hafer KA, Williamson KE, Zhang B, Cresawn SG, Jain P, Piuri M, Jacobs WR Jr, Hendrix RW, Hatfull GF. (2011). Cluster K mycobacteriphages: insights into the evolutionary origins of mycobacteriophage TM4. PLoS One. 6(10):e26750. Epub 2011 Oct 28.
Kaeser, G. *, Rabe, B. *, and Saha, M.S. (2011). Cloning and characterization of GABAAα and GABAB subunits in Xenopus laevis during development, Developmental Dynamics Apr;240(4):862-73.
Pope, W., Jacobs-Sera, D., Russell, D., …..(followed by 163 authors listed alphabetically including Mark H. Forsyth, Kobie C. Gordon*, Samuel E. Harvey*, Arrykka S. Jackson*, Molly J. McDonough*, Margaret S. Saha, Jillian M. Walton*, Hilary M. Whelan*, Kurt E. Williamson) ….. Roger W. Hendrix, Graham F. Hatfull (corresponding author). (2011). Expanding the diversity of mycobacteriophages: Insights into genome architecture and evolution, PLoS One, PLoS One. 2011 Jan 27;6(1):e16329.. This is the first research article from the Phage Lab, Cohort 1.
Chalphin A. V. *, Saha M. S., (2010). The specification of glycinergic neurons and the role of glycinergic transmission in development. Front Mol Neurosci. Apr 22;3: Article 11, 1-13.
Lewis, B.#, * Wester, M.#, * Miller, L. *, Nagarkar, M. *, Johnson, M. *, Saha, M. S. (2009). Cloning and characterization of voltage-gated calcium channel alpha1 subunits in Xenopus laevis during development. Developmental Dynamics 238 (11):2891-2902. #=co-first authors.
J. Qian**, E. L. Bradley, S. Majewski, V. Popov, M. S. Saha, M. F. Smith, A. G. Weisenberger, and R. E. Welsh. (2008). "A small-animal imaging system capable of multipinhole circular/helical SPECT and parallel-hole SPECT." Nuclear Instruments and Methods in Physics Research Section A, 594, 102-110.
Wester, M.# *, Teasley, D.C#*., Byers, S.L. *, Saha, M.S. Expression patterns of glycine transporters (xGlyT1, GlyT2, and xVIAAT) in Xenopus laevis during early development. Mechanisms of Development, Gene Expression Patterns 2008 Apr;8(4):261-70. #=co-first authors.
Hammond, W. *, Bradley, E., Welsh, R., Qian, J. **, Weisenerger, A. **, Smith, M., Majewski, S., Saha, M.S., (2007). A Gamma Camera Re-evaluation of Potassium Iodide Blocking Efficiency in Mice, Health Physics, Apr. 92(4):396-406.
Crowder E.A. *, Saha M.S., Pace R.W., Zhang H., Prestwich G.D., Del Negro C.A. (2007). Phosphatidylinositol 4,5-bisphosphate regulates inspiratory burst activity in the neonatal mouse preBotzinger complex. J Physiol. 2007 Aug 1;582 (Pt 3):1047-58.
Sipe, C.W. **, Dondeti, V.R*., Saha, M.S., (2007). In silico Gene Selection for Custom Oligonucleotide Microarray Design, Methods in Molecular Biology, Vol. 282, Microarrays, 2nd ed. Vol. 2, J. Rampal, ed. Humana Press, Totowa, N.J., pp. 417-428.Sipe, C.W. and Saha, M.S., (2007). The use of Microarray Technology in Non-Mammalian Vertebrate Species,” Methods in Molecular Biology, Vol. 282, Microarrays, 2nd ed. Vol. 2, J. Rampal, ed. Humana Press, Totowa, N.J., pp. 1-16.
Li, M.* *; Sipe, C. **, Hoke, K. *, August, L. **; Wright, M. * Saha, M. (2006). The Role of Early Lineage in GABAergic and Glutamatergic Cell Fate Determination in Xenopus laevis, Journal of Comparative Neurology, 495: 645-657.
Bradley, E., Cella, J. *, Majewski, S., Popov, V., Qian, J., Saha, M.S., Smith, M., Weisenberger, A.G., and Welsh, R.E. (2006) “A ‘Mouse-Sized’ Gamma Camera for Biological Imaging”, IEEE, Trans. Nucl. Sci., .53 (1): 59-65.
Dondeti, V.R*., Sipe, C.W. **, and Saha, M.S. (2004) A Gene Selection Strategy for Custom Microarray Design, BioTechniques, 37(5):768-70, 772, 774-6.
Saha, M.S., Cox, E.A* and Sipe, C.W* *. (2004). Mechanisms Regulating the Origins of the Vertebrate Vascular System. Journal of Cellular Biochemistry, 93, 46-56.
Sipe, C**., Gruber, E*., and Saha, M.S. (2004). A Short Upstream Region Drives Dynamic Expression of Hypoxia-inducible Factor 1[alpha] During Xenopus Development.Developmental Dynamics, 230, 229-238.
Gleason, K.K. **, Dondeti, V.R*., Hsia, H.L*., Cochran, E.R. *, Gumulak-Smith, J., and Saha, M.S. (2003). The vesicular glutamate transporter 1 (xVGlut1) is expressed in discrete regions of the developing Xenopus laevis nervous system. Gene Expression Patterns: A section of Mechanisms of Development, 3 (4), 503-507.
Saha, M.S., Bradley, E.L., Brewer, P., Gleason, K.K. **, Kross, B., Majewski, S., Popov, V., Ranck, A. *, Smith, K. *, Weisenberger, A.G. **, Wojcik, R., and Welsh, R.E. (2003). Incorporation of a fluoroscopic X-Ray modality in a small animal imaging system,” IEEE Transactions on Nuclear Science 50 (3), 333-338.
Weisenberger, A.G. **, Wojcik, R., Bradley, E.L., Brewer, P. *, Majewski, S., Qian, J.*, Ranck, A. *, Saha, M.S., Smith, K*., Smith, M.F., Welsh, R.E. (2003). SPECT-CT system for small animal imaging, IEEE ransactions on Nuclear Science 50 (1), 74-79.
Whitford, K. L. *, Oakes, J.A., Scholnick, J., and Saha M.S. (2000). Tissue-specific developmental expression of OAX, a Xenopus repetitive element. Mechanisms of Development 94 (1-2), 209-212.
Mills, K.R. *, Kruep, D. *, and Saha, M.S. (1999). Elucidating the origins of the vascular system: A fate map of vascular endothelial and red blood cell lineages in Xenopus laevis,Developmental Biology 209 (2), 352-368.
Weisenberger, A.G.* *, Kross, B., Majewski, S., Wojcik, R., Bradley, E., and Saha, M.S. (1998). Design features and performance of a CsI(Na) array based gamma camera for small animal gene research. IEEE Transactions on Nuclear Science, 45 (6), 3053-3058.
Weisenberger, A.G**., Bradley, E., Majewski, S., and Saha, M.S. (1998). Development of a novel radiation imaging detector system for in vivo gene imaging in small animal studies, IEEE Transactions on Nuclear Science 45 (3), 1743-1749.
Scholnick, J., Oakes, J., Sinor, C.* *, Outten, W*. and Saha, M. (1997). Differential expression of ribosomal protein gene XlrpS1c. Biochimica et Biophysica Acta 1354 (1), 72-82.
Saha, M.S., Miles, R.R**., and Grainger, R.M. (1997). Dorsal-ventral patterning during neural induction in Xenopus: assessment of spinal cord regionalization with xHB9, a marker for the motor neuron region. Developmental Biology 187 (2), 209-223.
Weisenberger, A.G.*, Majewski, S., Saha, M.S., and Bradley, E. (1997). Coincident imaging of I-125 for in vivo gene imaging in small animals. Nuclear Instruments and Methods in Physics Research, A 392, 299-303.
Drysdale, T.A., Patterson, K.D., Saha, M., and Krieg, P.A. (1997). Retinoic acid can block differentiation of the myocardium after heart specification. Developmental Biology 188 (2), 205-215.
Cleaver, O**., Tonissen, K.F., Saha, M.S., and Krieg, P. A. (1997). Neovascularization of the Xenopus embryo. Developmental Dynamics 210 (1), 66-77.
Saha, M.S. (1997). Illustrations of inductive phenomena in Textbook of Tissue Engineering, pp. 67-78, ed. R. P. Lanza. R.G. Landes Company, Publisher.
Smolich, B.D., Tarkington, S.K., Saha, M.S. and Grainger, R.M. (1994). Xenopus gamma-crystallin gene expression: evidence that the gamma crystallin gene family is transcribed in lens and non-lens tissues. Cellular and Molecular Biology 14 (2), 1355-63.
Saha, M.S., Michel, R.B., Gulding, K.M., and Grainger, R.M. (1993). A Xenopus homeobox gene defines dorsal-ventral domains in the developing brain. Development 118 (1), 193-202.
Smolich, B.D., Tarkington, S.T., Saha, M.S., Stathakis, D.G., and Grainger, R.M. (1993).Characterization of Xenopus laevis gamma-crystallin-encoding genes. Gene 128 (2),189-195.
Saha, M.S. and Grainger, R.M. (1993). Opsin expression precedes photoreceptor differentiation in Xenopus. Molecular Brain Research 17 (3-4), 307-318.
Gonzalez-Fernandez, F., Kittredge, K.L., Rayborn, M.E., Hollyfield, J.G., Landers,R.A., Saha, M., and Grainger, R.M. (1993). IRBP, a major 124 kDa glycoprotein in the interphotoreceptor matrix of Xenopus. Characterization, molecular cloning, and biosynthesis. J. Cell Science 105, 7-21.
Grainger, R.M., Henry, J.J., Saha, M.S., and Servetnick, M. (1992). Recent progress on the mechanisms of embryonic lens formation. Eye 6, 117-122.
Saha, M.S. and Grainger, R.M. (1992). A labile period in the determination of the anterior-posterior axis during early neural development in Xenopus. Neuron 8 (6) 1003-1014.
Saha, M.S., Servetnick, M., and Grainger, R.M. (1992). Vertebrate eye development. Current Opinion in Genetics and Development. 2 (4), 582-588.
Saha, M.S. (1991). Spemann seen through a lens, in A Conceptual History of Induction. Ed. S. Gilbert. New York, Plenum, pp. 91-108.
Saha, M.S., Spann, C.L. and Grainger, R.M.. (1989). Embryonic lens induction: more than meets the optic vesicle. Cell Differentiation and Development 28 (3), 153-171.