Sachidananda Mishra
Satellite Oceanographer
National Oceanic and Atmospheric Administration (NOAA)
Sachi Mishra works as Satellite Oceanographer at the National Centers for Coastal Ocean Science (NCCOS), NOAA. His research interest lies in the aquatic remote sensing domain. He uses satellite remote sensing data, geospatial technologies, and physics-driven machine learning models to detect, monitor, and forecast cyanobacterial harmful algal blooms (cyanoHABs) in lakes, estuaries, and coastal oceans and understand their driving factors. His prior research focused on biophysical parameter estimation from high-resolution airborne hyperspectral data using machine learning and developing semi/quasi-analytical algorithms to quantify water quality parameters such as chlorophyll-a, phycocyanin, dissolved organic matter, and suspended sediment concentration from ocean color measurements in optically-complex waters.
Education
Ph.D., Earth and Atmospheric Science
Mississippi State University, MS, USA
M.S., Ocean Engineering
Indian Institute of Technology Madras, Chennai, India
Research Interests
Remote sensing
Ocean color remote sensing
Harmful algal blooms (HABs)
Hyperspectral remote sensing
UAVs
Machine learning
Physics-driven AI-ML applications to model and predict HABs
Explainable AI
Professional Experience
Associate Scientist: Dow AgroSciences, March 2015 - December 2016
Senior Analyst (Remote Sensing): Dow AgroSciences, Oct 2012- March 2015
Research Assistant, Geo-systems Research Institute, Mississippi State University, Summer 2011-Summer 2012
Research Assistant, Geo-systems Research Institute, Mississippi State University, Summer 2010
Publications (Google Scholar) (Research Gate)
Peer-Reviewed Journal Articles
Mishra, S., Stumpf, R.P., Meredith, A. (2023). Constructing a consistent and continuous cyanobacteria bloom monitoring product from multi-mission ocean color instruments, Remote Sensing (in press).
Mishra, S., Stumpf, R.P., Schaeffer, B.A. and Werdell, P.J., 2023. Recent changes in cyanobacteria algal bloom magnitude in large lakes across the contiguous United States. Science of The Total Environment, p.165253.
Lehmann, M.K., Gurlin, D., Pahlevan, N., Alikas, K., Anstee, J., Balasubramanian, S.V., Barbosa, C.C.F., Binding, C., Bracher, A., Bresciani, M., Burtner, A., Cao, Z., Dekker, A.G., Drayson, N., Errera, R.M., Fernandez, V., Fichot, C.G., Gege, P., Giardino, C., Gitelson, A.A., Greb, S.R., Henderson, H., Higa, H., Irani Rahaghi, A., Jamet, C., Jiang, D., Kangro, K., Kudela, R., Li, L., Ligi, M., Loisel, H., Lohrenz, S., Ma, R., Maciel, D.A., Malthus, T.J., Matsushita, B., Minaudo, C., Mishra, D.R., Mishra, S., Moore, T., Moses, W.J., Nguyễn, H., Novo, E.M.L.M., Novoa, S., Odermatt, D., O'Donnell, D.M., Olmanson, L.G., Ondrusek, M., Oppelt, N., Pereira Filho, W., Plattner, S., Ruiz Verdú, A., Salem, S.I., Schalles, J.F., Simis, S.G.H., Siswanto, E., Smith, B., Somlai-Schweiger, I., Soppa, M.A., Spyrakos, E., van der Woerd, H.J., Vander Woude, A., Vantrepotte, V., Wernand, M.R., Werther, M., Yue, L., Jordan, T., Kravitz, J.A., Kristoffersen, A.S., Matthews, M., Tessin, E., Vandermeulen, R.A., Ficek, D., Di Vittorio, C., & Young, K. Scientific Data 10 (1), 100. https://doi.org/10.1038/s41597-023-01973-y, 2023, (Impact Factor: 8.5)
Wynne T.T., Tomlinson M.C., Briggs T.O., Mishra S, Meredith A, Vogel R.L., Stumpf RP. Evaluating the Efficacy of Five Chlorophyll-a Algorithms in Chesapeake Bay (USA) for Operational Monitoring and Assessment. Journal of Marine Science and Engineering. 2022 Aug 12;10(8):1104.
Whitman, P., Schaeffer, B., Salls, W., Coffer, M., Mishra, S., Seegers, B., Loftin, K., Stumpf, R. and Werdell, P.J. (2022). A validation of satellite derived cyanobacteria detections with state reported events and recreation advisories across US lakes. Harmful Algae, 115, p.102191. (Impact Factor: 4.27)
Wynne, T.T., Mishra, S., Meredith, A., Litaker, R.W., and Stumpf, R.P., 2021. Intercalibration of MERIS, MODIS, and OLCI Satellite Imagers for Construction of Past, Present, and Future Cyanobacterial Biomass Time Series. Remote Sensing, 13(12), p.2305. (Impact Factor:4.5)
Mishra, S., Stumpf, R.P., Schaeffer, B.A., Schaeffer, B., Werdell, J., Loftin and Meredith, A. (2021). Evaluation of satellite-based cyanobacteria bloom detection algorithm using field-measured Microcystin data. Science of The Total Environment, p.145462. (Impact Factor: 6.55)
Mishra, S., Stumpf, R.P., Schaeffer, B.A., Schaeffer, B., Werdell, J., Loftin and Meredith, A. (2019). Measurement of Cyanobacterial Bloom Magnitude using Satellite Remote Sensing. Scientific Reports, 9, 18310, doi:10.1038/s41598-019-54453-y (Impact Factor: 4.525)
Chaffin, J.D., Mishra, S., Kane, D.D., Bade, D.L., Stanislawczyk, K., Fox, E.L., Jones, K.W., Parker, E.M., Slodysko, K.N. (2019). Cyanobacterial blooms in the central basin of Lake Erie: Potentials for cyanotoxins and environmental drivers. Journal of Great Lakes Research, 45(2)-277-289 (Impact Factor: 2.35)
Mishra, S., Stumpf, R.P., Meredith, A. (2019). Evaluation of RapidEye Data for Mapping Algal Blooms in Inland Waters, International Journal of Remote Sensing, DOI: 10.1080/01431161.2018.1533657 (accepted, Impact Factor: 1.78)
Astuti, I. S., Mishra, D. R., Mishra, S., and Schaeffer, B. (2018). Spatio-temporal dynamics of inherent optical properties in oligotrophic northern Gulf of Mexico estuaries, Continental Shelf Research, 166: 92-107. (Impact Factor: 2.134)
Mishra, D.R.; D’Sa, E.J.; Mishra, S.(2016). Preface: Remote Sensing of Water Resources. Remote Sensing., 8, 115. (Impact Factor: 4.118)
Mishra, S. and Mishra, D.R. (2014). A novel remote sensing algorithm to quantify phycocyanin in cyanobacterial algal blooms, Environmental Research Letters, 9 (11), DOI:10.1088/1748-9326/9/11/114003 (Impact Factor: 4.01)
Mishra, S., Mishra, D.R., and Lee, Z.P. (2014). Bio-optical inversion in highly turbid and cyanobacteria dominated waters, IEEE Transactions on Geoscience and Remote Sensing, Issue 99:1-7, DOI-10.1109/TGRS.2013.2240462. (Impact Factor: 3.467)
Ogashawara, I., Mishra, D. R., Mishra, S., Curtarelli, M. P., Stech, J. L. (2013). A performance review of reflectance-based algorithms for predicting phycocyanin concentrations in inland waters, Remote Sensing, 5(10), 4774-4798. (Impact Factor: 4.5)
Mishra, S., Mishra, D.R., Lee, Z.P., and Tucker, C. G. (2013). Quantifying cyanobacteria phycocyanin concentration in turbid productive waters: A quasi-analytical approach, Remote Sensing of Environment, 133: 141-151. (Impact Factor: 6.393)
Cho, H. J., Mishra, S., and Mishra, D. (2013). A graphical user interface for benthic mapping, ACEEE International Journal of Information Technology, 3(1): 23-27
Mishra S. and Mishra, D. R. (2012). Normalized Difference Chlorophyll Index: A novel model for remote estimation of chlorophyll-a concentration in turbid productive waters, Remote Sensing of Environment, 117: 394-406. (Impact Factor: 6.393)
Mishra, D. R., H. J. Cho, S. Ghosh, C. Downs, A. Fox, P. B. T. Merani, P. Kirui, N. Jackson, and Mishra, S. (2012). Post-spill state of the marsh: impact of the Gulf of Mexico oil spill on the health and productivity of Louisiana salt marshes, Remote Sensing of Environment, 118: 176-185. (Impact Factor: 6.393)
Mishra, D. R. and S. Mishra (2010). Plume and bloom: Effect of Mississippi river diversion opening on the spatiotemporal variability of water quality parameters in Lake Pontchartrain. Geocarto International, 25 (7): 555-568. (Impact Factor: 0.575)
Mishra, S., D. R. Mishra, and Schluchter, W. (2009). A novel model for predicting phycocyanin concentrations in cyanobacteria: A proximal hyperspectral remote sensing approach. Remote Sensing, 1: 758-775. (Impact Factor: 4.5)
Book Chapter
Mishra D. R., Astuti, I., and Mishra, S., (2019). Coastal water algorithms (chlorophyll-a). In: M. Madden and S. Bernardes (eds.) Manual of Remote Sensing, American Society for Photogrammetry and Remote Sensing, 4th Edition, Bethesda, Maryland.
Technical Reports
Mishra, D., Das, P., and Mishra, S. (2009). Final report: Measuring 2005 Land Loss in the Pontchartrain Basin Using High-Resolution Color Infrared Aerial Photography at a Scale of 1/12,000: Hurricane Impact. NOAA, 25 pp.
Arellano, A., Briggs, N., Cao, F., Chase, A., Chen, H., Dave, A., Goyens, C., Henderikx-Freitas, F., Kearney, C., Kheireddine, M., Mishra, S., Neeley, A., Omand, M., Powers, L., Reisinger, A., Rivero, S., Russell, B., Seegers, B., Vandermeulen, R., and W., Zhu (2011). Portfolio of Measurement, Processing, and Analysis Techniques for Optical Oceanography Data, A report created by the students of: “Calibration and Validation for Ocean Color Remote Sensing,” University of Maine Darling Marine Center, 11-29 July 2011. Funding provided by NASA, 161 pp. (In alphabetic order)
Conference Proceedings
Mishra, D.R., Mishra, S., and Narumalani, S. (2014) Hyperspectral remote sensing of Cyanobacteria: successes and challenges ", Proc. SPIE 9263, Multispectral, Hyperspectral, and Ultraspectral Remote Sensing Technology, Techniques, and Applications V, 92630J (November 18, 2014); DOI:10.1117/12.2069320
Contributed Presentations and Posters
Mishra, S., Stumpf, R.P., Schaeffer, B., Werdell, P.J., Meredith1, A., Two decades of satellite observation show a recent widespread decrease in cyanobacteria bloom magnitude in lakes across the contiguous United States, oral presentation at the 11th U.S. Symposium on Harmful Algae, Albany, New York, USA, Oct. 23rd -28th, 2022.
Schaeffer, B., Wolfe, K., Whitman, P., Werdell, J., Urquhart, E., Tomlinson, M., Stumpf, R.P., Smith, D., Seegers, B., Salls, W., Parmar, R., Papenfus, M., Mishra, S., Meredith, A., Loftin, K., Keith, D., Johnston, J., Iiames, J., Hilborn, E., Darling, J., Conmy, R., Coffer, M., Bailey, S. Highlights of the cyanobacteria assessment network: validation, application, and reverberation, Poster presentation at the Ocean Optics XXV, Quy Nhon, Binh Dinh, Vietnam, Oct. 2nd – 7th, 2022.
Pokrzywinski, K., Mishra, S., Fernando, B., Grasso, C, and Reif, M., Evaluation of the stability of hyperspectral signatures in microcystis aeruginosa and dolichospermum sp. Under nutrient stress, poster presentation at the 12th International Conference on Toxic Cyanobacteria, Toledo, OH, USA, May 22nd – 27th, 2022.
Tomlinson, M.C., Wynne, T., Briggs, T.O., Mishra, S., Vogel, R.L. and Stumpf, R.P., An evaluation of an improved coastal chlorophyll-a algorithm for Chesapeake Bay to support operational monitoring and assessment, oral presentation at Chesapeake Community Research Symposium 2022, Annapolis, MD, USA, Jun 6th – 8th, 2022.
Mishra, S., Stumpf, R. P., Meredith, A. Schaeffer, B., Werdell, J., Seegers, B., Loftin, K., Two Decades of Cyanobacteria Bloom Assessment and Change Detection in Lakes of The Contiguous United States using Satellite Observations, poster presentation in the 19th International conference on Harmful Algae, La Paz, Mexico, 10th – 15th Oct, 2021.
Mishra, S., Stumpf, R. P., Meredith, A. Schaeffer, B., Werdell, J., Loftin, K, Urquhart, E. and Seegars, B., Assessing cyanobacteria blooms from space, poster presentation in the Ocean Sciences Meeting, San Diego, CA, USA, 16th – 21st Feb 2020
Wynne, T., Stumpf, R., Mishra, S., and Meredith, A., Inter-satellite calibration for decadal observations and operational forecasting of cyanobacterial blooms, poster presentation in the Ocean Sciences Meeting, San Diego, CA, USA, 16th – 21st Feb 2020
Mishra, S., Stumpf, R. P., Meredith, A. Schaeffer, B., Werdell, J., Seegars, B., and Loftin, K., Cyanobacteria Bloom Assessment in Lakes of the Contiguous United States Using Satellite Observations, oral presentation in the 39th International symposium of North America Lake Management Society (NALMS), Burlington, VT, USA, 11th-15th Nov 2019
Stumpf, R.P., Wynne, T., Meredith, A., Mishra, S., Merging the future with the present and past for detecting and evaluating cyanobacterial blooms from satellites, oral presentation at the International Association for Great Lakes Research Annual Conference, Brockport, NY, USA, 10th-14th Jun 2019.
Mishra, S., Stumpf, R.P., Wynne, T. Algal Bloom Severity Index for Lake Erie Sub-basins, oral presentation at the International Association for Great Lakes Research Annual Conference, Toronto, Canada, 18th-22nd June 2018.
Wynne, T., Stumpf, R.P., Meredith, A., Mishra, S. Comparing the Interannual Variability of the Annual Cyanobacteria Bloom in Western Lake Erie with Saginaw Bay, poster presentation at the International Association for Great Lakes Research Annual Conference, Toronto, Canada, 18th-22nd Jun 2018.
Chaffin, J., Davis, T. W., Smith, D., Dick, G., Baer, M., Mishra, S. Microcystins and saxitoxins in the western and central basins of Lake Erie, Society for Freshwater Science Annual Meeting, Detroit, MI, USA, May 20th-24th, 2018
Mishra, S., Stumpf, R. P., Wynne, T. T., Meredith, A. W., and Tomlinson, M. C., Estimating Algal Bloom Severity in East Florida Inland Lakes From 10 Years Of MERIS Observation, oral presentation (speed talk) in the 9th U.S. HAB Conference, Baltimore, MD, USA, 11th-17th Nov, 2017
Wynne, T. T., Stumpf, R. P., Wayne, L., Mishra, S., Davis, T. W., De Statio, B., and Hood, R.R., Estimating Algal Bloom Severity in East Florida Inland Lakes From 10 Years Of MERIS Observation, poster presentation at the 9th U.S. HAB Conference, Baltimore, MD, USA, 11th-17th Nov 2017
Wynne, T. T., Stumpf, R. P., Wayne, L., Mishra, S., Davis, T. W., De Statio, B., and Hood, R.R., Discrimination Of Cyanobacteria From Mixed Bloom Assemblages In Green Bay, Wisconsin, poster presentation at the 9th U.S. HAB Conference, Baltimore, MD, USA, 11th-17th Nov 2017
Mishra, S., Stumpf, R. P., Bridgeman, T. B., Davis, T. W., Johengen, T. H., Wynne, T. T., Meredith, A. W., and Tomlinson, M. C., Relationships Between Field and Satellite Estimates of Cyanobacterial Bloom Severity in Western Lake, oral presentation at the International Association for Great Lakes Research Annual Conference, Detroit, MI, USA, 15th-19th May 2017.
Wynne, T. T., Stumpf, R. P., Meredith, A. W., Davis, T. W., Mishra, S., and Tomlinson, M.C., Variability in Cyanobacterial Bloom Biomass in Saginaw Bay, poster presentation at the International Association for Great Lakes Research Annual Conference, Detroit, MI, USA, 15th-19th May 2017.
Mishra, S. and D. Mishra, Recent advances in remote sensing of cyanobacteria, oral presentation at the American Association of Geographers Annual Meeting, Chicago, IL, USA, 21st -25th Apr 2015.
Mishra, D.R., Mishra, S., and Narumalani, S. (2014). Hyperspectral remote sensing of Cyanobacteria: successes and challenges, oral presentation at the SPIE Asia Pacific Remote Sensing Conference, Beijing, China, 13th -16th October 2014.
Gali, R. K., Poletika, N. N., Cryer, S. A., Mishra, S. (2013). PRZM-Hybrid and VFSMOD modeling of chlorpyrifos transport in small agricultural watersheds in Minnesota, USA, 246th American Chemical Society National Meeting and Exposition, Indianapolis, IN, 08th-12th September 2013.
Mishra, S. and Mishra, D. Quantification of Cyanobacterial Phycocyanin Concentration in Turbid Productive Waters through Bio-optical Inversion, oral presentation at the American Association of Geographers Annual Meeting, Los Angeles, CA, 09th-13th Apr 2013.
Mishra, S. “A Quasi-Analytical Algorithm to Quantify Phycocyanin Concentration in Cyanobacterial Algal Blooms,” oral presentation at the GSA Research Symposium, Mississippi State University, 14th Apr. 2012.
Mishra, S., Mishra, D. R., “Bio-optical inversion model for retrieving phycocyanin concentration in cyanobacteria dominated waters” poster presentation at the Ocean Science Meeting, Salt Lake City, UT, USA, 19-24 Feb 2012.
Rivero-Calle, S., Goyens, C., Seegers, B., Freitas, F. H., Cao, F., Mishra, S., Vandermeulen, R. “Closure in calibration and validation of ocean color remote-sensing: ocean optics summer course 2011” poster presentation at the Ocean Science Meeting, Salt Lake City, UT, USA, 19-24 Feb 2012.
Mishra, S., Mishra, D.R., Tucker, C. “Quantifying Phycocyanin Concentration in Cyanobacterial Algal Blooms from Remote Sensing Reflectance-A Quasi Analytical Approach” poster presentation at the AGU Fall Meeting, San Francisco, CA, USA, 04-09 Dec 2011.
Mishra, S., Mishra, D.R., Tucker, C., and Ross, M.K. “A quasi-analytical algorithm to quantify phycocyanin concentration in cyanobacterial algal blooms, Oral presentation at the Northern Gulf Institute Annual Conference, Mobile, AL, 17-19 May 2011.
Mishra S. “A Qusai-Analytical Algorithm to Quantify Phycocyanin Concentration in Turbid Productive Waters,” Oral Presentation at the American Association of Geographers Annual Meeting, Seattle, WA, 12-16 April 2011. (Outstanding Student Honors Paper Award)
Mishra, S. “A novel spectral band ratio model for predicting phycocyanin concentrations in cyanobacteria: An experimental study,” poster presentation at the Northern Gulf Institute Annual Conference, Mobile, AL, 18-20 May 2010.
Mishra S., and Mishra, D. R. “A Novel Normalized Band Difference Index for mapping Chlorophyll-a Concentrations in Turbid Productive Waters,” Oral Presentation at the American Association of Geographers Annual Meeting, Washington, DC. 14-18 Apr 2010. (Outstanding Student Honors Paper Award)
Mishra, S., Mishra, D. R., and Schluchter, W. “Hyperspectral Remote Sensing Techniques in Predicting Phycocyanin Concentrations in Cyanobacteria: A Comprehensive Study,” poster presentation at the AGU Fall Meeting, San Francisco, CA, USA, 14-18 Dec 2009.
Mishra, S. “A novel spectral band ratio model to predict phycocyanin in cyanobacteria,” oral presentation at the Spring Graduate Research Symposium, Mississippi State University, Nov. 2009. (Best Oral Presentation Award in Physical Sciences Category)
Mishra, S., and Mishra, D. R. “Effect of Bonnet Carrie Spillway opening on water quality parameters in the Lake Pontchartrain,” Oral presentation at the Graduate Student Symposium organized by Marine and Estuarine Student association, Mobile, AL., April 2009.
Mishra, S., and Mishra, D. R. “Effect of the opening of Mississippi River diversions on the spatiotemporal variability of water quality in the Lake Pontchartrain,” poster presentation at the AAG Annual Meeting, Las Vegas, NV, 22-27 Mar 2009.
Mishra, S., and Mishra, D. R. “Effect of Bonnet-Carrie Spillway opening on spatiotemporal variability of water quality parameters in the Lake Pontchartrain,” poster presentation at the 9th Biennial Basics of the Basin Symposium, New Orleans, November 2008.
Awards and Honors
Outstanding Contribution in Reviewing, Elsevier, Amsterdam, The Netherlands, 2018
Achievement in Crop Genetics and Technologies (ACGT) Award, Dow AgroSciences, 2015
Excellence Award, GTU, Mississippi State University, 2012
NASA scholarship to attend Ocean Optics Summer Training2011‘Calibration and Validation for Ocean Color Remote Sensing’, at Darling Marine Center, jointly sponsored by NASA and University of Maine, 2011
Outstanding student honors paper award, Remote Sensing Specialty Group, Association of American Geographers Annual Meeting, 2011
Outstanding student honors paper award, Remote Sensing Specialty Group, Association of American Geographers Annual Meeting, 2010
Best oral presentation award in physical sciences, Graduate Research Symposium, Mississippi State University, Mississippi State, 2009
New Orleans Geological Society (NOGS) Graduate Scholarship, NOGS, 2008
Crescent City Doctoral Scholarship, University of New Orleans, LA, 2008-2009
Graduate Level Dean's-III Scholarship, University of New Orleans, LA, 2007- 2008
MHRD Graduate Scholarship from Govt. of India, at IIT Madras, India, 2002-2005
Post Graduate. Merit Scholarship from State Government, 2000-2002
National Scholarship for securing highest mark in the University, 2000-2002
University 1st Rank in B.Sc. (Honors) examination, Berhampur University, Odisha, India, 2000
Professional Development
ESRI Users' Conference-2014, San Diego, CA
SMS 598 (Section 001): Ocean Optics summer 2011, an intensive three-week, cross-disciplinary, graduate-level course on 'Calibration and validation for ocean color remote sensing' at the University of Maine's Darling Marine Center from 11- 29 July 2011
NASA Ocean Color Research Team Meeting, New Orleans, May 11-13, 2010
Academic and Professional Affiliations
Sigma XI- The Scientific Research Honor Society
Gamma Theta Upsilon
Sigma Gamma Epsilon
American Geophysical Union
Geological Society of America
SPIE-The International Society for Optics and Photonics
Services
Guest Editor for the special issue on "Water Quality Remote Sensing" in the journal Remote Sensing (ISSN 2072-4292)
Reviewer for the journals:
Nature
Remote Sensing of Environment
Remote Sensing
Environmental Science & Technology
IEEE Transactions on Geosciences and Remote Sensing
Science of the Total Environment
PlosONE
Ecological Informatics
Environmental Pollution
Sensor
Limnology and Oceanography-Methods
International Journal of Remote Sensing
Applied Optics
Optics Express
GIScience and Remote Sensing
Oceanologia
Computational and Structural Biotechnology Journal
Journal of Applied Meteorology and Climatology
Photogrammetric Engineering and Remote Sensing
Continental Shelf Research
Environmental Processes
Journal of Applied Meteorology and Climatology
International Journal of Applied Earth Observation and Geoinformation
Journal of Great Lakes Research
Frontiers in Marine Science
Ecological Indicators
Reviewer, NOAA Seagrant Program
Reviewer, Hollings and EPP/MSI Undergraduate Scholarship Programs, National Oceanic and Atmospheric Administration (NOAA), Silver Spring, MD. USA
Invited to instruct a technical session on Scientific computing and Artificial Intelligence to high school students on NOAA Kids Day-2018
Judge for two talks and two poster presentations by students at International Association for Great Lakes Research Annual Conference (IAGLR), May 15-19, 2017, Detroit, MI, USA
Interviewee for high school students (13 year+) at NOAA Kids Day-2017, Organized by National Oceanic and Atmospheric Administration, Silver Spring, MD, USA.
Member of the organizing committee, GSS-11 Symposium, GTU-Mu Eta, Mississippi State University, Nov 11, 2011.
Judge, state-level science and engineering fair-2011, Mississippi, Mississippi State University, March 29, 2011
President, GTU-Mu Eta Chapter, Mississippi State University (March 2011-July 2012)