Invited Lectures

INVITED LECTURES (Reverse Chronological): <- Click here for details

113) Gene Atlas of Type 2 Diabetes associated comorbidities. International Conference on " Innovations and Translational Dimensions: Food, Health and Environmental Biotechnology” [Biosangam-2018] during March 09 - 11, 2018

112) Text mining of biomedical literature in R and its applications. 24/3/2018. BT2 - Bioinformatics Training for Trainers, 20th to 24th March, 2018, CSIR-IMTECH, Chandigarh

111) Computer representation of molecules and searching libraries using ChemmineR. Bioinformatics Seminar-cum-Hands-on Training 2017 on “R Language and Drug Development” October 30-31, 2017 at BIF, Jamia Hamdard.

110) Integration of Text Data Mining and Genomic data Analytics : A case application for Type 2 Diabetes associated complications, 27th June, 2017 Bioinformatics workshop Supercomputing Facility for Bioinformatics & Computational Biology,3rd floor, Synergy Building (above Staff Canteen),Indian Institute of Technology Delhi,Hauz Khas, New Delhi - 110016, India.

109) Gene atlas of T2D associated Complications. Non coding RNA and Modern Biology, 18th March, 2017, JNU convention Centre, New Delhi

108) The DapA target of M. tuberculosis. Emerging Trends in Biotechnology & Drug Discovery, 10th February, 2017, CSIR-Institute of Genomics & Integrative Biology, Mall Road, Delhi University North Campus, Delhi-110007

107) Text mining of biomedical texts from PubMed using PubMed.mineR. Bioinformatics Centre, Savitribai Phule Pune University, Workshop on “Algorithms in Bioinformatics” January 9-12, 2017

106) Delivered a talk and chaired a session “T2DiACoD:A Gene Atlas of Type 2 Diabetes Mellitus Associated Complex Disorders”, National Symposium on Bioinformatics and Computational Systems Biology, Central University Himachal Pradesh, TAB-Shahpur, Kangra, 12-14 November 2016.

105) Resource Person in practical workshop, Databases, Sequence alignment, Multiple sequence alignment and Phylogenetic trees, Bhaskaracharya College, Delhi, Feb 21, 28, March 6, 2016.

104) Algorithmic approaches to mining from biomedical texts for integrative data analytics. Silver Jubilee Celebration of Bioinformatics and computational biology at JNU, March 1, 2016.

103) Pubmed.mineR - Algorithmic approaches to biomedical text mining: Application to Gene mining. International Conference on Translational Biotechnology "BioSangam 2016", MNNIT, Allahabad, Feb 4-6, 2016.

102) Resource Person, Gene Expression Analysis: Hands-on using Microarray and Next Generation Sequencing Data, Acharya Narendra Dev College, Delhi, March 7-9, 2015

101) Reaching beyond 3 Vs of ‘Big Data’: using R 20th Refresher course Course in Life Sciences, UGC Academic Staff College, JNU, Feb 4, 2015

100) Using integrative approaches combining bioinformatics and experiments for new advances. 4th August 2014 UGC Academic Staff College, Biotechnology Faculty development program, Jawaharlal Nehru University, New Delhi.

99) Integrative Bioinformatics approaches for Novel Discoveries. 2nd August 2014 JIIT University, Noida.

98) Integrative Approaches in Bioinformatics useful for Novel Discoveries. Genomics & Proteomics Research June 12, 2014 SELECTBIO, Radisson Blu Plaza, New Delhi

97) Integration of gene expression and metabolic reactions models provides insights into robustness and drug target points in M. tuberculosis. Seminar -Cum-Workshop on "Evolutionary Genomics” Tezpur University, Tezpur, Feb 14 – 17, 2014

96) Integrative Bioinformatics Approaches: Immunoinformatics, December 11, 2013, Computational Tools for Animal Genome Resource Data Analysis (2nd December to 13th December 2013), National Bureau of Animal Genetic Resources, Karnal

95) Integrative Bioinformatics: A few case examples of infectious diseases, National Medical Biochemistry conference (AMBICON-2013) from 14 November 2013 at Christian Medical College, Ludhiana

94) Integrated Bioinformatics approaches reveal new insights: a case study of Mycobacterium tuberculosis,CEP Course Defence Institute of Physiology and Allied Sciences (DIPAS), Delhi, September 25, 2013

93) Gene Co-expression analysis as another approach for identifying potential drug targets in M. tuberculosis, 5th workshop on Bioinformatics and molecular modeling in Drug design, March 21-23, 2013, ACBR, University of Delhi.

92) Identification of novel adhesins of M. tuberculosis H37Rv using integrated approach of multiple algorithms and experimental analysis. Kolkata International School cum Conference on Systems Biology, Kolkata, December 28, 2012 – January 3, 2013, Saha Institute of Nuclear Physics & Bose Institute, Kolkata.

91) Case examples of Cheminformatics, integrated immunoinformatics, and Single Nucleotide Variations. Kolkata International School cum Conference on Systems Biology, Kolkata, December 28, 2012 – January 3, 2013, Saha Institute of Nuclear Physics & Bose Institute, Kolkata.

90) Introduction to Quantitative analysis for Biologists. Kolkata International School cum Conference on Systems Biology, Kolkata, December 28, 2012 – January 3, 2013, Saha Institute of Nuclear Physics & Bose Institute, Kolkata.

89) Multiple Sequence Alignment and Phylogenetic Analysis. December 24, 2012. Add on Course, Bhaskaracharya College, Delhi University, Dwarka, Delhi.

88) Development of new algorithms for analysis of genomics data from pathogens. Bioinformatics Workshop, October 11, 2012, IIT Delhi,

87) Sequence Databases and alignments and finding Orthologs October 5, 2012. Add on Course, Bhaskaracharya College, Delhi University, Dwarka, Delhi.

86) Analysis of Genomics Data from Pathogens, September 26 2012, Indian Science Congress Association, Shillong Chapter, NEHU, Shillong

85) Bioinformatics Workshop on Recent trends in Genomics and Databases, September 24 – 27, 2012, NEHU, Shillong

84) Shachi Gahoi, Rahul Shubhra Mandal, Nikita Ivanisenko, Priyanka Shrivastava, Sriyans Jain, Ashish Kumar Singh, Muthukurrusi Varieth Raghunandanan, Swarna Kanchan, Bhupesh Taneja, Chhabinath Mandal, Vladimir A. Ivanisenko, Anil Kumar, Rita Kumar [Open Source Drug Discovery Consortium], Srinivasan Ramachandran, Computational screening for new inhibitors of M. tuberculosis mycolyltransferases antigen 85 group of proteins as potential drug targets February 22-25, 2012, International Conference on Open Source for Computer-Aided Translational Medicine, Institute of Microbial Technology, Chandigarh, India

83) Srinivasan Ramachandran, Rupanjali Chaudhuri, Srikant Prasad Verma, Sequence analysis: Biological Data Modelling and Scripting in R December 14-16, 2011, Conference on Informatics & Integrative Biology" (CIIB-2011) at Kolkata during Bose Institute, Kolkata

82) Using the R platform for Systems Biology work. In Bioinformatics: Unravelling Genes and Proteins, a workshop for teachers from 10 to 15 May 2010, Miranda House, Delhi University, Delhi.

81) M. tuberculosis SysBorg R: An interoperable and reliable platform for analysis for systems biology. Indo-US Workshop on Informatics in Molecular Virology and Genetics, Pune, India, April 20-23, 2010.

80) Bioinformatics analysis for useful Biotechnological leads, Mizoram University, Aizawl November 27, 2009.

79) Bioinformatics analysis of pathogen genomes, National Workshop on Functional Genomics and Proteomics Institute of Life Sciences, Bhubaneswar, November 18-20, 2009.

78) Processes in open source drug discovery as a multiagency project, Symposium on Inhaled Tuberculosis Therapies, 3-5 Nov, 2009, IHC, New Delhi.

77) Datamining and Rational Drug Discovery: A case study, Rational Approaches in Drug Designing: Application of tools and techniques of Bioinformatics, Central Drug Research Institute, October 30, 2009.

76) Orientation Lecture for Open Source Drug Discovery, Deptt. Of Chemistry, Saurashtra University, Rajkot June 16, 2009.

75) Open Source model for Drug Discovery: A new concept, International Symposium on Biotechnology, Education, Research and Industrialization, School of Biotechnology, WhiteHouse College, Lalitpur, Nepal June 14, 2009.

74) New Approaches to Drug Discovery for combating Tuberculosis: the Open Source Concept UPE- lecture series at NEHU, Shillong, May 9, 2009.

73) Invited attended the System biology and Proteomics in Biomedical Science, IICB Kolkata, March 27-29, 2009 as part of CSIR Systems Biology core groups member.

72) New Approaches to Drug Discovery for combating Tuberculosis: The Open Source Concept, National Conference on Antimicrobial Resistance: From Emerging Threat to reality, March 25, 2009

71) Surface Adhesins of microbial pathogens, Open Source for Computer Aided Drug Discovery, March 22-23, 2009

70) Introduction to Machine Learning, IIT Short Term Course, March 12-13, 2009

69) High Throughput Biology & Microarrays, Training Workshop at North East Hill University, Shillong February 10-12, 2009.

68) Today's Bioinformatics, CPDHE, University of Delhi, February 6, 2009.

67) Attended the National Drug Discovery Conference 2009, January 21-23, 2009 at University of Delhi (South Campus), Delhi.

66) The Mycobacterium tuberculosis SysBorg Joint Indo-Russian Workshop "Systems Biology and Genome Informatics of M. tuberculosis and other infectious diseases" Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia October 12-14, 2008

65) "Application Bioinformatics for infectious diseases" The BGRS'2008 International Summer School for Young Scientists "Evolution, Systems Biology and High Performance Computing Bioinformatics" Novosibirsk, Russia, June 29-July 2, 2008.

64) Intrinsically Disordered Proteins in Pathogens: The case of Rv3221c of Mycobacterium tuberculosis National WorkShop "Protein folding and bioinformatics" at Bose Institute, Kolkata March 4-5, 2008.

63) "M. tuberculosis SysBorg: how it got made and where is it leading to?" Recent Trends in Bioinformatics, Biotechnology and Metabolic pathway engineering MGM Institute Aurangabad, Feb 3, 2008.

62) Microarrays II, , in the workshop" inferring biological relationships Bioinformatics Centre, North East Hill University, Shillong, Dec 1, 2007

61) Microarrays I, in the workshop" inferring biological relationships, Bioinformatics Centre, North East Hill University, Shillong, Dec 1, 2007.

60) Introduction to Bioinformatics, Refresher course in Botany, Deptt. Of Botany, North East Hill University, Shillong Nov. 30, 2007

59) "Genome sequence databases", in the workshop" inferring biological relationships, Bioinformatics Centre, North East Hill University, Shillong, Nov. 30, 2007

58) "Genome Analysis", Bioinformatics Centre, in the workshop" inferring biological relationships, North East Hill University, Shillong, Nov. 30, 2007

57) "M. tuberculosis SysBorg: A Systems Biology platform leading to a bigger drug discovery platform" in Science of Life Symposium, Miranda House, Delhi University, Nov. 22, 2007

56) " Bioinformatics as the first step of Biotechnology in the future", National Workshop on Bioinformatics, Meerut Institute of Engineering and Technology, Nov. 18, 2007, Meerut.

55) "Genome sequencing and Molecular mapping", in Workshop on Biotechnology Education, Dehradun, Uttarakhand, October 6, 2007.

54) "Inaugural address on Bioinformatics", Shaheed Rajguru College of Applied Sciences for Women, University of Delhi, October 3, 2007.

53) "Using machine learning methods for developing algorithms to predict virulence factors in pathogens" DST Sponsored SERC School on Machine Learning and Pattern Evolution methods in Chemo and Bioinformatics, , Jointly organized by National Chemical Laboratory (NCL), Pune Centre for Development of Advanced Computing (C-DAC), Pune 26-29 June 2007.

52) "High-throughput Biology & Microarrays" Bioinformatics course in AIIMS (Biotechnology), March 21, 2007.

51) "The merit of Bioinformatics in Genomics era" Bioinformatics course in AIIMS (Biotechnology), March 20, 2007.

50) "Mining the Genomic Information for Biotechnological Applications" in National Seminar on "Frontiers in Biotechnology and Bioinformatics" Feb. 3, 2007.

49) "Bioinformatics approaches for Infectious Pathogens: Development of novel algorithms, platforms and applications with reference to Mycobacterium tuberculosis. Knowledge Discovery in Life Sciences: Tools & Techniques in Bioinformatics January29-February 2, 2007 University of Pune

48) "Development of novel algorithms and in silico analysis of proteomes" International conference on current trends in Industrial and Applied Mathematics(ICCTIAM07) from 16-18 January 2007, MS University, Vadodara

47) "Application of machine learning and statistical methods for analyzing complete sequences of genomes and proteomes" International Conference on Bioinformatics, INCOB 2006 December 18-20, 2006, New Delhi

46) "Genomics@IGIB" Second ASEAN-INDIA BIOINFORMATICS HRD PROGRAMME, Ashok Hotel, Dec. 14, 2006, New Delhi

45) "Systems Biology of Mycobacterium tuberculosis:mtb SysBorg Society of Biological Chemists(India)" 75th Annual Meeting, Dec. 9, 2006, Jawaharlal Nehru University, New Delhi

44) "Bioinformatics to Systems Biology: CSIR-IGIB concepts and efforts" at The First CUBIC-CDFD workshop on Bioinformatics and Genome Analysis, April 21-23, 2006, Cologne, Germany.

43) "Genomics, Bioinformatics and Integrative Biology: A tale of twins, repeats, virulence factors", Genomics and Proteomics Approaches for Drug Development" November 21-25, 2005, Biotech Park, Lucknow.

42) "Bioinformatics analysis of pathogenic Microbial surface proteins in virulence", IGIB Wednesday Forum discussion, Nov. 9, 2005.

41) "Prediction of Surface Proteins from Pathogens using Artificial Intelligence", Indo- Russian Seminar on Recent Trends in Applied Bioinformatics & Medi-informatics, IIIT, Allahabad, Nov. 6-7, 2005.

40) "Systems Biology of Mycobacterium tuberculosis: The CSIR In Silico Biology Networked Team Effort & Private-Public Partnership", Indo-Taiwan Joint Workshop on Functional Genomics, IGIB, Delhi, October 21, 2005.

39) "Bioinformatics Analysis of Surface Proteins", Machine Learning Techniques in Functional Proteomics, Institute of Microbial Technology, Chandigarh, October 19. 2005.

38) "Sequence Analysis, Multiple Sequence Analysis and Gene Identification", Lecture for Add-On course in Bioinformatics, Ramjas College, Delhi University, September 26, 2005.

37) "Identification of microbial adherence proteins using artificial intelligence as a new approach for drug targets and vaccine candidates" , Indo-Brazil-South Africa Trilateral Workshop on Functional Genomics, Life Science, GM Food and Agriculture July 18-19, 2005, IGIB, Delhi.

36) "Developing INDO-EU project on Systems Biology for Human Health, Paris, June 22-24, 2005.

35) "Identifying new candidates for vaccine development using Artificial Intelligence", Asian Regional Workshop on Intracellular Pathogens, ITREID and JNU, March 8-11, 2005, India Habitat Centre, New Delhi.

34) "A crusade against infectious pathogens: Development of anti-infectives using in silico approaches based on artificial pathogens", Vaccines and Drugs against Mycobacterial infections, February 10-11, 2005, Indian Institute of Technology, Kharagpur.

33) "A value added annotation system for fresh genome sequences from pathogenic organisms", Sino-India Workshop on Genome Informatics, Hangzhou, Shanghai, China October 27-30, 2004.

32) "Extracting useful leads from complete proteomes for Biotechnological Applications", Bioinformatics tools and their applications, October 20, NIIT campus at Indian Institute of Technology, Delhi.

31) "A neural network based approach for developing anti-infectives" at Techniche 2004, September 3-5, 2004, Indian Institute of Technology, Guwahati.

30) "Mining from complete proteomes to identify adhesins and adhesin-like proteins: A rapid aid to experimental researchers", July 25-30, Bioinformatics of Genome Regulation and Structure (BGRS 2004), Novosibirsk, Russia.

29) "Extracting useful leads from complete proteomes for Biotechnological Applications", Bioinformatics tools and their applications, July 15, Indian Institute of Technology, Delhi.

28) "Extracting useful leads from complete proteomes using Bioinformatics approaches", Training Programme in Bioinformatics, Biotech Park, Biotechnology City, Lucknow, July 13-15, 2004

27) "Blending Compositional Analysis with Artificial neural networks: A New Application to the Identification of Adhesins, Department of Computer Science, Technion Israel Institute of Technology, Haifa, Israel (summer 2004)

26) "Blending Compositional Analysis with Artificial neural networks: A New Application to the Identification of Adhesins, Institute of Evolution, University of Haifa, Haifa, Israel (summer 2004)

25) "Blending Compositional Analysis with Artificial neural networks: A New Application to the Identification of Adhesins, BigRoc Seminar, The Weizmann Institute of Science, Rehovot, Israel (summer 2004)

24) "Organizational Development Programme", CSIR India, IGIB, Delhi, April 26-27, 2004.

23) "Bioinformatics Applications" at "New generation veterinary vaccines & molecular techniques in animal disease diagnosis", National Biotechnology Centre, Indian Veterinary Research Institute, Izatnagar, Bareilly, 29th March 2004.

22) "Bioinformatics for beginners and in silico Proteomics of Microbial proteomes" at the Daulat Ram College, Delhi University, Delhi (2004)

21) "In silico Proteomics of Microbial proteomes" at the Swami Shraddanand College, Delhi University, Delhi. (2004)

20) "A multi-pronged approach to Tuberculosis" at The Indo-UK Tuberculosis meeting, CDFD, Hyderabad (January 12-13, 2004).

19) "Bioinformatics, Microarrays and Molecular Biology" at the CSIR-Pharma Industry Interaction, CDRI, Lucknow (November 27-28, 2003).

18) "Bioinformatics approaches to analysis of genomic information" at the Indo-French Interactive Seminar on Bioinformatics and Proteomics, CCMB, Hyderabad (December 15-16, 2003).

17) "Simple sequences in proteins and in the DNA: Structural and functional roles" at the 10th FAOBMB symposium, IISc, Bangalore (December 7-11, 2003).

16) "Gene Expression variation in natural population: A perspective from (TG/CA)n repeats" at International Symposium On Molecular Toxicology And Environmental Health, ITRC, Lucknow (November 5-8 2003).

15) "Mining genomic sequences and microarray data using novel computational approaches", at The Max Planck Institute of Genetics, Berlin (September 18-19, 2003). Sponsored by The Department of Biotechnology, Govt. of India.

14) "Bioinformatics analysis of genomic and microarray data" at Tata Energy Research Institute, on DNA based marker technologies and its applications, July 21-31, 2003.

13) "Bioinformatics for Class XII" At the Biotechnology workshop held at Army School, CBSE, Ferozepur Cantt. Ferozepur, June 2003.

12) "Comparative analysis of microbial sequences using complexity analysis" At the Bioinformatics Workshop, Industrial Toxicology Research Centre, Lucknow (January 2003)

11) "Differential gene expression analysis using microarrays" At the Department of Biotechnology, All India Institute of Medical Sciences, New Delhi (Feb. 2003)

10) "Comparative analysis of E. coli and M. tuberculosis genomes" as a special invitee to The Guha Research Conference (2002)

9) "Bioinformatics and Microarrays" At The Consultancy Development Centre, India Habitat Centre (2002)

8) "Computational analysis of Microbial genomes" At The Society of Young Scientists meeting in AIIMS (2002)

7) "Sequence metrics & RNA secondary structure from comparative analysis" At Workshop on Computational Genomics held in Indian Statistical Institute, Barrackpore trunk road, Kolkata (Dec. 2001).

6) "A course on Comparative genomics" As part of Advanced diploma in Bioinformatics, Jawaharlal Nehru University, New Delhi 110 067 (Nov. 2001)

5) "Basics of Bioinformatics" At Delhi University Teachers training workshop lecture cum demonstration in Bioinformatics (2001)

4) "Basics of Bioinformatics" As part of M.Sc. course in Dr. B.R. Ambedkar Centre for Biomedical Research, Delhi University (2000)

3) "Biotechnology and the new biology emerging from Genomics research" At School of Biotechnology, Indraprastha University. (1999)

2) "Bioinformatics softwares: The GCG package" At BIOINFORMATICS Workshop held in Delhi University, South Campus (1993).

1) "Bioinformatics softwares: The GCG package" At BIOINFORMATICS Workshop held in Jawaharlal Nehru University (1993).