Machine-learning methods for single-cell analysis
12 noon - 5:40 CDT, Aug. 1st, 2021
12 noon - 5:40 CDT, Aug. 1st, 2021
Co-chairs: Lana Garmire (U Michigan) Smita Krishnaswamy (Yale), Jie Liu (U Michigan), Joshua Welch (U Michigan)
News: Two best awards will be given! Thanks to the sponsorship from the Department of Computational Medicine & Bioinformatics of University of Michigan!
Keynote Speakers:
Dr. Jame Zou
Stanford Universtiy
Panelists:
Dr. Rong Fan, Yale University
Dr Naftali Kaminski, Yale University
Dr. Kathryn Roeder, CMU
Dr. James Zou, Stanford
Dr. David Craig, USC
Program Committee:
Lana Garmire (U Michigan) Smita Krishnaswamy (Yale), Jie Liu (U Michigan), Joshua Welch (U Michigan), Ritambhara Singh (Brown University), Yang Lu (University of Washington)
The new revolution brought by single-cell genomics technologies to various biomedical fields is exciting in that it can offer unprecedented views of the inner workings of cells. However, this is accompanied with numerous challenges in single-cell analysis including, noise, sparsity, “curse” of high dimensionality, and lack of continuous-time measurements. Moreover, single-cell data have rapidly evolved from mostly transcriptomics data, to much more complex and heterogenous multi-omics data and multi-modal data types. A recent perspective laid out “Eleven Grand Challenges in Single-Cell Data Science” (Genome Biology, 2020); however, overcoming these grand challenges requires significant efforts in methodological innovation and benchmarking standardization. This workshop aims to be a platform to engage active discussions and participation on new machine-learning methodologies for single-cell analysis. Topics include but are not limited to:
-Benchmarking/standardization of single-cell analysis methods
-Alignment of single-cell studies across technology platforms, tissues and organisms
-Integration of multi-omics data at single-cell resolution
-Integration of single-cell with spatially informed omics studies
-Inference of disease (eg. tumor) progression through time and space
-Scaling up of single-cell based inference to higher resolutions, at tissue, organ, individual and population levels
-Learning dynamics and trajectories from single-cell snapshots
Workshop Name: machine learning methods for single-cell analysis
Conference Name: ACM-BCB virtual conference
Time: Aug 1st, 12-5:40PM CDT, 2021
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Abstract submissions due: July 5th, 2021
Notification of abstract/poster acceptance: July 12th, 2021
Abstracts may be up to 400 words, and may include a single figure and caption.
Submit through EasyChair: https://easychair.org/conferences/?conf=acmbcbsc21
Go to: ACM-BCB 2021
Fees : For Attendees $100 (member), $150 (non-member), $50 (trainee)