Software

Biomedical Literature Mining

BSLDA: Sparse Linear Discriminant Analysis using Network-Guided Block Covariance Matrix.

• GitHub page

PALMER: A constrained biclustering algorithm to improve Pathway Annotation based on the biomedical Literature Mining.

• GitHub page or GitHub page (Dongjun Chung)

LitSelect: A data downloader for PALMER.

• LitSelect web interface

hubViz: A novel tool for hub-centric Visualization.

• GitHub page or GitHub page (Dongjun Chung)

Related Sites

chunglab.io

• The portal for the software and web interface developed by Chung lab.

GAIL: Web interface to investigate gene-gene association based on the biomedical literature mining.

• GAIL web interface