Preprints:
17. P Chakraborty, M Nandi and S Choubey, Phase separation as a tunable regulator of canonical gene regulatory motifs. Link
16. M Nandi, S Chattopadhyay and S K Banik, Identifying the sources of noise synergy and redundancy in the gene expression of feed-forward loop motif. Link
15. P Ray, P Rao T, M Nandi, A Haque, S Mitra, S Raychaudhuri, A Ghosh-Roy and S Polley, Activation and regulation of a p38α MAPK by its downstream MAPKAP kinase through feedback phosphorylation and LLPS-driven condensate formation. Link
Published:
2025
14. M Nandi, S Shekhar and S Choubey, A generalized theoretical framework to investigate multicomponent actin dynamics, PLOS Comput. Biol. 21 (9) e1013434 (2025). Link
13. D Koiri, M Nandi, A Hameem P M, A J Bhausaheb, G Meher, A Behura, A Kumar, V Choudhary, S Choubey and M Saleem, Real-time visualization reveals Mycobacterium tuberculosis ESAT-6 disrupts phagosome-like compartment via fibril-mediated vesiculation, Cell Rep. 44 (3) 115328 (2025). Link
2024
12. M Nandi, Emergence of temporal noise hierarchy in co-regulated genes of multi-output feed-forward loop, Phys. Biol. 22 (1) 016006 (2024). Link
11. M Nandi, S Chattopadhyay, S Bandyopadhyay and S K Banik, Channel assisted noise propagation in a two-step cascade, Chaos 34 083128 (2024) [Focus Issue: Anomalous Diffusion and Fluctuations in Complex Systems and Networks]. Link
2023
10. T S Roy, M Nandi, S Chattopadhyay, P Chaudhury and S K Banik, Interplay of degeneracy and non-degeneracy in fluctuations propagation in feed-forward loop motif, J Stat. Mech. 2023 (9) 093502 (2023). Link
9. S Ghorai, M Nandi and P Chaudhury, Impurity effects on phase change in Lennard-Jones atomic clusters, J. Chem. Sci. 135 (2) 35 (2023). Link
2022
8. M Nandi, Information restriction in two-step cascade: Role of fidelity and fluctuations, J. Stat. Mech. 2022 (12) 123502 (2022). Link
2021
7. T S Roy, M Nandi, A Biswas, P Chaudhury and S K Banik, Information transmission in a two-step cascade: Interplay of activation and repression, Theo. in Biosc. 140 (3), 295-306 (2021). Link
6. S Dhatt, M Nandi and P Chaudhury, Substrate inhibition versus product feedback inhibition: In the perspective of single molecule enzyme kinetics, Int. J. Chem. Kin. 53 (6), 775–786 (2021). Link
5. M Nandi, Role of integrated noise in pathway specific signal propagation in feed-forward loops, Theo. in Biosc. 140 (2) 139-155 (2021). Link
2020
4. N De, M Nandi, S K Banik and S Roy, Bi-stability of the master gene regulatory network of the common dendritic precursor cell: Implications for cell differentiation, IUBMB life 72 (10), 2225-2232 (2020). Link
2019
3. M Nandi, P Chaudhury and S K Banik, Restricted information in a two-step cascade, Phys. Rev. E 100 (3), 032406 (2019). Link
2018
2. M Nandi, A Biswas, P Chaudhury and S K Banik, Information processing in a simple one-step cascade, Phys. Rev. E 98 (4), 042310 (2018). Link
2016
1. A Kumar, S Chatterjee, M Nandi and A Dua, Emergence of dynamic cooperativity in the stochastic kinetics of fluctuating enzymes, J. Chem. Phys. 145 (8), 085103 (2016). Link