Papers


*  co-first 

# co-corresponding 


Advances in the multimodal analysis of the 3D chromatin structure and gene regulation

Man-Hyuk Han*, Jihyun Park*, Minhee Park

Experimental & Molecular Medicine (2024)

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Synthetic Interventions in Epigenome: Unraveling Chromatin's Potential for Therapeutic Applications

Junyoung Kim*, Jonghyun Kim*, Minhee Park

Current Opinion in Systems Biology, 37:100504 (2024)

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Interplay between epigenome and 3D chromatin structure

Man-Hyuk Han*, Dariya Issagulova*, Minhee Park

BMB Reports, 56(12):633-644 (2023)

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Loop stacking organizes genome folding from TADs to chromosomes

Antonina Hafner, Minhee Park, Sedona Murphy, Scott E. Berger, Elphège P. Nora,  Alistair N. Boettiger

Molecular Cell, 83:1377-1392 (2023)

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Transcriptional kinetic synergy: A complex landscape revealed by integrating modeling and synthetic biology

Rosa Martinez-Corral*, Minhee Park*, Kelly Biette*, Dhana Friedrich, Clarissa Scholes, Ahmad S Khalil, Jeremy Gunawardena, Angela DePace

Cell Systems, 14:324-339 (2023)

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Structural elements promote architectural stripe formation and facilitate ultra-long-range gene regulation at a human disease locus

Liang-Fu Chen*, Hannah Katherine Long*, Minhee Park, Tomek Swigut, Alistair Boettiger#, Joanna Wysocka#  

Molecular Cell, 83:1446-1461 (2023)

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Engineering epigenetic regulation using synthetic read-write modules. 

Minhee Park, Nikit Patel,  Albert Keung#,  Ahmad Khalil#  

Cell, 176: 227-238 (2019) 

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Recommended by Faculty of 1000

Commentary in Nature Reviews Genetics by Michelle Trenkmann    link

Molecular Cell by Timothy Chang, James Kuo & Pamela Silver    link

Nature Methods by Nicole Rusk    link

Biochemistry by Theresa Loveless & Chang Liu    link

Nature Chemical Biology by Yiyun Song    link



Coordinated regulation of acid resistance in Escherichia coli.

Patricia Aquino, ... Minhee Park, ... James E Galagan

BMC Systems Biology, 11:1-15 (2017) 

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The epigenome: the next substrate for engineering. 

Minhee Park, Albert Keung, Ahmad Khalil 

Genome Biology, 17: 183 (2016)

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