Introduction to microRNAs (iBiology)
MicroRNAs: genomics, biogenesis, mechanism, and function
Bartel DP
Cell. 2004; 116(2), 281–297. https://doi.org/10.1016/s0092-8674(04)00045-5
MicroRNAs: target recognition and regulatory functions
Bartel DP
Cell. 2009; 136(2), 215–233. https://doi.org/10.1016/j.cell.2009.01.002
Metazoan MicroRNAs
Bartel DP
Cell. 2018; 173(1), 20–51. https://doi.org/10.1016/j.cell.2018.03.006
Biogenesis and regulation of the let-7 miRNAs and their functional implications.
Lee H, Han S, Kwon CS, & Lee D
Protein & cell. 2016; 7(2), 100–113. https://doi.org/10.1007/s13238-015-0212-y
SCRAP: a bioinformatic pipeline for the analysis of small chimeric RNA-seq data
Mills WT, IV, Eadara S, Jaffe AE, and Meffert MK
RNA. 2023 Jan; 29(1): 1–17. doi:10.1261/rna.079240.122
Code: github.com/Meffert-Lab/SCRAP
Genome-wide and Cell-type Selective Profiling of In Vivo Small Noncoding RNA:Target RNA Interactions by Chimeric RNA Sequencing
Li X*, Mills WT, IV*, Jin DS, and Meffert MK
Cell Rep Methods. 2024. doi.org/10.1016/j.crmeth.2024.100836
Molecular strategy for genome-wide and cell-type selective profiling of in vivo small noncoding RNA:target RNA interactions by CIMERA-seq
Li X, Eiss EA, Mills WT, IV, and Meffert MK
STAR Protoc. 2024. doi.org/10.1016/j.xpro.2024.103477