Refereed Journal Papers
Norihiko Masuda, Kaoru Murakami, Yuki Kita, Akihiro Hamada, Mayumi Kamada, Yuki Teramoto, Toru Sakatani, Keiyu Matsumoto, Takeshi Sano, Ryoichi Saito, Yasushi Okuno, Osamu Ogawa, Takashi Kobayashi (2020) "Trp53 mutation in Krt5-expressing basal cells facilitates the development of basal squamous-like invasive bladder cancer in the chemical carcinogenesis of mouse bladder", American Journal of Pathology, pii: S0002-9440(20)30202-9. doi:10.1016/j.ajpath.2020.04.005.
Mayumi Kamada*, Masahiko Nakatsui*, Ryosuke Kojima, Sachio Nohara, Eiichiro Uchino, Shigeki Tanishima, Masaya Sugiyama, Kenjiro Kosaki, Katsushi Tokunaga, Masashi Mizokami, Yasushi Okuno (2019) "MGeND: an integrated database for Japanese clinical and genomic information", Human Genome Variation, 6, 53 (2019). https://doi.org/10.1038/s41439-019-0084-4 ( *... contributed equally to this work)
Pham Nguyen Quy, Masashi Kanai, Keita Fukuyama, Tadayuki Kou, Tomohiro Kondo, Yoshihiro Yamamoto, Junichi Matsubara, Akinori Hiroshima, Hiroaki Mochizuki, Tomohiro Sakuma, Mayumi Kamada, Masahiko Nakatsui, Yuji Eso, Hiroshi Seno, Toshihiko Masui, Kyoichi Takaori, Sachiko Minamiguchi, Shigemi Matsumoto, Manabu Muto (2019) "Association Between Preanalytical Factors and Tumor Mutational Burden Estimated by Next‐Generation Sequencing‐Based Multiplex Gene Panel Assay", The Oncologist, 24(12): e1401-e1408. DOI: 10.1634/theoncologist.2018-0587
Shinnosuke Ikemura*, Hiroyuki Yasuda, Shingo Matsumoto*, Mayumi Kamada*, Junko Hamamoto*, Keita Masuzawa, Keigo Kobayashi, Tadashi Manabe, Daisuke Arai, Ichiro Nakachi, Ichiro Kawada, Kota Ishioka, Morio Nakamura, Ho Namkoong, Katsuhiko Naoki, Fumie Ono, Mitsugu Araki, Ryo Kanada, Biao Ma, Yuichiro Hayashi, Sachiyo Mimaki, Kiyotaka Yoh, Susumu S. Kobayashi, Takashi Kohno, Yasushi Okuno, Koichi Goto, Katsuya Tsuchihara, Kenzo Soejima (2019) "Molecular dynamics simulation-guided drug sensitivity prediction for lung cancer with rare EGFR mutations", Proceedings of the National Academy of Sciences, 201819430; DOI: 10.1073/pnas.1819430116. ( *... contributed equally to this work)
Ayaka Mizumoto, Shinya Ohashi, Mayumi Kamada, Tomoki Saito, Yukie Nakai, Kiichiro Baba, Kenshiro Hirohashi, Yosuke Mitani, Osamu Kikuchi, Junichi Matsubara, Atsushi Yamada, Tsukasa Takahashi, Hyunjin Lee, Yasushi Okuno, Masashi Kanai, Manabu Muto (2019) , “Combination treatment with highly absorbable nanoparticular curcumin and NQO1 inhibitor exhibits potent antitumor effects on esophageal squamous cell carcinoma”, Journal of Gastroenterology, 54, 687–698, https://doi.org/10.1007/s00535-019-01549-x.
Keiko Yamada, Hitomi Sato, Kazuma Sakamaki, Mayumi Kamada, Yasushi Okuno, Nobuyuki Fukuishi, Kazuyuki Furuta, Satoshi Tanaka (2019) “Suppression of IgE-Independent Degranulation of Murine Connective Tissue-Type Mast cells by Dexamethasone”, Cells, 8(2), 112, https://doi.org/10.3390/cells8020112.
Morihiro Hayashida, Noriyuki Okada, Mayumi Kamada, Hitoshi Koyano (2018), "Improving conditional random field model for prediction of protein-RNA residue-base contacts", Quantitative Biology, vol. 6 (2), pp.155–162
Yu Bao, Simone Marini, Takeyuki Tamura, Mayumi Kamada, Shingo Maegawa Hiroshi Hosokawa, Jiangning Song, Tatsuya Akutsu (2018), "Toward more accurate prediction of caspase cleavage sites: a comprehensive review of current methods, tools and features", Briefings in Bioinformatics, bby041,
Tadayuki Kou, Masashi Kanai, Yoshihiro Yamamoto, Mayumi Kamada, Masahiko Nakatsui, Tomohiro Sakuma, Hiroaki Mochizuki, Akinori Hiroshima, Aiko Sugiyama, Eijiro Nakamura, Hidehiko Miyake, Sachiko Minamiguchi, Kyoichi Takaori, Shigemi Matsumoto, Hironori Haga, Hiroshi Seno, Shinji Kosugi, Yasushi Okuno and Manabu Muto (2017), "Clinical Sequencing Using a Next-Generation Sequencing-Based Multiplex Gene Assay in Patients with Advanced Solid Tumors ", Cancer Science,108(7), pp.1440-1446
Ken Uchibori, Naohiko Inase, Mitsugu Araki, Mayumi Kamada, Shigeo Sato, Yasushi Okuno, Naoya Fujita and Ryohei Katayama (2017) "Brigatinib combined with anti-EGFR antibody overcomes Osimertinib resistance in EGFR-mutated non-small-cell lung cancer", Nature Communications, vol.8, 14768
Ryusuke Murakami, Noriomi Matsumura, J. B. Brown, Koichiro Higasa, Takanobu Tsutsumi, Mayumi Kamada, Hisham Abou-Taleb, Yuko Hosoe, Sachiko Kitamura, Ken Yamaguchi, Kaoru Abiko, Junzo Hamanishi, Tsukasa Baba, Masafumi Koshiyama, Yasushi Okuno, Ryo Yamada, Fumihiko Matsuda, Ikuo Konishi, Masaki Mandai (2017) , "Exome Sequencing Landscape Analysis in Ovarian Clear Cell Carcinoma Shed Light on Key Chromosomal Regions and Mutation Gene Networks", The American Journal of Pathology, vol.187(10), pp.2246-2258
Mayumi Kamada, Sumitaka Hase, Kazushi Fujii, Masato Miyake, Kengo Sato, Keitarou Kimura, Yasubumi Sakakibara (2015), “Whole-genome sequencing and comparative genome analysis of Bacillus subtilis strains isolated from non-salted fermented soybean foods”, PLoS ONE, vol.10(10), e0141369.
Mayumi Kamada and Mikito Toda (2014), “Dynamics of Protein Structure: Analysis with Wavelet Transformation”, Proceedings of the Institute of Statistical Mathematics, vol. 62, no. 2, pp.203-220 ( in Japanese ).
Mayumi Kamada, Sumitaka Hase, Kengo Sato, Atsushi Toyoda, Asao Fujiyama, Yasubumi Sakakibara (2014), “Whole genome complete resequencing of Bacillus subtilis natto by combining long reads with high-quality short reads”, PLoS ONE, 9(10): e109999.
Mayumi Kamada, Yusuke Sakuma, Morihiro Hayashida, Tatsuya Akutsu (2014), “Prediction of protein-protein interaction strength using domain features with supervised regression”, The Scientific World Journal, vol. 2014, Article ID 240673, 7 pages.
Morihiro Hayashida, Mayumi Kamada, Jiangning Song, Tatsuya Akutsu (2013), “Predicting Protein- RNA Residue-base Contacts Using Two-dimensional Conditional Random Field”, BMC Systems Biology, vol. 7, S15.
Ozgur Demir-Kavuk*, Mayumi Kamada*, Tatsuya Akutsu, Ernst-Walter Knapp (2011), “Prediction using step-wise L1, L2 regularization and feature selection for small data sets with large number of features”, BMC Bioinformatics, vol.12, pp.412. (* Equal contributors)
Morihiro Hayashida, Mayumi Kamada, Jiangning Son, Tatsuya Akutsu (2011), “Conditional random field approach to prediction of protein-protein interaction using domain information”, BMC System Biology, vol.5, S8.
Mayumi Kamada, Mikito Toda, Masakazu Sekijima, Masami Takata, Kazuki Joe (2011), “Analysis of motion features for molecular dynamics simulation of proteins”, Chemical Physics Letters, 502, pp.241-247.
Book Chapter
Mayumi Kamada and Yasushi Okuno (2021) "AIM in Genomic Basis of Medicine: Applications". In: Lidströmer N., Ashrafian H. (eds)
Artificial Intelligence in Medicine. Springer, Cham. https://doi.org/10.1007/978-3-030-58080-3_264-1, 2021 June
「バリアントデータ検索＆活用 変異・多型情報を使いこなす達人レシピ（実験医学別冊）」(羊土社) Chapter 1. (3), 2020 September
「医薬品開発におけるオミクス解析技術～ゲノム・トランスクリプトーム・プロテオーム・メタボローム～」（情報機構）第1章 第1節, 2020 March
「バイオインフォマティクス入門」(慶應義塾大学出版会), 第 2 章 計算化学 榊原康文, 舟橋啓, 鎌田真由美, 小森 隆, 佐藤健吾, 浜田道昭, 2015 August
Review Article
鎌田真由美, 中津井雅彦, 奥野恭史「日本人疾患ゲノム情報統合データベースMGeND」実験医学増刊, Vol.39 No.7, 2021
荒木望嗣, 鎌田真由美, 奥野恭史「プレシジョン・メディシンを加速する創薬ビッグデータ統合システムの推進」, 国立科学博物館 milsil, Vol.13 No.6, 2020
奥野恭史, 小清水宏, 鎌田真由美, 玉田嘉紀, 小島諒介, 内野詠一郎「データ主導型個別化医療と予測医療」, 医学情報誌あいみっく 41(1), 2020
田中良尚, 小島諒介, 玉田嘉紀, 鎌田真由美, 奥野恭史「分子レベルにおけるAIの創薬応用」, 実験医学, 2019年10月号 Vol.37 No.16, 2019
奥野 恭史, 中津井 雅彦, 鎌田 真由美 「疾患レジストリーと知識データベース」, 日本医師会雑誌, 平成30年10月号, 2018
鎌田 真由美 「人工知能がもたらす創薬イノベーション ： 3. 診断・治療～臨床・診断」, 医薬ジャーナル, 2018年9月号 (Vol.54 No.9), 2018
鎌田 真由美, 中津井 雅彦, 奥野 恭史「がんゲノム医療用知識データベース」, 実験医学増刊 , Vol.36 No.15, 2018
藤原 大, 鎌田 真由美, 奥野 恭史 「人工知能を用いた創薬（AI創薬）」, 癌と化学療法, vol.45 (4), pp.593-596, 2018
鎌田 真由美, 奥野 恭史「日本人のためのゲノム医療用AI、2018年度中に試行開始」, 週刊医学界新聞, 第3254号, 2018
佐藤 憲明, 内野 詠一郎, 鎌田 真由美, 奥野 恭史「Precision Medicine実現に必要なシミュレーション科学とデータ科学（data centric science）」, 腫瘍内科, vol.20 (4), pp.306-312, 2017.
内野 詠一郎, 種石 慶, 中津井 雅彦, 鎌田 真由美, 荒木 望嗣, 奥野 恭史「臨床ビッグデータ解析の展望—実臨床データとゲノム情報への応用」, 生体医工学, vol.55 (4), pp.173-182, 2017.
中津井 雅彦, 鎌田 真由美, 荒木 望嗣, 奥野 恭史 「スパコン「京」によるインシリコ創薬」, 日本薬理学雑誌, vol.149 (6), pp. 281-287, 2017
Invited talk
鎌田真由美 (2021) "個別化医療実現に資するデータ基盤の構築", 第26回 国際個別化医療学会学術集会, presented in Japanses, Tokyo Japan, November 28th, 2021
Mayumi Kamada (2021) “Development of data infrastructure and in silico prediction method to promote genomic medicine”, The 4th International Conference on Bioinformatics, Biotechnology, and Biomedical Engineering (BioMIC 2021), Online, October 6th, 2021
鎌田 真由美 (2021) "生体分子の構造ダイナミクスとゲノム医療への応用" , 「複雑系数理：物理・化学・生物・情報 と カオス」シンポジウム, presented in Japanese, Online, March 28th, 2021
鎌田 真由美 (2021) "社会変革型医療データサイエンティスト育成プログラムについて" 第41回 兵庫医療情報研究会, presented in Japanese, Online, March 20th, 2021.
鎌田真由美 (2020) "ゲノム医療実装を加速するためのビッグデータ・AI技術の活用", JDream SR Webセミナー, presented in Japanese, Online, November 6th & 11th, 2020
鎌田 真由美 (2020) "医療ビッグデータ活用と人材育成への取り組み", 第28回 バイオメディカル研究会, presented in Japanese, Osaka Japan, August 18th, 2020
鎌田 真由美 (2019) "日本人疾患関連ゲノム情報統合データベースMGeNDの構築", 第1回 希少疾患インフォマティクス：情報保護・情報共有・社会実装, presented in Japanese, Tokyo Japan, February 16-17th, 2019.
Mayumi Kamada, Masahiko Nakatsui, Yasushi Okuno (2018) "Construction of clinical genome information database to promote precision medicine", The 63rd Annual Meeting of the Japan Society of Human Genetics (Symposium 16 Public database and application for medicine in Japan and Asia), Yokohama Japan, October 13th, 2018.
Mayumi Kamada (2018) "Developing prediction methods for disease treatment and prevention taking into account individual variability", Artificial Intelligence Meets Life Sciences – 5th RIKEN-KI/SciLifeLab Symposium, Stockholm, Sweden, September 20th, 2018.
鎌田 真由美 (2017) "医療分野におけるバイオインフォマティクス人材育成・確保", 第3回 クリニカルバイオバンク研究会シンポジウム（シンポジウム5 バイオバンクの人材育成）, presented in Japanese, Chiba Japan, July 9th, 2017.
奥野 恭史, 松村 謙臣, 鎌田 真由美, 村上 隆介 (2015) "がん治療医のためのバイオインフォーマテイクス実践講座", 第 53 回日本癌治療学会教育シンポジウム講演 The 53rd Annual Meeting of Japan Society of Clinical Oncology, presented in Japanese, Kyoto Japan, October 29th, 2015.
Mayumi Kamada (2014), “Whole genome resequencing of Bacillus subtilis natto using PacBio sequencer” PacBio-Field community seminar, presented in Japanese, Tokyo Japan, May 16th, 2014.
Mayumi Kamada, Mikito Today, Masami Takata and Kazuki Joe (2009), “Analysis of protein structure dynamics”, Workshop for Singular value and Eigen value, presented in Japanese, Tsukuba Japan, November 21th, 2009.
International Conference (peer review) (◦...presenter)
Oral Talk
◦Mayumi Kamada (2020) "Development of integrated database and knowledge-base for precision medicine", The 5rd International Symposium on BioComplexity (ISBC), Beppu, Japan, January 2020.
◦Masahiko Nakatsui, Mayumi Kamada, Ryosuke Kojima, Yasushi Okuno (2018) "MGeND: a New Integrated Database of Clinical and Genomic Information Developed in Japan", International Congress on Pure & Applied Chemistry (ICPAC) 2018, Siem Reap Cambodia, March 2018.
Mayumi Kamada (2018) "Integrated database of genomic and clinical information to promote precision medicine in Japan", The 3rd International Symposium on BioComplexity (ISBC), Beppu, Japan, January 2018.
Yusuke Sakuma, ◦ Mayumi Kamada, Morihiro Hayashida, Tatsuya Akutsu (2013), “Inferring strengths of protein-protein interactions using support vector regression”, The 2013 International Conference on Parallel and Distributed Processing Techniques and Applications (PDPTA2013), USA, July 2013.
◦ Mayumi Kamada, Morihiro Hayashida, Jiangning Song, Tatsuya Akutsu (2011), “Discriminative random field approach to prediction of protein residue contacts”, 2011 IEEE Conference on Systems Biology, China, Sep. 2011.
◦ Mayumi Kamada, Sachi Kimura, Mikito Toda, Masami Takata, Kazuki Joe (2009), “Clustering the Temporal Sequences Feature of 3D Protein Structure”, The 2009 International Conference on Parallel and Distributed Processing Techniques and Applications (PDPTA2009), USA, July 2009.
◦ Mayumi Kamada, Natsu Nakajima, Chisato Ishikawa, Masami Takata, Kazuki Joe (2008), “Construction of an Ethanol-Tolerant Yeast Model using the E-cell System”, The 2008 International Conference on Parallel and Distributed Processing Techniques and Applications (PDPTA2008), USA, July 2008.
Poster
◦Mayumi Kamada, Rei Ashine, Masahiko Nakatsui, Yasushi Okuno (2021) "Towards a more usable database: MGeND 2021 update", American Society of Human Genetics (ASHG) 2021 Annual Meeting, Online, October 2021.
◦Rei Ashine, Mayumi Kamada, Masahiko Nakatsui, Ryosuke Kojima, Yasushi Okuno (2020) "East Asian population-specific variants and cross-disease variants: Detailed analysis based on MGeND records and database improvement.", American Society of Human Genetics (ASHG) 2020 Annual Meeting, Online, October 2020.
◦Mayumi Kamada, Toshiaki Katayama, Shuichi Kawashima, Ryosuke Kojima, Masahiko Nakatsui, Yasushi Okuno (2019) "Med2RDF: Semantic Biomedical Knowledge-base and APIs for the Clinical Genome Medicine", The 12th International Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4LS) Conference, Edinburgh Scotland, December 2019.
◦Mayumi Kamada, Masahiko Nakatsui, Ryosuke Kojima, Eiichiro Uchino, Yasushi Okuno (2019) "Medical Genomics Japan Database (MGeND): 2019 update", ASHG 2019 Annual Meeting, Huston United States, October 2019.
◦Toshiaki Katayama, Mayumi Kamada, Shuichi Kawashima, Masahiko Nakatsui, Ryosuke Kojima, Yasushi Okuno (2019) "Development of semantic APIs for biomedical databases standardized in Med2RDF", ASHG 2019 Annual Meeting, Huston United States, October 2019.
◦Mayumi Kamada, Mikito Toda (2019), "Evaluation of differences in protein dynamics caused by genomic variant using time-series data", The annual international conference on Intelligent Systems for Molecular Biology (ISMB), Basel Switzerland, July 2019.
◦Masahiko Nakatsui, Mayumi Kamada, Eiichiro Uchino, Ryosuke Kojima, Yasushi Okuno (2018) "MGeND: a new Integrated Database of Clinical and Genomic Information", ASHG 2018 Annual Meeting, San Diego United States, October 2018.
◦Toshiaki Katayama, Mayumi Kamada, Shuichi Kawashima, Masahiko Nakatsui, Ryosuke Kojima, Yasushi Okuno (2018) "Med2RDF: semantic knowledge base for clinical genome medicine", ASHG 2018 Annual Meeting, San Diego United States, October 2018.
◦Mayumi Kamada, Mikito Toda (2018) "Detection of differences in protein dynamics due to genomic mutation using wavelet transform", 2018 European Conference on Computational Biology (ECCB), Athens Greece, September 2018.
◦Mayumi Kamada, Mikito Toda (2018) " Feature extraction using wavelet transformation to reveal genomic variant effect on binding affinity of EGFR", The 16th Asia Pacific Bioinformatics Conference (APBC), Yokohama, Japan, January 2018.
◦Mayumi Kamada, Toshiaki Katayama, Shuichi Kawashima, Ryosuke Kojima, Masahiko Nakatsui, Yasushi Okuno (2017) "Construction of Knowledge-base for Clinical Interpretation of Genomic Variants", The 10th International Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4LS) Conference, Rome Italy, December 2017.
International Workshop (◦...presenter)
Oral Talk
◦Mayumi Kamada (2020) "MGeND : Medical Genomics Japan Variant Database", AMED-GA4GH GEM Japana Workshop, Sendai Japan, February 27th, 2020.
◦Mayumi Kamada (2019) "MGeND: Integrated database of genomic and clinical information to promote precision medicine in Japan", Symposium of the BioHackathon 2019, Fukuoka Japan, September 1st, 2019.
◦Mayumi Kamada (2019) "MGeND: Integrated database of genomic and clinical information to promote precision medicine in Japan", AMED-GA4GH GEM Japana Workshop, Sendai Japan, March 18th, 2019.
◦Mayumi Kamada (2018) "MGeND: Integrated database of genomic and clinical information to promote precision medicine in Japan", Symposium of the BioHackathon 2018, Matsue Japan, December 9th, 2018.
◦ Mayumi Kamada, Morihiro Hayashida, Jianging Song, Tatsuya Akutsu (2012), “Prediction of protein residue contacts based on residues coevolution using probabilistic model”, Computational System Biology 9th Hiddensee-Workshop, Germany, April 2012.
◦ Mayumi Kamada, Morihiro Hayashida, Jianging Song, Tatsuya Akuts (2011), “Prediction of Protein Residue Contacts using Discriminative Random Fields with Mutual Information”, The 11th Annual International Workshop on Bioinformatics and Systems Biology, Germany, July 2011.
Poster
◦ Mayumi Kamada, Morihiro Hayashida, Jianging Song, Tatsuya Akutsu (2012), “Prediction of protein residue-residue contacts using conditional random field based on residue coevolution”, The 12th Annual International Workshop on Bioinformatics and Systems Biology, USA, July 2012.
◦ Mayumi Kamada and Mikito Toda (2010), “Time-series Analysis of Protein Structure using Features of Motion”, The 10th Annual International Workshop on Bioinformatics and Systems Biology, Japan, July 2010.
Domestic Conference and Workshop (◦...presenter)
Oral Talk
◦Mayumi Kamada, Rei Ashine, Masahiko Nakatsui, Ryosuke Kojima, Yasushi Okuno(2021) "MGeND update: Efforts to improve usability and continuous operation", The 66th Annual Meeting of the Japan Society of Human Genetics (JSHG), Oral English Session, Yokohama Japan, October 14th, 2021
◦Akira Izumi, Mayumi Kamada, Ryosuke Kojima, Yasushi Okuno (2021) “Research on Secure computation techniques for integrated and secure analysis of genomic and Real World Data”, The 66th Annual Meeting of the Japan Society of Human Genetics (JSHG), Oral English Session, Yokohama Japan, October 14th, 2021.
◦中津井雅彦, 鎌田真由美 (2020) "日本人疾患バリアントデータベースMGeND", 第43回分子生物学会 企画フォーラム「ゲノム研究と医療をつなぐデータベース」, Online, 2020年12月
◦Mayumi Kamada, Rei Ashine, Masahiko Nakatsui, Ryosuke Kojima, Yasushi Okuno (2020) "MGeND: Database updates and detailed analysis", 日本人類遺伝学会第65回大会 Oral English Session19, Online, 2020年11月
◦鎌田真由美, 中津井雅彦 (2020) "日本人疾患バリアントデータベース MGeND紹介とデータ登録について", 2020年度ヒトバリアントデータ研究倫理勉強会, Online, 2020年10月
◦中津井雅彦, 鎌田真由美 (2019) "日本人疾患バリアントデータベース MGeND紹介とデータ登録について", 2019年度ヒトバリアントデータ研究倫理勉強会, 大阪, 2019年10月
◦ 鎌田真由美, 林田守広 (2015) “条件付き確率場を用いたタンパク質残基間コンタクト予測”, IPSJ SIG Technical Report, 2015-MPS-103, 数理モデル化と問題解決研究会, 沖縄, 2015 年 6 月
◦ 鎌田真由美, 佐久間裕介, 林田守広, 阿久津達也 (2014), “タンパク質ドメインの特徴を用いたカーネルマシンによるタンパク質間相互作用強度予測”, IPSJ SIG Technical Report, 2014-MPS-98, 数理モデル化と問題解決研究会, 沖縄, 2014 年 6 月
◦ 鎌田真由美, 長谷純崇, 木村啓太郎, 佐藤健吾, 豊田敦, 藤山秋佐夫, 榊原康文 (2014), “納豆菌ゲノムの PacBio シークエンシングと高精度配列の決定”, 第 8 回日本ゲノム微生物学会年会, 東京, 2014 年 3 月
◦ Mayumi Kamada, Morihiro Hayashida, Jiangning Song, Tatsuya Akutsu (2011), “Prediction of protein residue contacts using discriminative random field”, IPSJ SIG Technical Report, 2011-BIO-27(13), バイオ情報学研究会, 東京, 2011 年 12 月
◦ Mayumi Kamada, Mikito Toda, Morihiro Hayashida, Arturo Robertazzi, Ernst Walter Knapp, Tatsuya Akutsu (2011), “Exploring Feature Extraction Method for Time Series Data Obtained by Molecular Dynamics Simulation”, 第 49 回日本生物物理学会年会, 兵庫, 2011 年 9 月
◦ 鎌田真由美, 戸田幹人, 高田雅美, 城和貴 (2010), “タンパク質立体構の動きに着目した時系列解析”, IPSJ SIG Technical Report, 2010-BIO-20(5), バイオ情報学研究会, 石川, 2010 年 3 月
◦ 鎌田真由美, 仲嶋なつ, 石川千里, 高田雅美, 城和貴 (2007), “E-cell system を用いた酵母菌のグルカン合成に関するモデル構築”, IPSJ SIG Technical Report, 2007-BIO-11(128), バイオ情報学研究会, 東京, 2007 年 12 月
Poster
鎌田真由美, 芦根怜, 中津井雅彦, 奥野恭史 (2021) "日本人疾患バリアントデータベース MGeND", トーゴーの日シンポジウム 2021, Online, 2021年10月5日.
中津井雅彦, 芦根怜, 鎌田真由美, 小島諒介, 奥野恭史 (2020) "日本人疾患バリアントデータベースMGeNDアップデート", トーゴーの日2020, Online, 2020年10月
鎌田真由美, 中津井雅彦, 小島諒介, 奥野恭史 (2019) "日本人疾患ゲノム情報統合データベースMGeNDとキュレーション支援システム の開発", トーゴーの日2019, 東京, 2019年10月
バイオサイエンスデータベースセンター（片山俊明）, 京都大学大学院 医学研究科（鎌田真由美, 中津井雅彦）(2018) "日本人ゲノムの疾患関連変異と網羅的なリファレンスのデータベース整備および連携", 第4回クリニカルバイオバンク学会シンポジウム, 京都, 2018年7月
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◦Mayumi Kamada, Mikito Toda, Tatsuya Akutsu (2012), “Time-series analysis for protein dynamics using discrete wavelet transform with kernel canonical correlation analysis”, 第 50 回日本生物物理学会年会, 愛知, 2012 年 9 月
◦鎌田真由美, 戸田幹人, 林田守広, Arturo Robertazzi, Ernst Walter Knapp, 阿久津達也 (2011), “タンパク質の動きを用いた時系列解析手法開発”, 生命情報科学若手の会第 3 回研究会, 愛知, 2011 年 10 月
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