Mayank Golhar

About Me

Hello! नमस्कार! 您好! Bonjour! Hallo!

I'm a Ph.D. student at JHU BME. Previously, I completed my Masters in ECE from Johns Hopkins University. I am fortunate to be working with Dr. Nicholas Durr for my thesis.

My research interests lie at the intersection of fields of computer vision, machine learning, and optics, particularly their applications to the biomedical domain. My research involves improving the performance of deep learning models for datasets with small sizes or poor annotations. I'm also exploring the joint optimization of optical systems and AI algorithms for improved analysis of medical images.

Previously I worked as a Senior Software Engineer in the Medical Imaging Research Group, Healthcare & Medical Equipment division at Samsung Research Institute - Bangalore. I graduated from the Indian Institute of Technology (IIT) Guwahati in 2017 with a Bachelors in Electronics and Communications Engineering.

If I'm not tinkering with medical imaging algorithms, you can catch me playing volleyball or running on Baltimore streets.

As with life, this site is always a work in progress!

Research Interests

  • Computer Vision

  • Machine Learning

  • Deep learning

  • Biomedical Optics

  • Medical Image Analysis

  • Endoscopy

Education

Ph.D. Student, Johns Hopkins School of Medicine, 2021-Present

  • Biomedical Engineering

M.S.E., Johns Hopkins University, 2019-20

  • Electrical & Computer Engineering

B.Tech., Indian Institute of Technology Guwahati, 2013-17

  • Major : Electronics and Communication Engineering

  • Minor : Computer Science and Engineering

Research Experience

Research Assistant

Durr Lab, Johns Hopkins University, Baltimore, USA

Sept 19 - Present

Senior S/W Engineer

Medical Imaging Research Group, Samsung Research Institute, Bangalore, India

June 17 - Aug 19

Bachelor's Thesis

Image Processing and Computer Vision (IPCV) Laboratory, IIT Guwahati, India

July 16 - May 17

Research Intern

Computer Vision Laboratory (CVL), Chubu University, Japan

May 16 - July 16

Research Intern

Lab for Video and Image Analysis (LFOVIA), IIT Hyderabad, India

May 15 - July 15


Publications

Selected Works

Improving colonoscopy lesion classification using semi-supervised deep learning


MSE ThesisDr. Nicholas Durr, BME, Johns Hopkins UniversityDec 19 - Aug 20

Explored jigsaw puzzle solving based semi-supervised learning for polyp classification to improve performance by up to 9.8% using unlabeled data. Additionally, investigated semi-supervised learning’s advantages of domain adaptation, and out-of-distribution detection over purely supervised methods.

[Paper]

Addressing Computer Vision Challenges in Endoscopy Videos


B.Tech Thesis & Research Internship Project, Prof. M. K. Bhuyan, ECE, IIT Guwahati & Prof. Yuji Iwahori, CS, Chubu UniversityMay 16 - May 17
    • Blood vessel delineation in endoscopy videos : Improved the performance of vessel detection with Frangi Vesselness method by 8% using custom symmetry detection filtering and background removal.

    • Endoscopic Scene classification : Classification was done into 4 classes based blood vessel informationand dye content. A support vector machine was trained on features based on edge, colour and texture information for classification. Further, the accuracy was improved to 98.5% by using a ResNet inspired CNN.

    • 3D reconstruction of polyp : Used Structure from Motion & 3D Recurrent Reconstruction Neural Network for 3D shape recovery of polyp.

[Thesis]

Medical Image Analysis Algorithms for Cardiac & Musculoskeletal Ultrasound Images

Medical Imaging Research Group, Samsung Research Institute BangaloreJune-17 - Aug 19

Worked on the development of following algorithms:

  • Semi-automatic cardiac valve segmentation in 3D Ultrasound (US) Transesophageal echocardiography images.

  • Enhancement and optimization of Panoramic image stitching algorithm specific to Musculoskeletal (MSK) US images;

  • Motion Detection in US images.

Please have a look at my project page for other interesting projects & details!

Technical Skills

  • Programming Languages: C, C++, Python, C#

  • Libraries/Other Softwares: MATLAB, PyTorch, OpenCV

Contact

Email : firstname.lastname[at]gmail.com

Linkedin