Research
My research interests involve applications of probability and algebra to areas of mathematical biology, primarily evolution and phylogenetics. Some broad questions I am interested in:
What are the fundamental limits about what can be estimated about the history of life on earth?
For aspects of the evolutionary past that can be estimated, how much data is needed to do so accurately?
How well do particular estimation methods perform, both under standard assumptions of the evolutionary process, and when those assumptions are violated?
Papers and preprints
Semialgebraic conditions for identifying triangles in phylogenetic networks (preprint, link)
Methodological considerations for semialgebraic hypothesis testing with incomplete U-statistics (preprint, link)
Lower bounds on the sample complexity of species tree estimation when substitution rates vary across loci (link)
Maximum likelihood estimation for unrooted 3-leaf trees: an analytic solution for the CFN model (link)
A Maximum Likelihood Estimator for Quartets under the Cavender-Farris-Neyman model (link)
New directions in algebraic statistics: three challenges from 2023 (link)
Species tree estimation under joint modeling of coalescence and duplication: sample complexity of quartet methods (link)
Inconsistency of triplet-based and quartet-based species tree estimation under intralocus recombination (link)