GMFOLD: Subgraph matching for high-throughput DNA-aptamer secondary structure classification and machine learning interpretability - with P. Climaco, N. M. Mitchell, K. Yang, A. M. Andrews, and A. L. Bertozzi. Mathematical Biosciences 387, 109485, 2025. - (Link)
Machine learning techniques for frequency comb optimization - with M. Floridia, S. Wynn, J. Nitsche, B. Placke, J. Diab, M. S. Shariatdoust, S. Carbajo, P. Narang, and A. L. Bertozzi. Quantum sensing, Imaging, and Precision Metrology III 13392, 95-107, 2025. - (Link)
NMF regularization techniques for unmixing frequency comb data - with B. B. Connelly, A. Derderian, N. Faiaz, H. Tang, J. Diab, P. Narang, and A. L. Bertozzi. Quantum sensing, Imaging, and Precision Metrology IV 13920, 187-197, 2026. - (Link)
Boltzmann Graph Ensemble Embeddings for Aptamer Libraries - with S. Bauskar, J. Jiao, N. Kannan, A. Kimm, J. M. Baker, and A. L. Bertozzi - 2025. - (Link)
Robust Higher-Order Hamiltonian Engineering for Quantum Sensing with Strongly Interacting Systems- with H. Zhou, L. S. Martin, O. Makarova, N. Leitao, H. Park, and M. D. Lukin. Physical Review Letters 131 (22), 220803, 2023. - (Link)
Controlling local thermalization dynamics in a Floquet-engineered dipolar ensemble - with L. S. Martin, H. Zhou, N. T. Leitao, N. Maskara, O. Makarova, H. Gao, Q. Z. Zhu, M. Park, H. Park, S. Choi, M. D. Lukin. Physical Review Letters 130 (21) 210403, 2023. - (Link)
Higher-order methods for Hamiltonian engineering pulse sequence design - with H. Zhou, L.S. Martin, N. Leitao, M. D. Lukin. Physical Review A 108 (6) 062602, 2023. - (Link)