Publicaciones

Characterizing Bacterial Communities in Agroecosystems of the UNESCO Global Geopark Mixteca Alta, Oaxaca. 2024. Martínez-Núñez, M.A.; Orozco-Ramírez, Q. Agriculture, 14, 2180. https://doi.org/10.3390/agriculture14122180

Geographical distribution of mobile genetic elements in microbial communities along the Yucatan coast. 2024. Guillén-Chable F., Valdez Iuit J.O., Avila Castro L.A., Rosas C., Merino E., Rodríguez-Escamilla Z., Martínez-Núñez M.A. Plos one. 19(4): e0301642.

Insights into coastal microbial antibiotic resistome through a meta-transcriptomic approach in Yucatan. 2022. Guillén-Chable F., Rodríguez-Escamilla Z., Martínez-Núñez M.A. Frontiers in Microbiology. 13.

Pseudocrossidium replicatum (Taylor) R.H. Zander is a fully desiccation-tolerant moss that expresses an inducible molecular mechanism in response to severe abiotic stress. 2021. Selma Ríos-Meléndez, Emmanuel Valadez-Hernández, Claudio Delgadillo, Maria L Luna-Guevara, Martínez-Núñez M.A., Mishael Sánchez-Pérez, José L Martínez-y-Pérez, Analilia Arroyo-Becerra, Luis Cárdenas, Martha Bibbins-Martínez, Ignacio E Maldonado-Mendoza, Miguel Angel Villalobos-López. Plant Molecular Biology. 107: 387-404.

Identification of Novel Conotoxin Precursors from the Cone Snail Conus spurius by High-Throughput RNA Sequencing. 2021. Zamora-Bustillos R., Martínez-Núñez M.A., Manuel B. Aguilar, Reyna Cristina Colli-Dula, Diego Alfredo Brito-Domínguez. Marine Drugs (Basel). 19.

Comparative genomics of DNA-binding transcription factors in archaeal and bacterial organisms. 2021. Luis Martinez-Liu, Rafael Hernandez-Guerrero, Nancy Rivera-Gomez, Martínez-Núñez M.A., Pedro Escobar-Turriza, Eveline Peeters, Ernesto Perez-Rueda. Plos one. 16(7): e0254025.

Comparing sediment microbiomes in contaminated and pristine wetlands along the coast of Yucatan. 2021. Navarrete-Euan H., Rodriguez-Escamilla Z., Perez-Rueda E., Escalante-Herrera K., Martínez-Núñez M.A. Microorganisms (Basel). 9(4).

Voices of biotech research. 2021. Nasim Annabi, Matthew Baker, Alistair Boettiger, Debojyoti Chakraborty, Yvonne Chen, Kizzmekia S Corbett, Bruno Correia, James Dahlman, Tulio de Oliveira, Ali Ertuerk, Mehmet Fatih Yanik, Elizabeth Henaff, Meritxell Huch, Iliyan D Iliev, Thomas B Jacobs, Howard Junca, Albert Keung, Ilana Kolodkin-Gal, Smita Krishnaswamy, Madeline Lancaster, Evan Macosko, Martínez-Núñez M.A., Kyoko Miura, Jenny Molloy, Andrés Ochoa Cruz, Randall J Platt, Avery D Posey, Huilin Shao, Mijo Simunovic, Nikolai Slavov, Takanori Takebe, Luk H Vandenberghe, Rajeev K Varshney, Jianbin Wang. Nature biotechnology. 39(3).

Mining the Yucatan Coastal Microbiome for the Identification of Non-Ribosomal Peptides Synthetase (NRPS) Genes. 2020. Martínez-Núñez M.A., Rodriguez-Escamilla Z. Toxins (Basel). 12(6).

Genome-wide association study reveals candidate genes for litter size traits in pelibuey sheep. 2020. Hernández-Montiel, W., Martínez-Núñez M.A., Julio Porfirio Ramon-Ugalde, Sergio Iván Roman-Ponce, Rene Calderon-Chagoya, Roberto Zamora-Bustillos. Animals (Basel). 10(3).

Evaluation of the Abundance of DNA-Binding Transcription Factors in Prokaryotes. 2020. Israel Sanchez, Rafael Hernandez Guerrero, Paul Erick Mendez-Monroy, Martínez-Núñez M.A., Ibarra J.A., Perez-Rueda E. Genes (Basel). 11(52).

New Strategies to Discover Non-Ribosomal Peptides as a Source of Antibiotics Molecules. 2019. Martínez-Núñez M.A., Rodríguez-Escamilla Z., Lopez y Lopez V. Pharmaceutical Biocatalysis: Chemoenzymatic Synthesis of Active Pharmaceutical Ingredients. Vol 5. Pp. 701-721. CRC Press.

RNA-seq Transcriptome Analysis in Ovarian Tissue of Pelibuey Breed to Explore the Regulation of Prolificacy. 2019. Hernandez-Montiel W., Colli-Dula R.C., Ramón-Ugalde J.P., Martínez-Núñez M.A., Zamora-Bustillos R. Genes (Basel). 10(5).

Complete Genome Sequence of Houston Virus, a Newly Discovered Mosquito-Specific Virus, Isolated from Culex quinquefasciatus in Mexico. 2018. Nohemi Cigarroa-Toledo, Carlos M. Baak-Baak, Rosa C. Cetina-Trejo, Carlos Cordova-Fletes, Martínez-Núñez M.A., Lourdes G. Talavera-Aguilar, Julian G. Garcia-Rejon, Oswaldo M. Torres-Chable, Gerardo Suzan, Bradley J. Blitvich, Carlos I. Machain Williams. Microbiology Resource Announcements. 7(10).

Abundance, diversity and domain architecture variability in prokaryotic DNA-binding transcription factors. 2018. Perez-Rueda E., Hernandez-Guerrero R., Martínez-Núñez M.A., Dagoberto Armenta-Medina, Israel Sanchez, J Antonio Ibarra. PloS one. 13(4): e0195332.

Dissecting the repertoire of DNA-binding Transcription Factors of the archaeon Pyrococcus furiosus DSM 3638. 2018. Denis A., Martínez-Núñez M.A., Tenorio-Salgado S., Perez-Rueda E. Life (Basel). 8(4).

Functional prediction of hypothetical transcription factors of Escherichia coli K-12 based on expression data. 2017. Emanuel Flores-Bautista, Carenne Ludeña Cronick, Anny Rodriguez Fersaca,Martínez-Núñez M.A., Perez-Rueda E. Computational and Structural Biotechnology Journal. 16: 157-166.

Tracing the Repertoire of Promiscuous Enzymes along the Metabolic Pathways in Archaeal Organisms. 2017. Martínez-Núñez M.A. Rodríguez-Escamilla Z, Katya Rodriguez-Vazquez, Ernesto Perez-Rueda. Life (Basel). 7(3).

Dissecting the Protein Architecture of DNA-Binding Transcription Factors in Bacteria and Archaea. 2017. Nancy Rivera-Gomez, Martínez-Núñez M.A. Nina Pastor, Katya Rodriguez-Vazquez, Ernesto Perez-Rueda. Microbiology. 163(8).

Epigenetics knocks on synthetic biology's door. 2016. Rodríguez-Escamilla Z. Martínez-Núñez M.A., Merino E. FEMS Microbiology Letters. 363(17). Editor's Choice.

Nonribosomal peptides synthetases and their applications in industry. 2016. Martínez-Núñez M.A., López y López VE. Sustainable Chemical Processes. 4(13).

Do lifestyles influence the presence of promiscuous enzymes in bacteria and Archaea metabolism? 2016. Martínez-Núñez M.A., Pérez-Rueda E. Sustainable Chemical Processes 4(3).

The lifestyle of prokaryotic organisms influences the repertoire of promiscuous enzymes. 2015. Martínez-Núñez M.A., Rodríguez-Vázquez K. Pérez-Rueda E. Proteins: Structure, Function, and Bioinformatics. 83(9): 1625–1631.

Lessons from the modular organization of the transcriptional regulatory network of Bacillus subtilis. 2013. Freyre-Gonzalez JA. Manjarrez-Casas AM. Merino E. Martínez-Núñez M.A., Pérez-Rueda E. Gutierrez-Rios RM. BMC systems biology. 7(127).

Increments and duplication events of enzymes and transcription factors influence metabolic and regulatory diversity in prokaryotes. 2013. Martínez-Núñez M.A., Poot-Hernandez AC. Rodríguez-Vázquez K. Pérez-Rueda E. PloS One. 8(7).

The repertoire of DNA-binding transcription factors in prokaryotes: functional and evolutionary lessons. 2012. Pérez-Rueda E. Martínez-Núñez M.A. Science progress. 95(3).

Evolution of DNA-binding Transcription Factors and Regulatory Networks in Prokaryotes. 2012. Pérez-Rueda E. Rivera-Gomez N. Martínez-Núñez M.A., Tenorio-Salgado S. Bacterial Regulatory Networks. Horizon Scientific Press.

New insights into the regulatory networks of paralogous genes in bacteria. 2010. Martínez-Núñez M.A., Pérez-Rueda E. Gutierrez-Rios RM. Merino E. Microbiology. 156(1): 14-22.

Analysis of some phenotypic traits of feces-borne temperate lambdoid bacteriophages from different immunity groups: a high incidence of cor+, FhuA-dependent phages. 2008. Hernandez-Sanchez J. Bautista-Santos A. Fernandez L. Bermudez-Cruz RM. Uc-Mass A. Martinez-Peñafiel E. Martínez M.A., Garcia-Mena J. Guarneros G. Kameyama L. Archives of virology. 153(7): 1271-1280.