Conference Publications
Cornelis, L., Bernárdez, G., Jeong, H., Miolane, N. 2026. “When Machine Learning Gets Personal: Evaluating Prediction and Explanation.” || In Proceedings of the Fourteenth International Conference on Learning Representations (ICLR) (2026)
Bernárdez, G., Telyatnikov, L., Papillon, M., Montagna, M., Theiler, R., Cornelis, L., Mathe, J., . . . , Jardin, A., Emerson, T., Fink, O., Miolane, N. 2026. "Topological Deep Learning Challenge 2025: Expanding the Data Landscape" || In Proceedings of 1st Topology, Algebra, and Geometry in Data Science (TAG-DS) Conference.
Journal Publications
Cornelis, L.*, Papillon, M.*, Sanborn, S.*, Mathe, J.*, Buracas, D., Lillemark, H.J., Shewmake, C., Bertics, A., Pennec, X. and Miolane, N., 2024. "Beyond Euclid: An Illustrated Guide to Modern Machine Learning with Geometric, Topological, and Algebraic Structures." || IOP Science Machine Learning Science and Technology. 6.031002 (2025). [Paper]
Saloner, R., Casaletto, K., Rayaprolu, S., Cornelis, L., Chakrabarty, P., Abisambra, J., Spina, S. Grinberg, L., Seeley, W., Miller, B., Kramer, J., Rabinovici, G., Asken, B. 2025. Interrogating the plasma proteome of repetitive head impact exposure and chronic traumatic encephalopathy. Molecular Neurodegeneration, 20, 71. [Paper]
Under Review
Cornelis, L.*, Mathe, J*., Bernárdez, G., Miolane, N. 2026. "OgBench: Benchmarking Graph Neural Networks on Omics Data." || Under review at ICML 2026. [Project Homepage]
Wood, M., Rabin, J., Canuca, M., Iadipaolo, A., Cornelis, L., Miolane, N., Pham, A., Borger, J. Diaz, V., Paolillo, E., Kramer, J., Pritschet, L., Taylor, C., Panizzon, M., Reyes, R., Denkinger, M., Ashton, N., Johnson, S., Jacobs, E., Saloner, R. 2026. "Blood-based proteomic signatures of spontaneous menopause: Implications for later-life brain aging and Alzheimer’s disease risk." || Under review at Nature Medicine.
In Progress
Cornelis, L., Bernárdez, G., Casaletto, K., Papillon, M., Saloner, R.*, Miolane, N.* 2026. "Machine learning pipeline for proteomic discovery in frontotemporal dementia progression." || In progress.
Bernárdez, G., Van Langendonck, L., Cornelis, L., Papillon, M., Montagna, M., Miolane, N., Telyatnikov, L. 2026. "HOPSE: Scalable higher-order positional and structural encoder for combinatorial representations." || In progress.