Joseph Cummings

I am a postdoc at the University of Notre Dame working with Jonathan Hauenstein. My research interests are in applied algebraic geometry, algebraic statistics, and phylogenetics.

I received my PhD from the University of Kentucky in 2022, and I graduated with a BS in mathematics from the University of Kansas in 2016. 

Publications

Invariants for level-1 phylogenetic networks under the Cavendar-Farris-Neyman Model (with Benjamin Hollering and Chris Manon) (to appear in Advances in Applied Mathematics)

https://arxiv.org/abs/2102.03431


Generalized Cut Polytopes for Binary Hierarchical Models (with Jane Coons, Benjamin Hollering, and Aida Maraj)  (to appear in Algebraic Statistics)

https://arxiv.org/abs/2008.00043


A Fano compactification of the SL_2(C) free group character variety (with Chris Manon) (to appear in Geometriae Dedicata)

https://arxiv.org/abs/2209.02766

Pre-prints

The Pfaffian Structure of CFN Phylogenetic Invariants (with Benjamin Hollering, Elizabeth Gross, Samuel Martin, and Ikenna Nometa)

https://arxiv.org/abs/2312.07450

Computing Implicitizations of Multi-Graded Polynomial Maps (with Benjamin Hollering)

https://arxiv.org/abs/2311.07678


Multi-graded Macaulay Dual Spaces (with Jonathan Hauenstein)

https://arxiv.org/abs/2310.11587


The well-poised property and torus quotients (with Chris Manon)

https://arxiv.org/abs/2009.09105


Presentations

You can find my talk at the CodEx Seminar about phylogenetic networks from 6/1/21 at this link! Here are some of my other presentations.

Conferences

Teaching