Softwares

• Mechanistic Dynamic Model of Growth and Central Carbon Metabolism of Suspension AGE1.HN Cells  implementation in MATLAB

(Demo 1, ODEs, 33 states, MATLAB)

• Mechanistic Dynamic Model of Growth, Central Carbon Metabolism and Influenza A Virus Production in Suspension MDCK Cells  implementation in MATLAB

(Demo 2, ODEs, 35 states, MATLAB)

• CHO hybrid semi-parametric flux balance analysis (HybridFBA) implementation code and toy example in MATLAB

(Demo 3, constraint-based model, MATLAB)

• SBML2HYB implementation in Python and examples

(Demo 4, SBML to hybrid model, Python)

• HYBMOD toolbox for hybrid modeling

(Demo 5, SBML to hybrid model, MATLAB)

• HYBMOD toolbox for hybrid modeling of bioreactor experiments

(Demo 6, hybrid modeling using neural networks and first principle equations, MATLAB)

• HYBMOD toolbox for hybrid modeling of bioreactor using LSTM

(Demo 7, hybrid modeling using neural networks and first principle equations, MATLAB)