Protein Structural Analysis

Studying atomic structures of proteins is crucially important to understand and control their functions and to develop new drugs. We have developed a method to estimate chemical and physical quantities of proteins by applying TDA to the structural data obtained from PDB (Protein Data Bank).

literature

• M. Gameiro, Y. Hiraoka, S. Izumi, M. Kramar, K. Mischaikow, and V. Nanda, TopologicalMeasurement of Protein Compressibility via Persistent Diagrams, Japan J. Indust. Appl.Math., Vol. 32 (2015), 1-17.