Software

Open software

1. MSCquartets: Analyzing Gene Tree Quartets under the Multi-species Coalescent. Joint with E. Allman, J. Mitchell, J.A. Rhodes.
   R package - CRAN download. 

R shiny app to explore the package functions:  https://hector-banos.shinyapps.io/MSCq/

2. MEOW: An extension of MAMMaL (Susko, 2022). MAMMaL is a program designed to create a list of estimated frequency classes, each containing relative frequency values of amino acid types, as described in Susko, Lincker, and Roger (2018). MEOW aims to expand upon the core functionality of MAMMaL by providing a wider range of options on how to process sequence alignments. Joint with  A. Roger,  E. Susko,  R. Harada, K. Williamson.
   Available at GitHub.
   
   

3. MSCsimtester: Testing Multispecies Coalescent Simulators using Summary Statistics. Joint with E. Allman and J.A.Rhodes.
   R package - CRAN download.