Two-step "Proxy" Omics Prediction

A two-step phenotype prediction framework integrating genomic, microbiome, and metabolome data, leveraging nonlinear modeling. Published in Theoretical and Applied Genetics (Springer).

Ridge Redundancy Analysis for High-Dimensional Omics Data

The model handles the relationship of two omics matrices by incorporating ridge regression and dimensionality reduction. The article is available on bioRxiv. The R package 'rrda' is available on CRAN and GitHub. 

Interpretable Nonlinear Plant-Microbe Network

A machine Learning approach for elucidating plant-microbe interaction through multi-omics data. The article has been published in BMC Environmental Microbiome

Reciprocal BLUP

A variable selection approach for multi-omics data by reciprocal BLUP modeling. The article is published in Plants.

Plant Protein Monitoring System

I have a bachelor's and master's degree in plant molecular biology. I developed a monitoring system using luciferase fusion protein for elucidating rice photoperiodic flowering. Published in Frontiers in Plant Science.