Embedded Files
Spinning disk confocal microscopy with a 25 megapixel camera
Spinning disk confocal microscopy with a 25 megapixel camera
Guy M. Hagen, Brian Lewis, Summer Levis, Joseph R. Hamilton, Tristan C. Paul
Improving optical sectioning with spinning disk structured illumination microscopy
Improving optical sectioning with spinning disk structured illumination microscopy
Tristan C. Paul, Guy M. Hagen
Super-resolution imaging of neuronal structures with structured illumination microscopy
Super-resolution imaging of neuronal structures with structured illumination microscopy
Flexible multiplane structured illumination microscope with a four-camera detector
Flexible multiplane structured illumination microscope with a four-camera detector
Karl A. Johnson, Daniel Noble, Rosa Machado, Tristan C. Paul, Guy M. Hagen
Part of the Special Issue: Advances and Application of Super-resolution Optical Microscopy
Fluorescence microscopy datasets for training deep neural networks
Fluorescence microscopy datasets for training deep neural networks
Guy M. Hagen, Justin Bendesky, Rosa Machado, TA Nguyen, T. Kumar, Jonathan Ventura
All of the Raw and analyzed data is freely available on the Giga-Database!
Artifact-free whole-slide imaging with structured illumination microscopy and Bayesian image reconstruction
Artifact-free whole-slide imaging with structured illumination microscopy and Bayesian image reconstruction
Karl Johnson, Guy M. Hagen
All of the Raw and analyzed data is freely available on the Giga-Database!
View the huge images with this awesome Interactive panorama viewer!
Self-supervised poisson-gaussian denoising
Self-supervised poisson-gaussian denoising
W. Khademi, S. Rao, C. Minnerath, Guy M. Hagen, Jonathan Ventura
IEEE/CVF Winter Conference on Applications of Computer Vision 2021
Optical Imaging of Magnetic Particle Cluster Oscillation and Rotation in Glycerol
Optical Imaging of Magnetic Particle Cluster Oscillation and Rotation in Glycerol
River Gassen, Dennis Thompkins, Austin Routt, Philippe Jones, Meghan Smith, William Thompson, Paul Couture, Dmytro A. Bozhko, Zbigniew Celinski, Robert E. Camley, Guy M. Hagen, Kathrin Spendier
Fast Switching Dual-Frequency Nematic Liquid Crystal Tunable Filters
Fast Switching Dual-Frequency Nematic Liquid Crystal Tunable Filters
Olha Melnyk, Reed Jones, Rair Macêdo, Yuriy Garbovskiy, Guy Hagen, Anatoliy V Glushchenko, Kathrin Spendier, Robert E Camley
Optimization of laser deposited silver nanoparticle substrates for surface-enhanced Raman spectroscopy
Optimization of laser deposited silver nanoparticle substrates for surface-enhanced Raman spectroscopy
Tristan C Paul, Guy M Hagen, Anatoliy O Pinchuk, Kelly L McNear
Imaging Membrane Curvature inside a FcεRI-Centric Synapse in RBL-2H3 Cells Using TIRF Microscopy with Polarized Excitation
Imaging Membrane Curvature inside a FcεRI-Centric Synapse in RBL-2H3 Cells Using TIRF Microscopy with Polarized Excitation
Rosa Machado, Justin Bendesky, Madison Brown, Kathrin Spendier, Guy M Hagen
Super-resolution fight club: assessment of 2D and 3D single-molecule localization microscopy software
Super-resolution fight club: assessment of 2D and 3D single-molecule localization microscopy software
Daniel Sage, Thanh-An Pham, Hazen Babcock, Tomas Lukes, Thomas Pengo, Jerry Chao, Ramraj Velmurugan, Alex Herbert, Anurag Agrawal, Silvia Colabrese, Ann Wheeler, Anna Archetti, Bernd Rieger, Raimund Ober, Guy M. Hagen, Jean-Baptiste Sibarita, Jonas Ries, Ricardo Henriques, Michael Unser, Saemus Holden
Imaging tissues and cells beyond the diffraction limit with structured illumination microscopy and Bayesian image reconstruction
Imaging tissues and cells beyond the diffraction limit with structured illumination microscopy and Bayesian image reconstruction
Jakub Pospíšil, Tomáš Lukeš, Justin Bendesky, Karel Fliegel, Kathrin Spendier, Guy M Hagen
All of the Raw and analyzed data is freely available on the Giga-Database!
Quantitative super-resolution single molecule microscopy of YFP-tagged growth factor receptors
Quantitative super-resolution single molecule microscopy of YFP-tagged growth factor receptors
Tomáš Lukeš, Jakub Pospíšil, Karel Fliegel, Theo Lasser, Guy M Hagen
All of the Raw and analyzed data is freely available on the Giga-Database!
PALM/STORM microscopy with a dual objective microscope
PALM/STORM microscopy with a dual objective microscope
Zdeněk Švindrych, Martin Ovesný, Guy M. Hagen
Microscopy and imaging science: practical approaches to applied research and education, 2017
Image analysis for single-molecule localization microscopy
Image analysis for single-molecule localization microscopy
Martin Ovesný, Pavel Křížek, Josef Borkovec, Zdeněk Švindrych, Guy M. Hagen
Imaging of Biological Cells Using Luminescent Silver Nanoparticles
Imaging of Biological Cells Using Luminescent Silver Nanoparticles
Vira Kravets, Zamavang Almemar, Ke Jiang, Kyle Culhane, Rosa Machado, Guy M. Hagen, Andriy Kotko, Igor Dmytruk, Kathrin Spendier, Anatoliy Pinchuk
SIMToolbox: a MATLAB toolbox for structured illumination fluorescence microscopy
SIMToolbox: a MATLAB toolbox for structured illumination fluorescence microscopy
Pavel Křížek, Tomáš Lukeš, Martin Ovesný, Karel Fliegel, Guy M. Hagen
SimToolbox homepage with open-source code
ThunderSTORM: a comprehensive ImageJ plug-in for PALM and STORM data analysis and super-resolution imaging
ThunderSTORM: a comprehensive ImageJ plug-in for PALM and STORM data analysis and super-resolution imaging
Martin Ovesný Pavel Křížek Josef Borkovec Zdeněk Švindrych Guy M. Hagen
ThunderSTORM presentation on YouTube
ThunderSTORM presentation on YouTube
SMLMS conference at EPFL, Switzerland, 2016
A benchmark for comparison of cell tracking algorithms
A benchmark for comparison of cell tracking algorithms
Martin Maška, Vladimír Ulman, David Svoboda, Pavel Matula, Petr Matula, Cristina Ederra, Ainhoa Urbiola, Tomás España, Subramanian Venkatesan, Deepak M.W. Balak, Pavel Karas, Tereza Bolcková, Markéta Štreitová, Craig Carthel, Stefano Coraluppi, Nathalie Harder, Karl Rohr, Klas E. G. Magnusson, Joakim Jaldén, Helen M. Blau, Oleh Dzyubachyk, Pavel Křížek, Guy M. Hagen, David Pastor-Escuredo, Daniel Jimenez-Carretero, Maria J. Ledesma-Carbayo, Arrate Muñoz-Barrutia, Erik Meijering, Michal Kozubek, Carlos Ortiz-de-Solorzano
Three-dimensional super-resolution structured illumination microscopy with maximum a posteriori probability image estimation
Three-dimensional super-resolution structured illumination microscopy with maximum a posteriori probability image estimation
Tomáš Lukeš, Pavel Křížek, Zdeněk Švindrych, Jakub Benda, Martin Ovesný, Karel Fliegel, Miloš Klíma, Guy M. Hagen
High density 3D localization microscopy using sparse support recovery
High density 3D localization microscopy using sparse support recovery
Martin Ovesný, Pavel Křížek, Zdeněk Švindrych, Guy M. Hagen
Imaging of insulin receptors in the plasma membrane of cells using super-resolution single molecule localization microscopy
Imaging of insulin receptors in the plasma membrane of cells using super-resolution single molecule localization microscopy
Pavel Křížek, Peter W. Winter, Zdeněk Švindrych, Josef Borkovec, Martin Ovesný, Deborah A. Roess, B. George Barisas, Guy M. Hagen
Microscopy: advances in scientific research and education, 2014
Separation of replication and transcription domains in nucleoli
Separation of replication and transcription domains in nucleoli
E Smirnov, J Borkovec, L Kováčik, S Svidenska, A Schröfel, M Skalnikova, Z Švindrych, P Křížek, M Ovesný, G M Hagen, P Juda, K Michalová, MC Cardoso, D Cmarko, I Raška
Comparison of image reconstruction methods for structured illumination microscopy
Comparison of image reconstruction methods for structured illumination microscopy
Tomáš Lukeš, Guy M. Hagen, Pavel Křížek, Zdeněk Švindrych, Karel Fliegel, Miloš Klíma
Flexible structured illumination microscope with a programmable illumination array
Flexible structured illumination microscope with a programmable illumination array
Pavel Křížek, Ivan Raška, Guy M. Hagen
Minimizing detection errors in single molecule localization microscopy
Minimizing detection errors in single molecule localization microscopy
Pavel Křížek, Ivan Raška, Guy M. Hagen
Spatial light modulators in fluorescence microscopy
Spatial light modulators in fluorescence microscopy
Pavel Křížek, Guy M. Hagen
Microscopy: Science, Technology, Applications and Education, 2010
Specific Visualization of Glioma Cells in Living Low-Grade Tumor Tissue
Specific Visualization of Glioma Cells in Living Low-Grade Tumor Tissue
Sven R. Kantelhardt, Wouter Caarls, Anthony H. B. de Vries, Guy M. Hagen, Thomas M. Jovin, Walter Schulz-Schaeffer, Veit Rohde, Alf Giese, Donna J. Arndt-Jovin
Fluorescence recovery after photobleaching and photoconversion in multiple arbitrary regions of interest using a programmable array microscope
Fluorescence recovery after photobleaching and photoconversion in multiple arbitrary regions of interest using a programmable array microscope
Guy M Hagen, Wouter Caarls, Keith A Lidke, Anthony HB De Vries, Cornelia Fritsch, B George Barisas, Donna J Arndt‐Jovin, Thomas M Jovin
Dynamics of Membrane Receptors: Single‐molecule Tracking of Quantum Dot Liganded Epidermal Growth Factor
Dynamics of Membrane Receptors: Single‐molecule Tracking of Quantum Dot Liganded Epidermal Growth Factor
Guy M Hagen, Keith A Lidke, Bernd Rieger, Diane S Lidke, Wouter Caarls, Donna J Arndt‐Jovin, Thomas M Jovin
Biological applications of an LCoS-based programmable array microscope (PAM)
Biological applications of an LCoS-based programmable array microscope (PAM)
Guy M. Hagen, Wouter Caarls, MartinThomas, Andrew Hill, Keith A. Lidke, Bernd Rieger, Cornelia Fritsch, Bert van Geest, Thomas M Jovin and Donna J. Arndt-Jovin
Spectroscopic modulation of multifunctionalized quantum dots for use as biological probes and effectors
Spectroscopic modulation of multifunctionalized quantum dots for use as biological probes and effectors
Sandra Miskoski, Luciana Giordano, Maria H. Etchehon, Guillermo Menendez, Keith A. Lidke,
Guy M. Hagen, Thomas M. Jovin, Elizabeth A. Jares-Erijman
Compartmentalization of the Type I Fcε receptor and MAFA on mast cell membranes
Compartmentalization of the Type I Fcε receptor and MAFA on mast cell membranes
B George Barisas, Steven M Smith, Jingjing Liu, Jinming Song, Guy M Hagen, Israel Pecht, Deborah A Roess
Fluorescence photobleaching recovery using total internal reflection interference fringes
Fluorescence photobleaching recovery using total internal reflection interference fringes
Luteinizing Hormone Receptors Translocate to Plasma Membrane Microdomains after Binding of Human Chorionic Gonadotropin
Luteinizing Hormone Receptors Translocate to Plasma Membrane Microdomains after Binding of Human Chorionic Gonadotropin
Steven ML Smith, Ying Lei, Jingjing Liu, Mary E Cahill, Guy M Hagen, B George Barisas, Deborah A Roess
High Probe Intensity Photobleaching Measurement of Lateral Diffusion in Cell Membranes
High Probe Intensity Photobleaching Measurement of Lateral Diffusion in Cell Membranes
Guy M Hagen, Deborah A. Roess, Gildardo Cruz de León , B. George Barisas
Flexible normally on photomultiplier gating strategy for reducing postgate artifacts
Flexible normally on photomultiplier gating strategy for reducing postgate artifacts
Guy M Hagen, Guangzhong Gao, Deborah A Roess, B George Barisas
Lateral diffusion measurements on genetically introduced fluorescent proteins
Lateral diffusion measurements on genetically introduced fluorescent proteins
B George Barisas, Deborah A Roess, Gildardo Cruz de Leon, Guy M Hagen
The Mast Cell Function-Associated Antigen and Its Interactions with the Type I Fcε Receptor
The Mast Cell Function-Associated Antigen and Its Interactions with the Type I Fcε Receptor
Jinming Song, Guy M. Hagen, Deborah A. Roess, Israel Pecht, B. George Barisas
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