University Cursus
Bioinformatics Modeling-Cellular and molecular biology
Sorbonne University (Paris), Campus Pierre et Marie Curie.
2018-2020
Projects
Can dendrite-bound attentional signals modulate the activity of orientation selective neurons?
2022
Supervised by:
Konstantinos-Evangelos Petousakis
Collaboration with: Ballbé Julien / Calice Margaux / Cascino Federico / Hall Siobhan / Kurban Kerem / Raison-Aubry Laëtitia / Verardo Claudio
Description:
In this project, we are interested in modeling the attention process via L2/L3 type pyramidal cells.
The neurons will be studied individually and the importance of the structure of the neuron in the process will be studied.
Several important questions will be addressed: how to represent the visual type input entering the neuron?
How to represent the problem of attention to a stimulus? What are the important parameters to have a working model?
RENARDS-3D PROJECT: Recognition by Rank Alignment Notation by Definition of 3D Structures.
Basque Center for Applied Mathematics (Bilbao)
2019
Université Paris-Saclay (Paris) / Sorbonne Université (Paris)
Supervised by :
Elodie Laine. (Associate Professor in Computational Biology and Artificial Intelligence)
Anne Lopes (Associate Professor at Université Paris-Saclay)
Description:
Development of a sequence recognition program that returns all the possible 3D structures that a protein can take by forming a complex thanks to molecular fold. Presentation of the project during a symposium with a poster.
Skills
Modelling
Data Analysis
Point, population, microcircuit neuron models
Linear algebra, calculous
Bifurcation Analysis & Numerical Continuation
Slow-Fast decomposition
Model fitting based on data
Neural Networks and Machine learning
Big Data Analysis
Time Series Analysis
Statistical Analysis
Classification & Machine Learning
Dynamic Alignments
Reccurence Structure Analysis
Programming
Laboratory
Python / Cython / Jupyter Notebook
Matlab
C
Bash
R
Mathematica
Immunostaining
Western blot
Fluorescence Microscopy
Electrical Circuit
ELISA assay
Patch-Clamp