Journal Club
A non-canonical tricarboxylic acid cycle underlies cellular identity
Date : 2022.03.25 Presenter : Ingyu, Song Journal : Nature, 2022
Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets
Date : 2022.04.29 Presenter : Songwon, Lim Journal : Cell, 2015
Minimizing treatment-induced emergence of antibiotic resistance in bacterial infections
Date : 2022.04.29 Presenter : Jaewoo Baek Journal : Science, 2022
The gut microbial metabolite formate exacerbates colorectal cancer progression
Date : 2022.06.01 Presenter : Nayeon Park Journal : Nature Metabolism, 2022
Noninvasive assessment of gut function using transcriptional recording sentinel cells
Date : 2022.06.01 Presenter : Junwoo Jo Journal : Science, 2022
A pan-cancer metabolic atlas of the tumor microenvironment
Date : 2022.06.29 Presenter : Songwon Lim Journal : Cell Reports, 2022
Link : www.sciencedirect.com/science/article/pii/S2211124722005678?via%3Dihub%EC%9E%85%EB%8B%88%EB%8B%A4
The gut metabolite indole-3 propionate promotes nerve regeneration and repair
Date : 2022.07.12 Presenter : Youngchang Seo Journal : Nature, 2022
Enteric viruses replicate in salivary glands and infect through saliva
Date : 2022.07.12 Presenter : Minjun Kim Journal : Nature, 2022
Gut microbiome of multiple sclerosis patients and paired hosehold healthy controls reveal associations with disease risk and course
Date : 2022.10.18 Presenter : Minjun Kim Journal : Cell, 2022
Cancer cell states recur acorss tumor types and form specific interactions with the tumor microenvironment
Date : 2022.10.18 Presenter : Nayeon Park Journal : Nature Genetics, 2022
Gut bacterial nutrient preferences quantified in vivo
Date : 2022.11.16 Presenter : Youngchang Seo Journal : Cell, 2022
Link : https://www.cell.com/cell/pdf/S0092-8674(22)00923-0.pdf
Design of protein-binding proteins from the target structure alone
Date : 2022.11.16 Presenter : Jihun Jung Journal : Nature, 2022
Enterotypical Prevotella and three novel bacterial biomarkers in preoperative stool predict the clinical outcome of colorectal cancer
Date : 2022. 12.14 Presenter : Jaewoo Baek Journal : Microbiome, 2022
Link : https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-022-01388-8#Sec18
Personalized Genome-Scale Metabolic Models Identify Targets of Redox metabolism in Radiation-Resistant Tumors
Date : 2023. 01.17 Presenter : Songwon Lim Journal : Cell systems, 2020
Link : https://www.cell.com/cell-systems/fulltext/S2405-4712(20)30502-0
A spatially resolved atlas of the human lung characterizes a gland-associated immune niche
Date : 2023. 01.31 Presenter : Nayeon Park Journal : Nature Genetics, 2022
NAD precursors cycle between host tissues and the gut microbiome
Date : 2023. 03.20 Presenter : Ingyu Song Journal : Cell Metabolism, 2022
Link : https://www.cell.com/cell-metabolism/fulltext/S1550-4131(22)00495-8
ApoE isoform - and microbiota-dependent progression of neurodegeneration in a mouse model of tauopathy
Date : 2023. 03.20 Presenter : Minjun Kim Journal : Science, 2023
Personalized microbiome-driven effects of non-nutritive sweeteners on human glucose tolerance
Date : 2023. 04.24 Presenter : Jinwoo Choi Journal : Cell, 2022
Link : https://www.cell.com/cell/fulltext/S0092-8674(22)00919-9
Microbiota-derived 3-IAA influences chemotherapy efficacy in pancreatic cancer
Date : 2023. 04.24 Presenter : Youngchang Seo Journal : Nature, 2023
Cell-cell metabolite exchange creates a pro-survival metabolic environment that extends lifespan
Date : 2023. 07.06 Presenter : Songwon Lim Journal : Cell, 2023
Link : https://www.cell.com/cell/fulltext/S0092-8674(22)01520-3
Fatty acid overproduction by gut commensal microbiota exacerbates obesity
Date : 2023. 07.14 Presenter : Nayeon Park Journal : Cell Metabolism, 2023
Link : https://www.cell.com/cell-metabolism/fulltext/S1550-4131(22)00550-2
Gut microbiome composition may be an indicator of preclinical Alzheimer's disease
Date : 2023. 07.20 Presenter : Minjun Kim Journal : Science Translational Medicine, 2023
Link : https://www.science.org/doi/full/10.1126/scitranslmed.abo2984
A gut-derived metabolite alters brain activity and anxiety behaviour in mice
Date : 2023. 07.27 Presenter : Suyeon Lee Journal : Nature, 2022
Gut microbiome alterations in high-fat-diet-fed mice are associated with antibiotic tolerance
Date : 2023. 08.03 Presenter : Jaewoo Baek Journal : Nature microbiology, 2021
Parabacteroides distasonis uses dietary inulin to suppress NASH via its metabolite pentadecanoic acid
Date : 2023. 08.09 Presenter : Youngchang Seo Journal : Nature microbiology, 2023
A single-nucleotide polymorphism in Helicobacter pylori promotes gastric cancer development
Date : 2023. 08.17 Presenter : Junwoo Jo Journal : Cell Host & Microbe, 2023
Link : https://www.cell.com/cell-host-microbe/fulltext/S1931-3128(23)00267-6
Spatial host-microbiome sequencing reveals niches in the mouse gut
Date : 2023. 12.01 Presenter : Jaewoo Baek Journal : Nature Biotechnology, 2023
Link : https://www.nature.com/articles/s41587-023-01988-1#Sec2
Arrhythmic Gut Microbiome Signatures Predict Risk of Type 2 Diabetes
Date : 2024. 01.12 Presenter : Jaewoo Baek Journal : Cell Host & Microbe, 2020
Link : https://www.cell.com/cell-host-microbe/fulltext/S1931-3128(20)30343-7
Profiling the human intestinal environment under physiological conditions
Date : 2024. 01.26 Presenter : Hyeongjoon Ahn Journal : Nature, 2023
Link : https://www.nature.com/articles/s41586-023-05989-7#Fig1
Host genetic regulation of human gut microbial structural variation
Date : 2024. 02.02 Presenter : Suyeon Lee Journal : Nature, 2024
Metabolic Network Analysis Reveals Altered Bile Acid Synthesis and Metabolism in Alzheimer's Disease
Date : 2024. 02.08 Presenter : Nayeon Park Journal : Cell Reports, 2024
Link : https://www.cell.com/cell-reports-medicine/fulltext/S2666-3791(20)30182-8
Spatial metatranscriptomics resolves host-bacteria-fungi interactomes
Date : 2024. 02.23 Presenter : Songwon Lim Journal : Nature Biotechnology, 2024
Staphylococcal diversity in atopic dermatitis from an individual to a global scale
Date : 2024. 03.19 Presenter : Junwoo Jo Journal : Cell Host & Microbe, 2023
Link : https://www.cell.com/cell-host-microbe/fulltext/S1931-3128(23)00114-2
Bioactive glycans in a microbiome-directed food for children with malnutrition
Date : 2024. 03.19 Presenter : Youngchang Seo Journal : Nature, 2024
A reference map of potential determinants for the human serum metabolome
Date : 2024. 04.23 Presenter : Minseo Park Journal : Nature, 2020
A gut microbial signature for combination immune checkpoint blockade across cancer types
Date : 2024. 04.23 Presenter : Jaewoo Baek Journal : Nature Medicine, 2024
Link : https://www.nature.com/articles/s41591-024-02823-z#Sec2