Codes
Magnetic Resonance Imaging
The Brainweb simulated brain database is useful for obtaining realistic simulated data - http://brainweb.bic.mni.mcgill.ca/brainweb/
3D MRI Bayesian Denoising
The matlab script implementing the 3D MAP code for amplitude data can be downloaded by clicking on the icon. The method is described in the manuscript "A 3D MRI denoising algorithm based on Bayesian theory", BMC BEO. Please cite the paper if you use the code.
MRI Bayesian Denoising in Complex Domain
The matlab script implementing the MAP code for several complex 2D acquisitions can be downloaded by clicking on the icon. The method is described in the manuscript "Bayesian MRI denoising in complex domain", Elsevier MRI. Please cite the paper if you use the code.
Ultrasound
A nice simulator of US data is the Field II software available at: http://field-ii.dk/
wKSR-NLM Despeckling Filter
The code implements the algorithm described in the manuscript "wKSR-NLM: an Ultrasound Despeckling
Filter Based on Patch Ratio and Statistical Similarity", which has been submitted to IEEE ACCESS.
Magnetoencephalography
A complete and usefull Matlab toolbox for EEG and MEG processing is Fieldtrip, available here: http://www.fieldtriptoolbox.org/
Phase Linearity Measurement
The matlab script implementing the PLM code can be downloaded by clicking on the icon. The method is described in the manuscript "Phase Linearity Measurement: a novel index for brain functional connectivity", IEEE TMI. Please cite the paper if you use the code.
The matlab function has also been included in the Fieldtrip toolbox.
