Publications

Thommes, E.W., Mahmud, S.M., Young‐Xu, Y., Snider, J.T., van Aalst, R., Lee, J.K., Halchenko, Y., Russo, E. and Chit, A., 2020. Assessing the prior event rate ratio method via probabilistic bias analysis on a Bayesian network. Statistics in medicine, 39(5), pp.639-659. Link

Coudeville, L., Gomez, G.B., Jollivet, O., Harris, R.C., Thommes, E., Druelles, S., Chit, A., Chaves, S.S. and Mahé, C., 2020. Exploring uncertainty and risk in the accelerated response to a COVID-19 vaccine: Perspective from the pharmaceutical industry. Vaccine. Link

Humphrey, L., Thommes, E.W., Fields, R., Hakim, N., Chit, A. and Cojocaru, M.G., 2020. Testing, tracing and social distancing: Assessing options for the control of COVID-19. [PREPRINT] medRxiv. Link

Young-Xu, Y., Snider, J.T., Mahmud, S.M., Russo, E.M., Van Aalst, R., Thommes, E.W., Lee, J.K. and Chit, A., 2020. High-dose influenza vaccination and mortality among predominantly male, white, senior veterans, United States, 2012/13 to 2014/15. Eurosurveillance, 25(19), p.1900401. Link

Loiacono, M.M., Mahmud, S.M., Chit, A., van Aalst, R., Kwong, J.C., Mitsakakis, N., Skinner, L., Thommes, E., Bricout, H. and Grootendorst, P., 2020. Patient and practice level factors associated with seasonal influenza vaccine uptake among at-risk adults in England, 2011 to 2016: An age-stratified retrospective cohort study. Vaccine: X, 4, p.100054. Link

Hall, L.L., Xu, L., Mahmud, S.M., Puckrein, G.A., Thommes, E.W. and Chit, A., 2020. A map of racial and ethnic disparities in influenza vaccine uptake in the Medicare fee-for-service program. Advances in therapy, 37(5), p.2224. Link

van Aalst, R., Thommes, E., Postma, M., Chit, A. and Dahabreh, I.J., 2020. On the causal interpretation of rate-change methods: the prior event rate ratio and rate difference. American Journal of Epidemiology. Link

McCarthy, Zachary, et al. "Quantifying the annual incidence and underestimation of seasonal influenza: A modelling approach." Theoretical Biology and Medical Modelling 17.1 (2020): 1-16. Link

Young-Xu, Y., Snider, J.T., van Aalst, R., Mahmud, S.M., Thommes, E.W., Lee, J.K., Greenberg, D.P. and Chit, A., 2019. Analysis of relative effectiveness of high-dose versus standard-dose influenza vaccines using an instrumental variable method. Vaccine, 37(11), pp.1484-1490. Link

Young-Xu, Y., Van Aalst, R., Mahmud, S.M., Rothman, K.J., Snider, J.T., Westreich, D., Mor, V., Gravenstein, S., Lee, J.K., Thommes, E.W. and Decker, M.D., 2018. Relative vaccine effectiveness of high-dose versus standard-dose influenza vaccines among veterans health administration patients. The Journal of Infectious Diseases, 217(11), pp.1718-1727. Link

Thommes, E., Cojocaru, M.-G., Athar, S. 2015, Absenteeism impact on Local Economy during a Pandemic via Hybrid SIR dynamics, to appear in: Dynamics of Disasters Conference Proceedings, Springer.

Thommes, Ismaila, A., Meier, G. \& Bauch, C. 2015., Cost-effectiveness evaluation of quadrivalent influenza vaccines for seasonal influenza prevention: A dynamic modeling study of Canada and the United Kingdon, BMC Infectious Diseases

Thommes, Chit, A., Meier, G. \& Bauch, C. 2014. Examing Ontario's universal influenza immunization program with a multi-strain dynamic model. Vaccine 32, 5098.

Jayasundara, K., Soobiah, C., Thommes, Tricco, A. \& Chit, A. 2014. Natural attack rate of influenza in unvaccinated children and adults: A meta-regression analysis. {\it BMC Infectious Diseases} 14, 670.

Nguyen, S., Cojocaru, M.-G. \& Thommes, E. 2014. Personal efficiency in highway driving: An agent-based model of driving behavior from a system design viewpoint. In: IEEE 27th Canadian Conference on Electrical and Computer Engineering (CCECE), 1-6

Andrews, M., Thommes, E., Cojocaru, M.-G. 2014. Replicator Dynamics vs. Agent-based Models in Axelrod's Norm Games, in: Interdisciplinary Topics in Applied Mathematics, Modeling and Computer Science, ISBN: 978-3-319-12306-6, (c) 2015, Springer, PROMS Vol. 117.

Cojocaru, M.-G., Hogg, C., Kuusela, C., Thommes, E. 2014. Adoption of new products with global and local social influence in a 2-d characteristics space, in: Interdisciplinary Topics in Applied Mathematics, Modeling and Computer Science, ISBN: 978-3-319-12306-6, (c) 2015, Springer, PROMS Vol. 117.

Cojocaru, M.-G., H. Thille, E. Thommes, D. Nelson \& S. Greenhalgh 2013, Dynamics of social interaction and its effects on demand for eco-products, {\it Environmental Modelling and Software} 50, 169.

Thille, H., M.-G. Cojocaru \& E. Thommes, E, 2013, A Dynamic Pricing Game in a Model of New Product Adoption with Social Influence. In: 2013 ASE/IEEE International Conference on Economic Computing, 762-767.

Levison, H. F., Duncan, M. J. \& Thommes, E. W. 2012, A Lagrangian Integrator for Planetary Accretion and Dynamics (LIPAD), AJ 144.

Matsumura, S., Thommes, E. W., Chatterjee, S. \& Rasio, F. A. 2010., Unstable planetary systems emerging out of gas disks., ApJ 714, 194.

Levison, H. F., Thommes \& Duncan, M. J. 2010, Modeling the formation of giant planet cores. I. Evaluating key processes. AJ 139, 1297.

Cojocaru, M. G., S. Hawkins, H. Thille \& E. W. Thommes 2009. Double layer and hybrid dynamics of equilibrium problems: Applications to markets of environmental products, in: Nonlinear Analysis and Optimization (P. Pardalos, Th. Rassias, A. Khan Eds.), Springer-Verlag.

Thommes, E. W., Thille, H., Cojocaru, M. G., \& Nelson, D., 2009, A time-dependent agent-based model of an eco-product market with social interactions and dynamic game pricing schemes. In proceedings, Science and Technology for Humanity (TIC-STH), 2009 IEEE Toronto International Conference, 218.

Lee, M.-H. \& Thommes 2009, Planetary migration and eccentricity and inclination resonances in extrasolar planetary systems. ApJ 702, 1662.

Matsumura, S, Pudritz, R. E. \& Thommes 2009. The growth and migration of jovian planets in evolving protostellar disks with dead zones. ApJ 691, 1764.

Lee, A. T., Thommes \& Rasio, F. A. 2009. Resonance trapping in protoplanetary disks. I. Coplanar systems. ApJ 691, 1684.

Thommes, Matsumura, S. \& Rasio, F. A. 2008. Gas disks to gas giants: Simulating the birth of planetary systems. Science, 321, 814.

Thommes, Nagasawa, M. \& Lin, D. N. C. 2008. Dynamical shakeup of planetary systems II. N-body simulations of Solar System terrestrial planet formation induced by secular resonance sweeping. ApJ 675, 728

Thommes, Bryden, G., Wu, Y. \& Rasio, F. A. 2008. From mean-motion resonances to scattered planets: producing the Solar System, eccentric exoplanets and Late Heavy Bombardments. ApJ 675, 1538

Thommes 2007}. Terrestrial planet formation (Review article), in; Planetary Systems and the Origin of Life, R. Pudritz, P. Higgs \& J. Stone (eds.), Cambridge University Press.

Thommes, L. C. Nilsson \& N. Murray 2007. Overcoming migration during giant planet formation. ApJL 656, L25

Nagasawa, M., Thommes, E. W., Kenyon, S., Bromley, D. \& Lin, D.N.C. 2007. The diverse origins of terrestrial planet systems (Review article), in: Protostars \& Planets V, B. Reipurth, D. Jewitt \& K. Keil (eds.), The University of Arizona Press, 951

Matsumura, S., Pudritz, R. \& Thommes, E. W. 2007. Saving planetary systems: Dead zones and planetary migration. ApJ 660, 1609

E. W. Thommes \& N. Murray 2006. Giant planet accretion and migration: Surviving the type I regime. ApJ 644, 1214-1222.

Thommes, E. W. \& M. J. Duncan 2006. The accretion of giant planet cores. In: Planet formation: Theory, Observations and Experiments, H. Klahr \& W. Brandner (eds.). Cambridge University Press.

M. Nagasawa, D. N. C. Lin \& E. W. Thommes 2005. Dynamical shake-up of planetary systems. I. Embryo trapping and induced collisions by the sweeping secular resonance and embryo-disk tidal interaction. ApJ 635, 578-598.

Levin, Y., Wu, A. S. P. \& Thommes E. W., 2005. Intermediate-mass black hole and stellar orbits in the Galactic Center. ApJ 635, 341-348.

Thommes, E. W., 2005, A safety net for fast migrators: Interactions between gap-opening and sub-gap-opening bodies in a protoplanetary disk. ApJ 626, 1033-1044.

E. W. Thommes \& J. J. Lissauer, 2005. Planet Migration. In: Astrophysics of Life, Eds. M. Livio, N. Reid \& W. Sparks. Cambridge University Press

E. W. Thommes \& J. J. Lissauer 2003. Resonant inclination excitation of migrating giant planets. ApJ 597, 566-580.

E. W. Thommes, M. J. Duncan \& H. F Levison 2003, Oligarchic growth of giant planets. Icarus 161, 431-455.

Thommes, E. W. 2003. Large scattering events and the formation of planetary systems. In: Scientific Frontiers in Extrasolar Planets, ASP Conference Series Vol. 294, 315-318.

E. W. Thommes, M. J. Duncan and H. F. Levison 2002}. The formation of Uranus and Neptune among Jupiter and Saturn. AJ 123, 2862-2833.

Chiang, E. I., D. Fischer and E. W. Thommes 2002}, Excitation of orbital eccentricities of extrasolar planets by repeated resonance crossings. ApJ 564, L105-L109.

E. W. Thommes, M. J. Duncan and H. F. Levison 2001. Solar system formation timescales from oligarchic growth. In: Astrophysical Ages and Time Scales, ASP Conference Series Vol. 245, 91.

Thommes, E.W., Duncan, M.J. and Levison, H.F., 1999. The formation of Uranus and Neptune in the Jupiter–Saturn region of the Solar System. Nature, 402(6762), pp.635-638. Link