2025
Lee D, Shahandeh MP, Abuin L, Benton R. Comparative single-cell transcriptomic atlases of drosophilid brains suggest glial evolution during ecological adaptation. PLoS Biol. 2025;23(4):e3003120.
Link: https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.3003120
2024
Lee D, Lee BY, Choi MK, Kim N, Lee J. Role of gustatory neurons opposing TGF-beta in regulating nictation behavior in Caenorhabditis elegans. J Biosci. 2024;49:95.
Sohn J, Kwon S, Lee GY, Kim SS, Lee Y, Lee J, Jung Y, Ham S, Park HH, Park S, Ha SG, Lee D, Lee SV. HLH-30/TFEB mediates sexual dimorphism in immunity in Caenorhabditis elegans. Autophagy. 2024 Jul 20:1-15.
Yang H, Lee D, Kim H, Cook DE, Paik YK, Andersen EC, Lee J. Glial expression of a steroidogenic enzyme underlies natural variation in hitchhiking behavior. Proc Natl Acad Sci U S A. 2024 Jul 9;121(28):e2320796121.
2023
Lee D, Benton R. Comparative single-cell transcriptomic atlases reveal conserved and divergent features of drosophilid central brains. bioRxiv. 2023 Nov 23.
Lee D, Fox BW, Palomino DF, Panda O, Tenjo FJ, Koury EJ, Evans KS, Stevens L, Rodrigues PR, Kolodziej AR, Schroeder FC, Andersen EC. Natural genetic variation in the pheromone production of C. elegans. Proc Natl Acad Sci U S A. 2023 Jun 27;120(26):e2221150120.
Lim DS, Kim J, Kim W, Kim N, Lee SH, Lee D, Lee J. daf-42 is an evolutionarily young gene essential for dauer development in Caenorhabditis elegans. Genetics. 2023 May 22:iyad097
2022
Zhang G, Roberto NM, Lee D, Hahnel SR, Andersen EC. The impact of species-wide gene expression variation on Caenorhabditis elegans complex traits. Nat Commun. 2022 Jun 16;13(1):3462.
Crombie TA, Battlay P, Tanny RE, Evans KS, Buchanan CM, Cook DE, Dilks CM, Stinson LA, Zdraljevic S, Zhang G, Roberto NM, Lee D, Ailion M, Hodgins KA, Andersen EC. Local adaptation and spatiotemporal patterns of genetic diversity revealed by repeated sampling of Caenorhabditis elegans across the Hawaiian Islands. Mol Ecol. 2022 Apr;31(8):2327-2347.
DOI: 10.1111/mec.16400
2021
Lee D, Zdraljevic S, Stevens L, Wang Y, Tanny RE, Crombie TA, Cook DE, Webster AK, Chirakar R, Baugh LR, Sterken MG, Braendle C, Félix MA, Rockman MV, Andersen EC. Balancing selection maintains hyper-divergent haplotypes in Caenorhabditis elegans. Nat Ecol Evol. 2021 Jun;5(6):794-807.
2020
Cho B, Yoon SH, Lee D, Koranteng F, Tattikota SG, Cha N, Shin M, Do H, Hu Y, Oh SY, Lee D, Vipin Menon A, Moon SJ, Perrimon N, Nam JW, Shim J. Single-cell transcriptome maps of myeloid blood cell lineages in Drosophila. Nat Commun. 2020 Sep 8;11(1):4483.
Zhao Y, Long L, Wan J, Biliya S, Brady SC, Lee D, Ojemakinde A, Andersen EC, Vannberg FO, Lu H, McGrath PT. A spontaneous complex structural variant in rcan-1 increases exploratory behavior and laboratory fitness of Caenorhabditis elegans. PLoS Genet. 2020 Feb 24;16(2):e1008606.
2019
Crombie TA, Zdraljevic S, Cook DE, Tanny RE, Brady SC, Wang Y, Evans KS, Hahnel S, Lee D, Rodriguez BC, Zhang G, van der Zwagg J, Kiontke K, Andersen EC. Deep sampling of Hawaiian Caenorhabditis elegans reveals high genetic diversity and admixture with global populations. Elife. 2019 Dec 3;8:e50465.
DOI: 10.7554/eLife.50465
Lee D, Zdraljevic S, Cook DE, Frézal L, Hsu JC, Sterken MG, Riksen JAG, Wang J, Kammenga JE, Braendle C, Félix MA, Schroeder FC, Andersen EC. Selection and gene flow shape niche-associated variation in pheromone response. Nat Ecol Evol. 2019 Oct;3(10):1455-1463.
Brady SC, Zdraljevic S, Bisaga KW, Tanny RE, Cook DE, Lee D, Wang Y, Andersen EC. A Novel Gene Underlies Bleomycin-Response Variation in Caenorhabditis elegans. Genetics. 2019 Aug;212(4):1453-1468.
2018
Zamanian M, Cook DE, Zdraljevic S, Brady SC, Lee D, Lee J, Andersen EC. Discovery of genomic intervals that underlie nematode responses to benzimidazoles. PLoS Negl Trop Dis. 2018 Mar 30;12(3):e0006368.
Richaud A, Zhang G, Lee D, Lee J, Félix MA. The Local Coexistence Pattern of Selfing Genotypes in Caenorhabditis elegans Natural Metapopulations. Genetics. 2018 Feb;208(2):807-821.
2017
Kim J, Lee D, Lee J. A quantitative trait locus for nictation behavior on chromosome V. MicroPubl Biol. 2017 Sep 19;2017:10.17912/W23D39.
DOI: 10.17912/W23D39
Lee D, Yang H, Kim J, Brady S, Zdraljevic S, Zamanian M, Kim H, Paik YK, Kruglyak L, Andersen EC, Lee J. The genetic basis of natural variation in a phoretic behavior. Nat Commun. 2017 Aug 17;8(1):273.
Lee D, Lee H, Kim N, Lim DS, Lee J. Regulation of a hitchhiking behavior by neuronal insulin and TGF-β signaling in the nematode Caenorhabditis elegans. Biochem Biophys Res Commun. 2017 Mar 4;484(2):323-330.
2015
Lee D, Lee H, Choi M, Park S, Lee J. (2015). Nictation Assays for Caenorhabditis and Other Nematodes. Bio-protocol 5(7): e1433.
2011
Lee H, Choi MK, Lee D, Kim HS, Hwang H, Kim H, Park S, Paik YK, Lee J. Nictation, a dispersal behavior of the nematode Caenorhabditis elegans, is regulated by IL2 neurons. Nat Neurosci. 2011 Nov 13;15(1):107-12. Erratum in: Nat Neurosci. 2013 Dec;16(12):1906.
DOI: 10.1038/nn.2975