Bioinformatics GS wiki

Here are a list of different functions in current release

  1. GC(inputstring)
    • This fucntion calculations the GC% of a DNA sequence, useful for primer design
  2. Seq3(inputstring)
    • This fucntion converts 3 letter AA to 1 letter AA
  3. Seq1(inputstring)
    • This fucntion converts 1 letter AA to 3 letter AA
  4. MW(inputstring)
    • This fucntion calculates the molecular weigth (Dalton) of a protein sequence
  5. reverse(inputstring)
    • This fucntion reverse a DNA sequence
  6. complement(inputstring,opt_isRNA)
    • This fucntion returns the complement of a DNA sequence
  7. revcom(inputstring,opt_isRNA)
    • This fucntion returns the reverse complement of a DNA sequence
  8. translate(inputstring,start,end)
    • This fucntion translates the DNA sequence to protein sequence with optional starting and ending position
  9. SeqDiff(inputstring1,inputstring2)
    • This fucntion returns the mutations from sequence 1 to sequence 2
  10. Mutation2Seq(inputstring1,inputstring2)
    • This fucntion converts mutation to protein sequence
  11. Mutation2Codon(inputstring1,inputstring2)
    • This fucntion converts mutation to DNA sequence