Programs

• AutoPoly: population assignment and parentage for autopolyploids.

Featured in: Field DL, Broadhurst LM, Elliot C, Young AG (2017). Population assignment in autopolyploids. Heredity. 119: 389-401.

• SlidingWindows: genome scans for diversity and divergence for PoolSeq data.

Featured in: Tavares H, Whibley A, Field DL, et al. (2018). Selection and gene flow shape genomic islands that control floral guides. Proceedings of the National Academy of Sciences 115 (43), 11006-11011.

• SlowClines: Maximum Likelihood cline fitting accounting for population structure.

Featured in: Bradley D, Xu P, Mohorianu I, Whibley A, Field DL,…, Coen R et al. (2017). Evolution of flower colour pattern through selection on regulatory small RNAs. Science. 358: 925-928.

• FastClines: rapid geographic cline approximation for spatially explicit sequence data.

In preparation.

Software available at: https://github.com/dfield007