Mittan-Moreau, C., D.R. Trumbo, K. Zamudio. Submitted. Genomic consequences of range expansion in introduced North American cane toads. Journal of Heredity.

Erwin, J.A, K.A. Logan, D.R. Trumbo, W.C. Funk, M. Culver. 2024. Effects of hunting on mating, relatedness, and genetic diversity in a puma population. Molecular Ecology 33(20): 1-18. Abstract.

Beer, M.A., D.R. Trumbo, R.M. Rautsaw, C.P. Kozakiewicz, B. Epstein, P.A. Hohenlohe, R.A. Alford, L. Schwarzkopf, A. Storfer. 2024. Selection and gene flow interact to produce spatial variation in genomic signatures of local adaptation during the cane toad invasion of Australia. Molecular Ecology 33(16): 1-19. Abstract.

Gill, B.A., Z.G. Compson, C.L. Atkinson, A.J. Shogren, C.R. Smith, M. Mims, S. Silknetter, D.R. Trumbo, G.L. O'Malley, H. Dunleavy, S. Cook, M.H. Busch, D. Allen, A. Ruhi, K. Leathers, T.M. Apgar, T.M. Neeson, M.C. Malish, K. Hollien, M.T. Bogan. 2024. Combined benthic and stream edge sampling better represent macroinvertebrate assemblages than benthic sampling alone along an aridity gradient. Limnology and Oceanography Methods 22(4): 208-216 Abstract.

Trumbo, D.R., B.M. Hardy, H. Crockett, E. Muths, B.R. Forester, R.G. Cheek, S.J. Zimmerman, S. Corey-Rivas, L. Bailey, W.C. Funk. 2023. Conservation genomics of an endangered, montane amphibian reveals low population structure, low genomic diversity, and selection pressure from disease. Molecular Ecology 32(24): 6777-6795. Abstract.

Cheek, R., B. Forester, P. Salerno, D.R. Trumbo, N. Chen, S.T. Sillett, S. Morrison, C. Ghalambor, W.C. Funk. 2022. Habitat-linked genetic variation supports microgeographic adaptive divergence in an island-endemic bird species. Molecular Ecology 31(10): 2830-2846. Abstract.

Fountain-Jones, N.M., S. Kraberger, R. Gagne, M.L.J. Gilbertson, D.R. Trumbo, M. Charleston, P. Salerno, W.C. Funk, K. Crooks, K. Logan, M. Alldredge, S. Dellicour, G. Baele, X. Didelot, S. VandeWoude, S. Carver, M.E. Craft. 2022. Hunting alters viral transmission and evolution. Nature Ecology and Evolution 6: 174-182. Abstract.

Páez-Vacas, M.I., D.R. Trumbo, W.C. Funk. 2021. Contrasting environmental drivers of genetic and phenotypic divergence in an Andean poison frog (Epipedobates anthonyi). Journal of Heredity 128: 33-44. Abstract.

Fountain-Jones, N.M., C. Kozakiewicz, B. Forester, E. Landguth, S. Carver, M. Charleston, R. Gagne, B. Greenwell, D.R. Trumbo, M. Mayer, N. Clark, G. Machado. 2021. MrIML: Multi-response interpretable machine learning to model genomic landscapes. Molecular Ecology Resources 21(8): 2766-2781. Abstract.

Gagne, R.B., S. Kraberger, R. McMinn, D.R. Trumbo, C.R. Anderson, K. Logan, M. Alldredge, K. Fox, K. Griffin, S. VandeWoude. 2021. Viral sequences recovered from puma tooth DNA reconstruct statewide viral phylogenies. Frontiers in Ecology and Evolution 9: 1-9. Abstract.

Trumbo, D.R., W.C. Funk, G.B. Pauly, J.M. Robertson. 2021. Conservation genetics of an island-endemic lizard: low Ne and the critical role of intermediate temperatures for genetic connectivity. Conservation Genetics 22: 783-797. Abstract.

Fountain-Jones, N.M., S. Carver, S. Kraberger, R.B. Gagne, D.R. Trumbo, P. Salerno, W.C. Funk, K. Crooks, R. Biek, M. Alldredge, K. Logan, G. Baele, S. Dellicour, H.B Ernest, S. VandeWoude, M.E. Craft. 2021. Host relatedness and landscape connectivity shape pathogen spread in the puma, a large secretive carnivore. Communications Biology 4(12): 1-9. Abstract.

Trumbo, D.R., P. Salerno, K. Logan, M. Alldredge, R.B. Gagne, C.P. Kozakiewicz, S. Kraberger, N. Fountain-Jones, M.E. Craft, S. Carver, H.B. Ernest, K. Crooks, S. VandeWoude, W.C. Funk. 2019. Urbanization impacts apex predator gene flow but not genetic diversity across an urban-rural divide. Molecular Ecology 28(22): 4926-4940. Abstract.

Kozakiewicz, C.P., C.P. Burridge, W.C. Funk, P. Salerno, D.R. Trumbo, R.B. Gagne, E.E. Boydston, L.M. Lyren, M.K. Jennings, S.P.D. Riley, L.E.K. Serieys, S. VandeWoude, K. Crooks, S. Carver. 2019. Urbanization reduces connectivity in bobcat (Lynx rufus) populations at both intra- and inter-population spatial scales. Molecular Ecology 28(23): 5068-5085. Abstract.

Fitak, R.R., J.D. Antonides, E.J. Baitchman, E. Bonaccorso, J. Braun, S. Kubiski, E. Chiu, A.C. Fagre, R.B. Gagne, J.S. Lee, J.L. Malmberg, M.D. Stenglein, R.J. Dusek, D. Forgacs, N.M. Fountain-Jones, M.L.J. Gilbertson, K.E.L. Worsley-Tonks, W.C. Funk, D.R. Trumbo, B.M. Ghersi, W. Grimaldi, S.E. Heisel, C.M. Jardine, P.L. Kamath, D. Karmacharya, C.P. Kozakiewicz, S. Kraberger, D.A. Loisel, C. McDonald, S. Miller, D. O’Rourke, C.N. Ott-Conn, M. Páez-Vacas, A.J. Peel, W.C. Turner, M.C. VanAcker, S. VandeWoude, J. Pecon-Slattery. 2019. The expectations and challenges of wildlife disease research in the era of genomics: forecasting with a horizon scan-like exercise. Journal of Heredity 110(3): 261-274. Abstract.

Bower, D., Y. Kiyomi, D.R. Trumbo, R. Alford, L. Schwarzkopf. 2018. Spinal arthritis in cane toads across the Australian landscape. Scientific Reports 8: 1-5. Abstract.

Fountain-Jones, N., M. Craft, W.C. Funk, C. Kozakiewicz, D.R. Trumbo, E. Boydston, L. Lyren, K. Crooks, J. Lee, S. VandeWoude, S. Carver. 2017. Urban landscapes can change virus gene flow and evolution in a fragmentation-sensitive carnivore. Molecular Ecology 26(22): 6487-6498. Abstract.

Zero V., A. Barocas, D. Jochimsen, A. Pelletier, X. Giroux-Bougard, D.R. Trumbo, J.A. Castillo, D.E. Mack, M. Linnell, R. Pigg, J. Hoisington-Lopez, S. Spear, M.A. Murphy, L. Waits. 2017. Complementary network-based approaches for exploring genetic structure and functional connectivity in two vulnerable, endemic ground squirrels. Frontiers in Genetics 8(81): 1-13. Abstract.

Trumbo, D.R., B. Epstein, P. Hohenlohe, R. Alford, L. Schwarzkopf, A. Storfer. 2016. Mixed population genomics support for the central marginal hypothesis across the invasive range of the cane toad (Rhinella marina) in Australia. Molecular Ecology 25(17): 4161–4176. Abstract.

Pope, W.H., C.A. Bowman, D.A. Russell, D. Jacobs-Sera, D.J. Asai, S.G. Cresawn, W.R. Jacobs Jr, R.W. Hendrix, J.G. Lawrence, G.F. Hatfull. (D.R. Trumbo in SEA-PHAGES authors list, Additional Information). 2015. Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity. eLife: 1-65. Abstract.

Trumbo, D.R., S.F. Spear, J. Baumsteiger, A. Storfer. 2013. Rangewide landscape genetics of an endemic Pacific northwestern salamander. Molecular Ecology 22(5): 1250-1266. Abstract.

Trumbo, D.R., A.A. Burgett, R.L. Hopkins, E.G. Biro, J.M. Chase, J.H. Knouft. 2012. Integrating breeding pond, landcover, and climate variables in predictive species distribution models for amphibians. Landscape Ecology 27(8): 1183-1196. Abstract.

Trumbo, D.R., A.A. Burgett, J.H. Knouft. 2011. Testing climate-based species distribution models with recent field surveys of pond-breeding amphibians in eastern Missouri. Canadian Journal of Zoology 89(11): 1074-1083. Abstract.

Knouft, J.H., N.M. Caruso, P.J. Dupre, K.R. Anderson, D.R. Trumbo, J. Puccinelli. 2011. Using fine-scale GIS data to assess the relationship between intra-annual environmental niche variability and population density in a local stream fish assemblage. Methods in Ecology and Evolution 2(3): 303-311. Abstract.