Intro to bioinformatics

Francis Crick's original paper on Central Dogma (1970)

More recent paper explaining Central Dogma and modern interpretations

Central Dogma: DNA to Proteins:

Radial table with mapping of RNA codons to amino acids

Table of amino acids

RNA_codons.txt

DNA_seq_random.txt

RNA_translation_shell0.py (easier)

RNA_translation_shell1.py

RNA_translation_shell2.py (harder)

Reverse engineering: Proteins to DNA

Reverse engineering the genetic code (pdf)

Amino acid sequence for tyrocidin B1

peptide_to_RNA_shell0.py (easier)

peptide_to_RNA_shell1.py (harder)

Finding the Origin of Replication:

DNA replication: Finding the Origin of Replication for bacteria (pdf)

Partial DNA sequence from Vibrio_cholerae (Cholera causing bacteria)

Full DNA sequence from Vibrio_cholerae

pattern_count_shell0.py

frequent_patterns_shell0.py