Yu-Qian Lin, Yung-Chun Shih, Chung-Te Chang. (2025) Plasmid DNA Purification Using Filterprep: A Modular Workflow with Optional Endotoxin Removal. Bio-protocol (in preparation)
Yu-Hsuan Cheng, Yu-Jiu Wu, Yung-Chun Shih, Yu-Qian Lin, Yu-Wei Chang, Yu-Heng Wu, En-Wei Hu, Ren-Hsuan Ku, Cheng-Mu Wu, Shao-Chi Wu, Ting-Yu Yeh, Chung-Te Chang. (2025) The Filterprep: A simple and efficient approach for high-yield, high-purity plasmid DNA purification. New Biotechnology 90:77-87
Hua-Sheng Chiu*, Sonal Somvanshi*, Chung-Te Chang*, Eric de Bony de Lavergne, Zhaowen Wei, Chih-Hung Hsieh, Wim Trypsteen, Kathleen A. Scorsone, Ektaben Patel, Tien T. Tang, David B. Flint, Mohammad Javad Najaf Panah, Hyunjae Ryan Kim, Purva Rathi, Yan-Hwa Wu Lee, Sarah Woodfield, Sanjeev A. Vasudevan, Andras Attila Heczey, M. Waleed Gaber, Gabriel Oliveira Sawakuchi, Ting-Wen Chen, Pieter Mestdagh, Xuerui Yang, Pavel Sumazin. (2025) Coordinated regulation by lncRNAs results in tight lncRNA-target couplings. Cell Genomics 5:100927 (*co-first authors) ► Journal cover article
Chung-Te Chang*, Chen-Kang Chiang*, Kai-Yu Chen, Yu-Hsuan Cheng, Huai-Hsuan Chiu, Yung-Ju Shen, Hsiao-Wei Liao. (2025) Development of a Novel TRIzol-like Reagent for Sequential Extraction of Biomolecules to Facilitate Multiomics Studies. Microchemical Journal 215:114371 (*co-first authors)
Yu-Hsuan Cheng, Ting-Wen Chen, Wei-Chung Chiang, Jean-Cheng Kuo, Yi-Sheng Ho, Michelle Noble, Chung-Te Chang. (2025) EDC4 C-terminal domain scaffolds P-body assembly and links P-body dynamics to p53-mediated tumor suppression. RNA 31:1176-1194
Ting-Wen Chen, Hsiao-Wei Liao, Michelle Noble, Jing-Yi Siao, Yu-Hsuan Cheng, Wei-Chung Chiang, Yi-Tzu Lo, Chung-Te Chang. (2024) Human DCP1 is crucial for mRNA decapping and possesses paralog-specific gene regulating functions. eLife 13:RP94811
Ramona Weber, Chung-Te Chang. (2024) Human DDX6 regulates translation and decay of inefficiently translated mRNAs. eLife 13:RP92426
Chung-Te Chang. (2024) Analysis of Human Endogenous mRNA Deadenylation Complexes by High-Resolution Gel Electrophoresis. Methods in Molecular Biology 2723:47-54
Cheng-Yen Kao*, Chung-Te Chang*, Pei-Yun Kuo, Chia-Jen Lin, Huai-Hsuan Chiu, Hsiao-Wei Liao. (2023) Sequential isolation of metabolites and lipids from a single sample to achieve multiomics by using TRIzol reagent. Talanta 258:124416 (*co-first authors)
Isioma I I Enwerem, Nathan D Elrod, Chung-Te Chang, Ai Lin, Ping Ji, Jennifer A Bohn, Yevgen Levdansky, Eric J Wagner, Eugene Valkov, Aaron C Goldstrohm. (2021) Human Pumilio proteins directly bind the CCR4-NOT deadenylase complex to regulate the transcriptome. RNA 27:445-464
René M Arvola, Chung-Te Chang, Joseph P Buytendorp, Yevgen Levdansky, Eugene Valkov, Peter L Freddolino, Aaron C Goldstrohm. (2020) Unique repression domains of Pumilio utilize deadenylation and decapping factors to accelerate destruction of target mRNAs. Nucleic Acids Research 48:1843-1871
Aoife Hanet, Felix Räsch, Ramona Weber, Vincenzo Ruscica, Maria Fauser, Tobias Raisch, Duygu Kuzuoğlu-Öztürk, Chung-Te Chang, Dipankar Bhandari, Cátia Igreja, Lara Wohlbold. (2019) HELZ directly interacts with CCR4-NOT and causes decay of bound mRNAs. Life Science Alliance 2: e201900405
Chung-Te Chang, Sowndarya Muthukumar, Ramona Weber, Yevgen Levdansky, Ying Chen, Dipankar Bhandari, Catia Igreja, Lara Wohlbold, Eugene Valkov, Elisa Izaurralde. (2019) A low-complexity region in human XRN1 directly recruits deadenylation and decapping factors in 5'-3' messenger RNA decay. Nucleic Acids Research 47:9282-9295
Tobias Raisch*, Chung-Te Chang*, Yevgen Levdansky*, Sowndarya Muthukumar, Stefan Raunser, Eugene Valkov. (2019) Reconstitution of recombinant human CCR4-NOT reveals molecular insights into regulated deadenylation. Nature Communications 10:3173 (*co-first authors)
Eugene Valkov*, Sowndarya Muthukumar*, Chung-Te Chang*, Stefanie Jonas, Oliver Weichenrieder, Elisa Izaurralde. (2016) Structure of the Dcp2-Dcp1 mRNA-decapping complex in the activated conformation. Nature Structural & Molecular Biology 23:574-579 (*co-first authors)
Ying Chen, Andreas Boland Duygu Kuzuoğlu-Öztürk, Praveen Bawankar, Belinda Loh, Chung-Te Chang, Oliver Weichenrieder, Elisa Izaurralde. (2014) A DDX6-CNOT1 complex and W-binding pockets in CNOT9 reveal direct links between miRNA target recognition and silencing. Molecular Cell 54:737-750 ► Journal cover article
Chung-Te Chang, Natalia Bercovich, Belinda Loh, Stefanie Jonas, Elisa Izaurralde. (2014) The activation of the decapping enzyme DCP2 by DCP1 occurs on the EDC4 scaffold and involves a conserved loop in DCP1. Nucleic Acids Research 42:5217-5233
Chung‐Te Chang*, Guillaume M Hautbergue*, Matthew J Walsh, Nicolas Viphakone, Thamar B van Dijk, Sjaak Philipsen, Stuart A Wilson. (2013) Chtop is a component of the dynamic TREX mRNA export complex. EMBO Journal 32:473-486 (*co-first authors)
Joerg E Braun, Vincent Truffault, Andreas Boland, Eric Huntzinger, Chung-Te Chang, Gabrielle Haas, Oliver Weichenrieder, Murray Coles, Elisa Izaurralde. (2012) A direct interaction between DCP1 and XRN1 couples mRNA decapping to 5' exonucleolytic degradation. Nature Structural & Molecular Biology 19:1324-1331
Nicolas Viphakone, Guillaume M Hautbergue, Matthew Walsh, Chung-Te Chang, Arthur Holland, Eric G Folco, Robin Reed, Stuart A Wilson. (2012) TREX exposes the RNA-binding domain of Nxf1 to enable mRNA export. Nature Communications 3:1006
Abimael Cruz-Migoni, Guillaume M Hautbergue, Peter J Artymiuk, Patrick J Baker, Monika Bokori-Brown, Chung-Te Chang, Mark J Dickman, Angela Essex-Lopresti, Sarah V Harding, Nor Muhammad Mahadi, Laura E Marshall, George W Mobbs, Rahmah Mohamed, Sheila Nathan, Sarah A Ngugi, Catherine Ong, Wen Fong Ooi, Lynda J Partridge, Helen L Phillips, M Firdaus Raih, Sergei Ruzheinikov, Mitali Sarkar-Tyson, Svetlana E Sedelnikova, Sophie J Smither, Patrick Tan, Richard W Titball, Stuart A Wilson, David W Rice. (2011) A Burkholderia pseudomallei toxin inhibits helicase activity of translation factor eIF4A. Science 334:821-824
Guillaume M Hautbergue, Ming-Lung Hung, Matthew J Walsh, Ambrosius P L Snijders, Chung-Te Chang, Rachel Jones, Chris P Ponting, Mark J Dickman, Stuart A Wilson. (2009) UIF, a New mRNA export adaptor that works together with REF/ALY, requires FACT for recruitment to mRNA. Current Biology 19:1918-1924
Mei-Chi Su, Chung-Te Chang, Chiu-Hui Chu, Ching-Hsiu Tsai, Kung-Yao Chang. (2005) An atypical RNA pseudoknot stimulator and an upstream attenuation signal for -1 ribosomal frameshifting of SARS coronavirus. Nucleic Acids Research 33:4265-4275