Wubben, J., Cecilia, J. M., Calafate, C. T., Cano, J. C., & Manzoni, P. (2021, September). Evaluating the effectiveness of takeoff assignment strategies under irregular configurations. In 2021 IEEE/ACM 25th International Symposium on Distributed Simulation and Real Time Applications (DS-RT) (pp. 1-7). IEEE.

Cecilia, J. M., Manzoni, P., Trolle, D., Nielsen, A., Blanco, P., Prandi, C., ... & Senent, J. (2021, September). SMARTLAGOON: Innovative modelling approaches for predicting socio-environmental evolution in highly anthropized coastal lagoons. In Proceedings of the Conference on Information Technology for Social Good (pp. 204-209).

Hernández, D., Cecília, J. M., Calafate, C. T., Cano, J. C., & Manzoni, P. (2021, April). The Kuhn-Munkres algorithm for efficient vertical takeoff of UAV swarms. In 2021 IEEE 93rd Vehicular Technology Conference (VTC2021-Spring) (pp. 1-5). IEEE

Nakamura, Kiyoshy, et al. "FUDGE: a frugal edge node for advanced IoT solutions in contexts with limited resources." Proceedings of the 1st Workshop on Experiences with the Design and Implementation of Frugal Smart Objects. 2020.

CECILIA, J. M. (2020, August). Performance Evaluation of Clustering Algorithms on GPUs. In Intelligent Environments 2020: Workshop Proceedings of the 16th International Conference on Intelligent Environments (Vol. 28, p. 400). IOS Press.

Fernández-Pedauye, J., Periñán-Pascual, C., Arcas-Túnez, F., & Cecilia, J. M. (2020). Enhancing the spaCy Named Entity Recognizer for Crowdsensing. In Intelligent Environments 2020 (pp. 361-367). IOS Press

Hernández, D., Arcas-Túnez, F., Muñoz, A., & Cecilia, J. M. (2018, August). BAUSPACE: A Scalable Infrastructure for Soft Sensors Development. In Proceedings of the 47th International Conference on Parallel Processing Companion (p. 22). ACM.

Prades, J., Reaño, C., Silla, F., Imbernón, B., Pérez-Sánchez, H., & Cecilia, J. M. (2018, August). Increasing Molecular Dynamics Simulations Throughput by Virtualizing Remote GPUs with rCUDA. In Proceedings of the 47th International Conference on Parallel Processing Companion (p. 9). ACM.

Serrano, A., Imbernón, B., Pérez-Sánchez, H., Cecilia, J. M., Bueno-Crespo, A., & Abellán, J. L. (2018, August). Accelerating Drugs Discovery with Deep Reinforcement Learning: An Early Approach. In Proceedings of the 47th International Conference on Parallel Processing Companion (p. 6). ACM.

Martínez-Más, J., Bueno-Crespo, A., Imbernón, B., Cecilia, J. M., Martínez-España, R., Remezal-Solano, M., ... & Martínez-Cendán, J. P. (2018, August). Deep Learning Approach for Classifying Papanicolau Cervical Smears. In Proceedings of the 47th International Conference on Parallel Processing Companion (p. 7). ACM.

Imbernón, B., Cecilia, J. M., Cutillas-Lozano, J. M., & Giménez, D. (2018, August). Designing HYPERDOCK: A Parallel Hyperheuristic Method for Virtual Screening. In Proceedings of the 47th International Conference on Parallel Processing Companion (p. 10). ACM.

Cecilia, J. M., Imbernón, B., Cutillas-Lozano, J. M., & Giménez, D. Landscape Analysis for the Improvement of Hyperheuristics over Parameterized Metaheuristics. In Proceedings OLA'2018 International Workshop on Optimization and Learning: Challenges and Applications (pp-19-21). Alicante, Spain.

Pérez-Sánchez, H., Cerón-Carrasco, J. P., & Cecilia, J. M. (2017, August). Implementation of an efficient Blind Docking technique on HPC architectures for the discovery of allosteric inhibitors. In Parallel Processing Workshops (ICPPW), 2017 46th International Conference on (pp. 33-38). IEEE.

Saadi, H., Nouali-Taboudjemat, N., Rahmoun, A., Imbernón, B., Peréz-Sánchez, H., & Cecilia, J. M. (2017, August). Parallel desolvation energy term calculation for blind docking on GPU architectures. In Parallel Processing Workshops (ICPPW), 2017 46th International Conference on (pp. 16-22). IEEE.

Contreras, A. V., Navarro, S., Llanes, A., Muñoz, A., Pérez-Sánchez, H., & Cecilia, J. M. (2017, August). The Forex Market as an Elastic Network Model. In Intelligent Environments (IE), 2017 International Conference on (pp. 155-156). IEEE.

Llanes, A., Vélez, C., Sánchez, A. M., Pérez-Sánchez, H., & Cecilia, J. M. (2016, April). Parallel ant colony optimization for the hp protein folding problem. In International Conference on Bioinformatics and Biomedical Engineering (pp. 615-626). Springer, Cham.

Imbernón, B., Cecilia, J. M., & Giménez, D. (2016, March). Enhancing metaheuristic-based virtual screening methods on massively parallel and heterogeneous systems. In Proceedings of the 7th international workshop on programming models and applications for multicores and manycores (pp. 50-58). ACM.

Navarro, J. M., Imbernón, B., López, J. J., & Cecilia, J. M. (2015, October). Comparison of Parallel Computing Approaches of a Finite-Difference Implementation of the Acoustic Diffusion Equation Model. In Audio Engineering Society Convention 139. Audio Engineering Society.

Garcıa-Martınez, J. M., Garzón, E. M., Cecilia, J. M., Pérez-Sánchez, H., & Ortigosa, P. M. (2015). A GPU solution of the HP Protein Folding Problem based on UEGO. IWBBIO 2015, 59.

Imbernón, B., Llanes, A., Peña-García, J., Abellán, J. L., Pérez-Sánchez, H., & Cecilia, J. M. (2015, April). Enhancing the parallelization of non-bonded interactions kernel for virtual screening on GPUs. In International Conference on Bioinformatics and Biomedical Engineering (pp. 620-626). Springer, Cham.

Peréz-Sánchez, H., Fassihi, A., Cecilia, J. M., Ali, H. H., & Cannataro, M. (2015, April). Applications of high performance computing in bioinformatics, computational biology and computational chemistry. In International Conference on Bioinformatics and Biomedical Engineering (pp. 527-541). Springer, Cham.

Fang, J., Varbanescu, A. L., Imbernon, B., Cecilia, J. M., & Sánchez, H. E. P. (2014, September). Parallel Computation of Non-Bonded Interactions in Drug Discovery: Nvidia GPUs vs. Intel Xeon Phi. International Work-Conference on Bioinformatics and Biomedical Engineering, IWBBIO 2014 (pp. 579-588).

Peréz-Sánchez, H., Cecilia, J. M., & Merelli, I. The role of High Performance Computing in Bioinformatics. International Work-Conference on Bioinformatics and Biomedical Engineering, IWBBIO 2014, held in Granada (Spain), 2014.

Cerón-Carrasco, J. P., Cerezo, J., Zuniga, J., Requena, A., Contreras-Garcia, J., Chavan, S., ... & Sánchez, H. E. P. (2014). Application of parallel blind docking with BINDSURF for the study of platinum derived compounds as anticancer drugs. International Work-Conference on Bioinformatics and Biomedical Engineering, IWBBIO 2014 (pp. 972-976).

Carretero, J., Garcia-Blas, J., Singh, D. E., Isaila, F., Fahringer, T., Prodan, R., ... & Cecilia, J. M. (2014, September). Optimizations to enhance sustainability of MPI applications. In Proceedings of the 21st European MPI Users' Group Meeting (p. 145). ACM.

Hernández, M., García, J. M., & Cecilia, J. M. (2014). Early experiences running the 3d stencil jacobi method in intel xeon phi. In 11th InternationalL Conference. Applied Computing (pp. 85-92).

Man, D., Timon-Perez, I. M., Espinosa, J. A. S., Flores-Sintas, A., Cecilia, J. M., & Sánchez, H. E. P. (2014). An improved Fuzzy Clustering methodology applied to the study of Protein Conformational Ensembles. In IWBBIO (p. 1630).

Cerón-Carrasco, J. P., Cerezo, J., Zuniga, J., Requena, A., Contreras-Garcia, J., Chavan, S., ... & Sánchez, H. E. P. (2014). Application of parallel blind docking with BINDSURF for the study of platinum derived compounds as anticancer drugs. In IWBBIO (pp. 972-976).

Pérez-Sánchez, H., Guerrero, G. D., García, J. M., Peña, J., Cecilia, J. M., Cano, G., ... & Garcia-Rodriguez, J. (2013, August). Improving drug discovery using a neural networks based parallel scoring function. In Neural Networks (IJCNN), The 2013 International Joint Conference on (pp. 1-5). IEEE.

Guerrero, G. D., Cecilia, J. M., García, J. M., & Sánchez, H. E. P. (2013). Impact of implicit solvation models on database enrichment in GPU based blind Virtual Screening. In IWBBIO (pp. 731-734).

Guerrero, G. D., Perez-S, H. E., Cecilia, J. M., & Garcia, J. M. (2012, February). Parallelization of virtual screening in drug discovery on massively parallel architectures. In Parallel, Distributed and Network-Based Processing (PDP), 2012 20th Euromicro International Conference on (pp. 588-595). IEEE.

Hernández, M., Guerrero, G. D., Cecilia, J. M., Garcia, J. M., Inuggi, A., & Sotiropoulos, S. N. (2012, February). Accelerating Fibre Orientation Estimation from Diffusion Weighted Magnetic Resonance Imaging Using GPUs. In Proceedings of the 2012 20th Euromicro International Conference on Parallel, Distributed and Network-based Processing (pp. 622-626). IEEE Computer Society.

Pérez-Sánchez, H., Cecilia, J. M., & García, J. M. (2012). Recent Advances and Future Trend on the Emerging Role of GPUs as Platforms for Virtual Screening-Based Drug Discovery. In Virtual Screening. InTech.

Sánchez-Linares, I., Pérez-Sánchez, H., Guerrero, G. D., Cecilia, J. M., & García, J. M. (2011, September). Accelerating multiple target drug screening on GPUs. In Proceedings of the 9th international conference on computational methods in systems biology (pp. 95-102). ACM.

Cecilia, J. M., Garcia, J. M., Ujaldon, M., Nisbet, A., & Amos, M. (2011, May). Parallelization strategies for ant colony optimisation on GPUs. In Parallel and Distributed Processing Workshops and Phd Forum (IPDPSW), 2011 IEEE International Symposium on (pp. 339-346). IEEE.

Guerrero, G. D., Sánchez, H. E. P., Wenzel, W., Cecilia, J. M., & García, J. M. (2011, April). Effective Parallelization of Non-bonded Interactions Kernel for Virtual Screening on GPUs. In PACBB (pp. 63-69).

Cecilia, J. M., García, J. M., Guerrero, G. D., Martínez-del-Amor, M. A., Pérez-Jiménez, M. J., & Ujaldón, M. (2010, September). P systems simulations on massively parallel architectures. In Third International Workshop on Parallel Architectures and Bioinspired Algorithms (Vol. 1, pp. 17-26).

Cecilia, J. M., García, J. M., & Ujaldón, M. (2010, June). CUDA 2D stencil computations for the Jacobi method. In International Workshop on Applied Parallel Computing (pp. 173-183). Springer, Berlin, Heidelberg.

Martınez–del–Amor, M. A., Pérez–Hurtado, I., Pérez–Jiménez, M. J., Cecilia, J. M., Guerrero, G. D., & Garcıa, J. M. (2009, August). Simulating active membrane systems using GPUs. In Tenth Workshop on Membrane Computing (WMC10) (p. 369).

Cecilia, J. M., García, J. M., Guerrero, G. D., Martínez–del–Amor, M. A., Pérez–Hurtado, I., & Pérez–Jiménez, M. J. (2009, August). Implementing P systems parallelism by means of GPUs. In International Workshop on Membrane Computing (pp. 227-241). Springer, Berlin, Heidelberg.

Cecilia, J. M., García, J. M., & Ujaldón, M. (2009). The GPU on the Matrix-Matrix Multiply: Performance Study and Contributions. In PARCO (Vol. 19, pp. 331-340).

Cecilia, J. M., Moreno, F. J., & García, J. M. Acelerando algoritmos de deconvolución para imágenes de microscopía usando GPUs. In Proc. of the II Workshop en Aplicaciones de Nuevas Arquitecturas de Consumo y Altas Prestaciones (ANACAP09).

Guerrero, G. D., Cecilia, J. M., Garcia, J. M., Martínez-del-Amor, M., Pérez-Hurtado, I., & Pérez-Jiménez, M. J. (2009). Analysis of P systems simulation on CUDA. XX Jornadas de Paralelismo, 2009, 289-294.

Martínez del Amor, M. Á., Pérez Hurtado de Mendoza, I., Pérez Jiménez, M. D. J., Cecilia, J. M., Guerrero, G. D., & García, J. M. (2009). Simulation of recognizer P systems by using manycore GPUs. Proceedings of the Seventh Brainstorming Week on Membrane Computing, vol. II, 45-57. Sevilla, ETS de Ingeniería Informática, 2-6 de Febrero, 2009.