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Genomic rearrangements rewire chromatin contacts and drive adaptive gene expression divergence in mammals
Jui Bhattacharya, Mohan Lal, Kuljeet Singh Sandhu*
doi: https://doi.org/10.1101/2025.08.10.669527
Deciphering Binding Site Conformational Variability of Substrate Promiscuous and Specialist Enzymes
Deciphering Binding Site Conformational Variability of Substrate Promiscuous and Specialist Enzymes
Deeksha Thakur, Paras verma, Shashi B. Pandit*
doi: https://doi.org/10.1021/acs.jcim.5c01070
Evolutionary turnover of protein structural disorder drives aberrant proteome remodelling in naked mole rat
Purva Mishra,, SUkanya Bhattacharya, Jui Bhattacharya, Kuljeet Singh Sandhu*
doi:https://doi.org/10.64898/2026.04.27.720964
Genome assembly and annotation of the parasitoid jewel wasp Nasonia oneida
Genome assembly and annotation of the parasitoid jewel wasp Nasonia oneida
Anjali Rana, Paras Verma, Shashi Bhushan Pandit, John H. Werren, Xu Wang & Rhitoban Raychoudhury
doi: https://doi.org/10.1038/s41597-025-05375-0
PEXMap: A proteogenomic method for exon and isoform level mapping of mass spectrometry derived peptides
PEXMap: A proteogenomic method for exon and isoform level mapping of mass spectrometry derived peptides
Deepanshi Awasthee, Paras verma, Shashi B. Pandit*
doi: https://doi.org/10.64898/2026.04.29.721330
Preferred left-handed conformations of glycyls with pathogenic variants protect against aggregation
Purva Mishra, Rajesh Potlia, Kuljeet Singh Sandhu*
doi: https://doi.org/10.1101/2024.02.09.579738
Loss of conserved noncoding elements likely shaped the evolution of regressed phenotypes in cavefish
Mohan Lal, Jui Bhattacharya, Kuljeet Singh Sandhu*
Exon nomenclature and classification of transcripts (ENACT) provides a systematic framework to annotate exon attributes
Paras Verma, Deeksha Thakur, Deepanshi Awasthee, ,Shashi B. Pandit*
Uncovering the translatome impact of transcriptome induced diversity in eukaryotes: framework and innovative insights
Uncovering the translatome impact of transcriptome induced diversity in eukaryotes: framework and innovative insights
Paras Verma, Deeksha Thakur, Shashi B. Pandit*
An H3-K9-me-independent binding of Swi6/HP1 to siRNA-DNA hybrids initiates heterochromatin assembly at cognate dg-dh repeats in Fission Yeast
Jyotsna Kumar, Swati Haldar, Neelima Gupta, Viney Kumar, Manisha Thakur, Keerthivasan Raanin Chandradoss, Debarghya Ghose, Dipak Dutta, Kuljeet Singh Sandhu, Jagmohan Singh
HDAC-mediated immune cell dynamics and collagen deposition are essential for tissue regeneration in zebrafish and axolotl.
Poonam Sharma*,1, Mohan Lal#,1, Azeez Tehseen#,1, Ashish Sethi, Kuljeet Singh Sandhu*,1, Sharvan Sehrawat*,1, and Rajesh Rajesh Ramachandran*,1
[Submitted]
Weighted gene co-expression network analysis of nitrogen (N)-responsive genes and the putative role of G-quadruplexes in N use efficiency (NUE) in rice
Narendra Sharma1†, Bhumika Madan1, M. Suhail Khan1, Kuljeet S. Sandhu2, Nandula Raghuram1*
Front. Plant Sci., 07 June 2023
Sec. Plant Physiology
Volume 14 - 2023 | https://doi.org/10.3389/fpls.2023.1135675
Deciphering the phenotypic heterogeneity and drug response in cancer cells using activity and interactions in chromatin domains
Neetesh Pandey, Madhu Sharma, Arpit Mathur, Chukwuemeka George Anene-Nzel, Muhammad Hakimullah, Priyanka Patel, Indra Prakash Jha, Omkar Chandra, Shreya Mishra, Jui Bhattacharya, Ankur Sharma, Roger Foo, Kuljeet Sandhu, Amit Mandoli, Ramanuj DasGupta, Vibhor Kumar*
doi: https://doi.org/10.1101/2023.01.15.524115
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