Setting up a site
Start by finding the hill that you will be performing your tests on. The area should be in its natural state without too many paths or other man-made interferences. Decide how many sites you are going to set up, how big they will be, and how far apart they will be. We decided to do three 3x3 meter plots set 5 meters apart. The plots end up in a line going up the hill, and we marked them with flags. For our purposes, the bottom plot (plot 1) serves as a negative control.
Taking samples
We used a 2 cm soil corer to take samples that would be used for organic matter and bacteria testing. We pushed up to the 15 cm mark. For moisture content samples, we didn't need to be as precise about the amount, so we used a trowel to collect samples. Both types of samples were placed in plastic bags, and the locations were marked with flags so that samples would not be taken from the same place again. This also allowed us to ensure that samples were taken from a variety of places within the site. Once we got inside, we placed our core samples in Petri dishes to dry, and then quickly transitioned to weighing our moisture samples so that they would not start drying too soon.
Organic matter (humus) level, bacteria count, and moisture content tests
Below are step-by-step guides on how to do the three tests we performed, courtesy of the LaMotte Test Methods packet provided to us. Our raw data recording, statistics, and result analytic procedures are further discussed on the "sample results" page.
Organic Matter:
Determine the amount of organic material (humus) in your soil samples!
Materials:
27 labeled (1A-3C) plastic bags
27 labeled (1A-3C) flags
27 labeled (1A-3C) Petri dishes
Soil Core Extractor
LaMotte Test Kit STH-14 (Code 5010-01) Humus test
Procedure:
Collect three humus samples in each of your three plots using the soil core extractor, up to the 15cm mark, and store in labeled plastic bags. Mark where you took your sample from with a labeled flag.
Inside, transfer into the labeled Petri dishes and allow to dry on a windowsill overnight
Transfer eight 0.5 g measurements (0698) of soil to a soil extraction tube (0704)
Add demineralized water (1155) to the tube up to the 14 ml mark. Cap and shake to mix.
Use a 0.5 g spoon (0698) to add two level measurements of Humus Screening Reagent (5119) then cap and shake for one minute.
Add 15 drops of Soil Flocculating Reagent (5643). Cap and mix, then let sit for several minutes.
Use filter paper (0465) and a plastic funnel (0459) to filter the mixture into a second extraction tube.
Compare filtrate in the second tube with the Hmus Color Chart (1384)
Repeat the procedure for all three days
Bacteria:
Find the number of bacteria colonies within different dilutions of soil.
Materials:
9 labeled (1A-3C) plastic bags
9 labeled (1A-3C) flags
9 labeled (1A-3C) Petri dishes
Trowel
45 15 mL culture tubes with caps
45 3M Petrifilm Aerobic Count Plates
Sharpie and tape (labeling)
1 cc scoop
10 serological transfer pipettes (1 for each soil sample and 1 for distilled water)
Distilled water
P200 micropipette
Micropipette tips
Label 45 3M Petrifilm Aerobic Count Plates (1A "10-1" 3C "10-4")* for each of the soil samples.
Label 45 culture tubes (1A "100" 3C "10-4") for each of the soil samples.
Using a new transfer pipette, add 10 mL of distilled water to each of the culture tubes labeled with "100" dilution
Use the same pipette to add 9 mL of distilled water to the rest of the culture tubes, labeled "10-1", "10-2", "10-3", or
or "10-4".
Add 1 cc of the soil sample into the culture tube labeled "100" with the corresponding sample labeled.
Cap and shake vigorously.
Using a new clean pipette, remove 1 mL of the soil/water mixture from the "100" tube into the tube labeled "10-1" of the corresponding soil sample
Cap and shake vigorously
Using the same pipette, remove 1 mL of the soil/water mixture from the "10-1" tube into the tube labeled "10-2" of the corresponding soil sample
Cap and shake vigorously
Using the same pipette, remove 1 mL of the soil/water mixture from the "10-2" tube into the tube labeled "10-3" of the corresponding soil sample
Cap and shake vigorously
Using the same pipette, remove 1 mL of the soil/water mixture from the "10-3" tube into the tube labeled "10-4" of the corresponding soil sample
Cap and shake vigorously
All five tubes of the first soil sample (1A) should now have a soil/water mixture
Repeat steps 7-14 with all samples (1A-3C).
Plate 100 ul samples from each dilution (from 1A "10-1" to 1A "10-4") onto their own separate, corresponding labeled 3M Petrifilim Aerobic Count PLate using the micropipette and tips. Use a new tip for each dilution.
Use the smoother to spread out the soil/water mixture on the plate.
Repeat step 17 for each of the 9 soil samples (1A-3C).
Use a new clean tip for each dilution.
Clean out the cc scoop with every new soil sample to avoid cross-contamination.
Once all soil samples are plated, allow them to sit in a dark place, away from sunlight, for 48 hours to 72 hours.
After the plates have been sitting for at least 48 hours, examine each of the plates from "10-1" to "10-4".
Find the number with the least number of colonies (but at least 5 colonies) and record it in your data table.
To find the number of bacteria in a 1 cc soil sample, use this formula:
#microbes in 1 cc of soil = colonies on sheet x 102 x 10|dilution # at which these colonies were found|
If there are no individual colonies, but there's still a lawn at the 10-4, repeat the dilution adding a 5th (10-5) and 6th (10-6) dilutions, etc. as necessary until individual colonies are observed.
*Note: Dilution of "100" will not be plated.
Moisture:
Determine the moisture content of a soil sample based on weight!
Materials:
27 labeled (1A-3C) plastic bags
27 labeled (1A-3C) flags
27 labeled (1A-3C) Petri dishes
27 labeled (1A-3C) pieces of construction paper
Trowel
Scale
Procedure:
Collect three moisture samples from each plot using the trowel. Store in labeled plastic bags and mark where you took the sample from with a labeled flag.
Inside, first tare the scale to the weight of just the construction paper, then add all of the soil samples you took. Do not allow the sample to dry, weigh immediately. Record weight.
After weighing, dry the samples in an oven at 105o C for 24 hours
Remove from oven and allow to cool to room temperature
Weigh the samples again and record the weights
Calculate moisture content with this formula:
Moisture content Wet weight – Dry weight
On wet basis = ————————— X 100
Wet weight
Repeat the procedure for all three days