Selected Publications
All other publications: Google Scholar, Researchmap, or Trios.
All other publications: Google Scholar, Researchmap, or Trios.
Shinozaki et al. in preparation
Kuwabara K, Arimura S, Shirasawa K, Ariizumi T*. Plant Physiology, 2022 in press
Kashojiya S, Lu Y, Takayama M, Komatsu H, Minh, LHT, Nishida K, Shirasawa K, Miura K, Nonaka S, Masuda J, Kondo A, Ezura H* and Ariizumi T*. Modification of tomato breeding traits and plant hormone signaling by Target-AID, the genome-editing system inducing efficient nucleotide substitution. Horticulture Research, 2021, in press
Kuwabara K, Harada I, Matsuzawa Y, Ariizumi T,* Shirasawa K*. Organelle genome assembly uncovers the dynamic genome reorganization and cytoplasmic male sterility associated genes in tomato. Horticulture Research, 8: 250, 2021 [Press release]
Takei H, Shirasawa K*, Kuwabara K, Toyoda A, Matsuzawa Y, Iioka S, Ariizumi T*. De novo genome assembly of two tomato ancestors, Solanum pimpinellifolium and Solanum lycopersicum var. cerasiforme, by long-read sequencing. DNA Research, 28:dsaa029, 2021 [Press release] [data link for SP and SLC]
Deslous P, Bournonville C, Decros G, Okabe Y, Mauxion JP, Jorly J, Gadin S, Brès C, Mori K, Ferrand C, Prigent S, Ariizumi T, Ezura H, Hernould M, Rothan C, Pétriacq P, Gibon Y, Baldet P. Overproduction of ascorbic acid impairs pollen fertility in tomato. Journal of Experimental Botany, erab040, 2021
Shinozaki Y, Beauvoit BP, Takahara M, Hao S, Ezura K, Andrieu MH, Nishida K, Mori K, Suzuki Y, Kuhara S, Enomoto H, Kusano M, Fukushima A, Mori T, Kojima M, Kobayashi M, Sakakibara H, Saito K, Ohtani Y, Bénard C, Prodhomme D, Gibon Y, Ezura H, Ariizumi T*. Fruit setting rewires central metabolism via gibberellin cascades. Proceedings of the National Academy of Sciences of the USA 117:23970-23981, 2020 [Press release] [Nature Index]
Yano R, Ariizumi T, Nonaka S, Kawazu Y, Zhong S, Mueller L, Giovannoni JJ, Rose JKC, Ezura H.Comparative genomics of muskmelon reveals a potential role for retrotransposons in the modification of gene expression. Communications Biology, 3:432, 2020 [Press release]
Komatsu H, Abdellatif IMY, Yuan S, Ono M, Nonaka S, Ezura H, Ariizumi T*, Miura K*. Genome editing in PDS genes of tomatoes by non-selection method and of Nicotiana benthamiana by one single guide RNA to edit two orthologs. Plant Biotechnology, 37:213-221, 2020
Takei H, Shinozaki Y, Yano R, Kashojiya S, Hernould M, Chevalier C, Ezura H, Ariizumi T*. Loss-of-Function of a Tomato Receptor-Like Kinase Impairs Male Fertility and Induces Parthenocarpic Fruit Set. Frontiers in Plant Science, 10:403, 2019
Shinozaki Y, Ezura K, Hu J, Okabe Y, Bénard C, Prodhomme D, Gibon Y, Sun TP, Ezura H, Ariizumi T*. Identification and functional study of a mild allele of SlDELLA gene conferring the potential for improved yield in tomato. Scientific Reports, 13:12043, 2018 [Press release]
Shimatani Z, Kashojiya S, Takayama M, Terada R, Arazoe T, Ishii H, Teramura H, Yamamoto T, Komatsu H, Miura K, Ezura H*, Nishida K*, Ariizumi T,* Kondo A.Targeted base editing in rice and tomato using a CRISPR-Cas9 cytidine deaminase fusion. Nature Biotechnology, 35: 441-443, 2017 [Press release] [Nature Index]
Ezura K, Ji-Seong K, Mori K, Suzuki Y, Kuhara S, Ariizumi T*, Ezura H*. Genome-wide identification of pistil-specific genes expressed during fruit set initiation in tomato (Solanum lycopersicum). PLoS One, 12:e0180003, 2017
Shinozaki Y, Hao S, Kojima M, Sakakibara H, Ozeki-Iida Y, Zheng Y, Fei Z, Zhong S, Giovannoni JJ, Rose JK, Okabe Y, Heta Y, Ezura H, Ariizumi T*. Identification of the carotenoid modifying gene PALE YELLOW PETAL 1 as an essential factor in xanthophyll esterification and yellow flower pigmentation in tomato (Solanum lycopersicum). Plant Journal, 83:237-251, 2014 [Press release]
Hauvermale AL, Ariizumi T, Steber CM. Gibberellin signaling: a theme and variations on DELLA repression. Plant Physiology, 160:83-92, 2012
Ariizumi T, Lawrence PK, Steber CM. The Role of Two F-Box Proteins, SLEEPY1 and SNEEZY, in Arabidopsis Gibberellin Signaling. Plant Physiology, 155: 765-775, 2011
Ariizumi T* and Toriyama K. Genetic regulation of sporopollenin synthesis and pollen exine development. Annual Review of Plant Biology, 62:437-460, 2011
Saito T, Ariizumi T, Okabe Y, Asamizu E, Hiwasa-Tanase K, Fukuda N, Mizoguchi T, Yamazaki Y, Aoki K, Ezura H. TOMATOMA: a novel tomato mutant database distributing Micro-Tom mutant collections. Plant Cell Physiology, 52:283-296, 2011 [Press release]
Ariizumi T, Murase K, Sun TP, Steber CM.Proteolysis-independent downregulation of DELLA repression in Arabidopsis by the gibberellin receptor GIBBERELLIN INSENSITIVE DWARF1. The Plant Cell, 20:2447-2459, 2008
Ariizumi T and Steber CM. Seed germination of GA-insensitive sleepy1 mutants does not require RGL2 protein disappearance in Arabidopsis. The Plant Cell, 19: 791-804, 2007