Applied Systems Biology
2022 - vol 2
MSc / PhD course at the Faculty of Information Technology and Bionics, Pázmány Péter Catholic University
4 credits, lectures on Tuesdays and Thursdays between 16:15 – 18:00 (Hungarian local time)
Organised by Attila Csikász-Nagy and Andrea Ciliberto
All talks will be streamed through a zoom channel, but students can sit in to the ones labelled by "in person" below
Links to recordings of past presentations will appear on this page
Please contact Attila Csikász-Nagy if you need the zoom link to join live talks!
Lectures from 2021 can be found under 2021 vol1
Sep 13 - Attila Csikász-Nagy - in person.
Introduction to computational systems biology - youtube link
Sep 15 - Balázs Szappanos
Metabolic networks, flux balance analysis - youtube link
Sep 20 - Laurence Calzone
Modeling of biological systems using a logic approach - youtube link
Sep 22 - Andrea Ciliberto - in person
Models and experiments of chromosome segregation - youtube link
Sep 27 - Luca Cardelli
Protocol automation, Recording event histories into DNA with DSD or CRISPR - youtube link
Sep 29 - John Tyson
From the Belousov-Zhabotinsky Reaction to Biochemical Clocks, Traveling Waves and Cell Cycle Control - youtube link
Oct 4 - Jorge Carneiro - in person
Computational immunology - no video unfortunately - link to previous year's talk
Oct 6 - Dezső Módos
Biological networks and their applications - youtube link
Oct 11 - Bence Szalai - in person - youtube link
Perturbation gene expression signatures and their applications in systems pharmacology
Oct 13 - Francesco Ferrari
From 1D to 3D chromatin organization
Oct 18 - Gergely Röst - in person
Mathematical epidemiology - youtube link
Machine learning in image analysis
Oct 25 - Gábor Balázsi - in person
Cellular fitness landscapes and gene network dynamics - youtube link
Network epidemiology - youtube link
Nov 8 - Jacky Snoep
Modelling yeast glycolysis, from isolated enzyme kinetics to synchronisation waves in oscillatory cells - youtube link
Nov 10 - Marco Cosentino Lagomarsino
Cell growth models, allocation of resources - youtube link
Nov 15 - Didier Gonze
Multistability, bifurcations, and cell differentiation - youtube link
Nov 17 - Zoltán Gáspári
Riboswitches - youtube link
Nov 22 - Zoltán Szállási - in person
Computational versus systems biology – the cancer research view - youtube link
Nov 24 - Viktor Müller - in person
Data and models in infectious disease - youtube link
Nov 29 - Anna Lovrics and Daniel Kiss - in person
Modeling malignant cell growth using agent based systems - youtube link
Dec 1 - Attila Reményi - in person
Molecular logic of MAP kinase mediated signaling: from structures to systems - youtube link