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With the advent of high resolution mass spectrometers, able to identify thousands of proteins, metabolites and lipids in complex biological samples, only the application of bioinformatics can lead to the interpretation of data which can be relevant for research. The use of bioinformatic tools is a fundamental step in order to manage the large amount of data.
With the advent of high resolution mass spectrometers, able to identify thousands of proteins, metabolites and lipids in complex biological samples, only the application of bioinformatics can lead to the interpretation of data which can be relevant for research. The use of bioinformatic tools is a fundamental step in order to manage the large amount of data.
Skills:
Skills:
Bioinformatics: gene ontology, functional analysis, pathway analysis
Bioinformatics: gene ontology, functional analysis, pathway analysis
Software: IPA (Ingenuity Pathway Analysis), Cytoscape, STRING, PANTHER, DAVID, SecretomeP and SignalP, Funrich, GSEA, etc..
Software: IPA (Ingenuity Pathway Analysis), Cytoscape, STRING, PANTHER, DAVID, SecretomeP and SignalP, Funrich, GSEA, etc..
Multivariate analysis, data integration: Multivariate analysis, chemometrics, integration of metaproteomic and metabolomic data, system biology and modelling.
Multivariate analysis, data integration: Multivariate analysis, chemometrics, integration of metaproteomic and metabolomic data, system biology and modelling.
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