Publications

Allen, D. C., Larson, J., Murphy, C. A., Garcia, E. A., Anderson, K. E., Busch, M. H., Argerich, A., Belskis, A. M., Higgins, K. T., Saenz, V., Penaluna, B., Jones, J. B., and Whiles, M. Global patterns of allochthony in stream-riparian meta-ecosystems. Ecology Letters, 27(3), e14401. https://doi.org/10.1111/ele.14401


Jones, J.R., Graham, J..L, Obrecht, D.V., Harlan, J.D., Knowlton, M.F., Pollard, C., Parris, J., Thorpe, A.P. (2024). Role of edaphic, hydrologic, and land cover variables in determining dissolved organic carbon in Missouri (USA) reservoirs and streams. Lake Reserv Manage. XX:XXX–XXX. https://doi.org/10.1080/10402381.2024.2326057 


Johnson, S. L., Argerich, A., Ashkenas, L. R., Bixby, R. J., and Plaehn, D. C. (2023). Stream nitrate enrichment and increased light yet no algal response following forest harvest and experimental manipulation of headwater riparian zones. Plos One, 18(4), e0284590. https://doi.org/10.1371/journal.pone.0284590


Niu, J., Singh, S. K., Sivakumar, B., and Argerich, A. (2023). Editorial: Hydrological processes in agricultural lands. Frontiers in Earth Science, 11. https://doi.org/10.3389/feart.2023.1113184


Knott, K. K., Coleman, E., Cianci–Gaskill, J. A., O’Hearn, R., Niswonger, D., Brockman, J. D., Argerich, A., North, R., and Wenzel, J. (2022). Mercury, selenium, and fatty acids in the axial muscle of largemouth bass: Evaluating the influence of seasonal and sexual changes in fish condition and reproductive status. Ecotoxicology, 31, 761-781. https://doi.org/10.1007/s10646-022-02544-4


Bhattacharya, R., Jones, J. R., Graham, J. L., Obrecht, D. V., Thorpe, A. P., Harlan, J. D., and North, R. L. (2022) Nonlinear multidecadal trends in organic matter dynamics in Midwest reservoirs are a funciton of variable hydroclimate. Limnology and Oceanography, 67, 2531-2546. https://doi.org/10.1002/lno.12220


Jones, J. R., Obrecht, D. V., and Thorpe, A. P. (2022). Limnological characteristics of Lake of the Ozarks (Missouri, USA): long-term assessment following formation of a reservoir series. Lake and Reservoir Management, 38(4), 288-303. https://doi.org/10.1080/10402381.2022.2109534


Cianci-Gaskill, J. A., Knott, K. K., O’Hearn, R., Argerich, A., Niswonger, D., Wenzel, J., Whittier, J. B., and North, R. L. (2022). Microcystin accumulation in sportfish from an agricultural reservoir differs among feeding guild, tissue type, and time of sampling. Aquatic Toxicology, 250, 106242. https://doi.org/10.1016/j.aquatox.2022.106242


Bertuzzo, E., Hotchkiss, E. R., Argerich, A., Kominoski, J. S., Oviedo-Vargas, D., Savoy, P., Scarlett, R., von Schiller, D., and Heffernan, J. B. (2022). Respiration regimes in rivers: Partitioning source-specific respiration from metabolism time series. Limnology and Oceanography, 67, 2374-2388. https://doi.org/10.1002/lno.12207


Wymore, A. S., Johnes, P. J., Bernal, S., Brookshire, E. N. J., Fazekas, H. M., Helton, A. M., Argerich, A., Barnes, R. T., Coble, A. A., Dodds, W. K., Haq, S., Johnson, S. L., Jones, J. B., Kaushal, S. S., Kortelainen, P., López-Lloreda, C., Rodríguez-Cardona, B. M., Spencer, R. G. M., Sullivan, P. L., Yates, C. A., and McDowell, W. H. (2021). Gradients of anthropogenic nutrient enrichment alter N composition and DOM stoichiometry in freshwater ecosystems. Global Biogeochemical Cycles, 35(8), e2021GB006953. https://doi.org/10.1029/2021GB006953


Rodríguez-Cardona, B. M., Wymore, A. S., Argerich, A., Barnes, R. T., Bernal, S., Brookshire, E. N. J., Coble, A. A., Dodds, W. K., Fazekas, H. M., Helton, A. M., Johnes, P. J., Johnson, S. L., Jones, J. B., Kaushal, S. S., Kortelainen, P., López-Lloreda, C., Spencer, R. G. M., and McDowell, W. H. (2021). Shifting stoichiometry: Long-term trends in stream-dissolved organic matter reveal altered C:N ratios due to history of atmospheric acid deposition. Global Change Biology, 28(1), 98-114. https://doi.org/10.1111/gcb.15965


Jones, J. R., Pollard, C., and Obrecht, D. V. (2020). Factors influencing phosphorus in midcontinent impoundments (USA) and challenges for detecting abatement. Inland Waters. 12(1), 154-162. https://doi.org/10.1080/20442041.2020.1816802


Nikolakopoulou, M., Argerich, A., Bernal, S., Gacia, E., Ribot, M., Martí, E., Sorolla, A., and Sabater, F. (2020). Effect of three emergent macrophyte species on nutrient retention in aquatic environments under excess nutrient loading. Environmental science and technology, 54(23), 15376-15384. https://doi.org/10.1021/acs.est.0c03216


Jones, J. R., Thorpe, A. P., and Obrecht D. V. (2020) Limnological characteristics of Missouri reservoirs: synthesis of a long-term assessment. Lake and Reservoir Management, 36(4), 412-422. https://doi.org/10.1080/10402381.2020.1756997


Jones, J.R., Argerich, A., Obrecht, D. V., Thorpe, A.P., and North, R. L. (2020). Missouri Lakes and Reservoirs Long-term Limnological Dataset ver 1. Environmental Data Initiative. https://doi.org/10.6073/pasta/86d8d176e91410566b4de51df44c2624.


Kaylor, M. J., Argerich, A., White, S. M., VerWey, B. J., and Arismendi, I. (2018). A cautionary tale for in situ fluorometric measurement of stream chlorophyll a: Influences of light and periphyton biomass. Freshwater Science, 37(2), 287-295. https://doi.org/10.1086/697239


Nikolakopoulou, M., Argerich, A., Drummond, J. D., Gacia, E., Martí, E., Sorolla, A., and Sabater, F. (2018). Emergent macrophyte root architecture controls subsurface solute transport. Water Resources Research, 54(9), 5958-5972. https://doi.org/10.1029/2017WR022381


Song, C., Dodds, W. K., Rüegg, J., Argerich, A., Baker, C. L., Bowden, W. B., Douglas, M. M., Farrell, K. J., Flinn, M. B., Garcia, E. A., Helton, A. M., Harms, T. K., Jia, S., Jones, J. B., Koenig, L. E., Kominoski, J. S., McDowell, W. H., McMaster, D., Parker, S. P., Rosemond, A. D., Ruffing, C. M., Sheehan, K. R., Trentman, M. T., Whiles, M. R., Wollheim, W. M., and Ballantyne, F. (2018). Continental-scale decrease in net primary productivity in streams due to climate warming. Nature Geoscience, 11. https://doi.org/10.1038/s41561-018-0125-5


Pennington, R., Argerich, A., and Haggerty, R. (2018). Measurement of gas-exchange rate in streams by the oxygen–carbon method. Freshwater Science, 37(2), 222-237. https://doi.org/10.1086/698018


Ribot, M., Bernal, S., Nikolakopoulou, M., Vaessen, T. N., Cochero, J., Gacia, E., Sorolla, A., Argerich, A., Sabater, F., Isnard, M., and Martí, E. (2017). Enhancement of carbon and nitrogen removal by helophytes along subsurface water flowpaths receiving treated wastewater. Science of the Total Environment, 599, 1667-1676. https://doi.org/10.1016/j.scitotenv.2017.05.114


Soranno, P. A., and others. (2017). LAGOS-NE: a multi-scaled geospatial and temporal database of lake ecological context and water quality for thousands of US lakes, GigaScience, 6, 1-22, https://doi.org/10.1093/gigascience/gix101


Arismendi, I., Groom, J. D., Reiter, M., Johnson, S. L., Dent, L., Meleason, M., Argerich, A., and Skaugset, A. E. (2017). Suspended sediment and turbidity after road construction/improvement and forest harvest in streams of the Trask River watershed study, Oregon. Water Resources Research, 53(8), 6763-6783. https://doi.org/10.1002/2016WR020198


Krause, S., Lewandowski, J., Grimm, N. B., Hannah, D. M., Pinay, G., McDonald, K., Marti, E., Argerich, A., Pfister, L., Klaus, J., Battin, T., Larned, S. T., Schelker, J., Fleckenstein, J., Schmidt, C., Rivett, M. O., Watts, G., Sabater, F., Sorolla, A., and Turk, V. (2017). Ecohydrological interfaces as hot spots of ecosystem processes. Water Resources Research, 53(8), 6359-6376. https://doi.org/10.1002/2016WR019516


Argerich, A., Haggerty, R., Johnson, S. L., Wondzell, S. M., Dosch, N., Corson-Rikert, H., Ashkenas, L. R., Pennington, R., and Thomas, C. K. (2016). Comprehensive multiyear carbon budget of a temperate headwater stream. Journal of Geophysical Research-Biogeosciences, 121(5), 1306-1315. https://doi.org/10.1002/2015JG003050


Haggerty, R., Ribot, M., Singer, G. A., Martí, E., Argerich, A., Agell, G., and Battin, T. J. (2014). Ecosystem respiration increases with biofilm growth and bed forms: Flume measurements with resazurin. Journal of Geophysical Research-Biogeosciences, 119(12), 2220-2230. https://doi.org/10.1002/2013JG002498


González-Pinzón, R., Haggerty, R., and Argerich, A. (2014). Quantifying spatial differences in metabolism in headwater streams. Freshwater Science, 33(3), 798-811. https://doi.org/10.1086/677555


Izagirre, O., Argerich, A., Marti, E., and Elosegi, A. (2013). Nutrient uptake in a stream affected by hydropower plants: Comparison between stream channels and diversion canals. Hydrobiologia, 712(1), 105-116. https://doi.org/10.1007/s10750-012-1354-z


Argerich, A., Johnson, S. L., Sebestyen, S. D., Rhoades, C. C., Greathouse, E., Knoepp, J. D., Adams, M. B., Likens, G. E., Campbell, J. L., McDowell, W. H., Scatena, F. N., and Ice, G. G. (2013). Trends in stream nitrogen concentrations for forested reference catchments across the USA. Environmental Research Letters, 8(1). https://doi.org/10.1088/1748-9326/8/1/014039


Jones, J. R., Obrecht, D. V., and Thorpe, A. P. (2011). Chlorophyll maxima and chlorophyll: Total phosphorus ratios in Missouri reservoirs. Lake and Reservoir Management, 27(4), 321-328. https://doi.org/10.1080/07438141.2011.627625


Argerich, A., Martí, E., Sabater, F., and Ribot, M. (2011). Temporal variation of hydrological exchange and hyporheic biogeochemistry in a headwater stream during autumn. Journal of the North American Benthological Society, 30(3), 635-652. https://doi.org/10.1899/10-078.1


Argerich, A., Martí, E., Sabater, F., Haggerty, R., and Ribot, M. (2011). Influence of transient storage on stream nutrient uptake based on substrata manipulation. Aquatic Sciences, 73(3), 365-376. https://doi.org/10.1007/s00027-011-0184-9


Argerich, A., Haggerty, R., Martí, E., Sabater, F., and Zarnetske, J. P. (2011). Quantification of metabolically active transient storage (MATS) in two reaches with contrasting transient storage and ecosystem respiration. Journal of Geophysical Research, 116(G03034), 14. https://doi.org/10.1029/2010jg001379


Martí, E., Fonollà, P., Von Schiller, D., Sabater, F., Argerich, A., Ribot, M., and Riera, J. (2009). Variation in stream C, N and P uptake along an altitudinal gradient: A space for time analogue to assess potential impacts of climate change. Hydrology Research, 40(2-3), 123-137. https://doi.org/10.2166/nh.2009.090


Jones, J. R., Knowlton, M. F., Obrecht, D. V., A.P. Thorpe, and J.D. Harlan. (2009). Role of contemporary and historic vegetation on nutrients in Missouri reservoirs: implications for developing nutrient criteria. Lake and Reservoir Management, 25(1), 111–118. https://doi.org/10.1080/07438140902772079


Haggerty, R., Martí, E., Argerich, A., Von Schiller, D., and Grimm, N. (2009). Resazurin as a “smart” tracer for quantifying metabolically active transient storage in stream ecosystems. Journal of Geophysical Research: Biogeosciences, 114(G03014). https://doi.org/10.1029/2008JG000942


Argerich, A., Martí, E., Sabater, F., Ribot, M., Von Schiller, D., and Riera, J. (2008). Combined effects of leaf litter inputs and a flood on nutrient retention in a Mediterranean mountain stream during fall. Limnology and Oceanography, 53(2), 631-641. https://doi.org/10.4319/lo.2008.53.2.0631


Haggerty, R., Argerich, A., and Martí, E. (2008). Development of a “smart” tracer for the assessment of microbiological activity and sediment-water interaction in natural waters: The resazurin-resorufin system. Water Resources Research, 44(W00D1). https://doi.org/10.1029/2007WR006670


Jones, J. R., Obrecht, D. V., Perkins, B. D., Knowton, M. F., Thorpe, A. P., Watanabe, S., and Bacon, R. R. (2008). Nutrients, seston, and transparency of Missouri reservoirs and oxbow lakes: An analysis of regional limnology. Lake and Reservoir Management. 24(2), 155-180. https://doi.org/10.1080/07438140809354058


Von Schiller, D., Martí, E., Riera, J., Ribot, M., Argerich, A., Fonollà, P., and Sabater, F. (2008). Inter-annual, annual and seasonal variation of P and N retention in a perennial and an intermittent stream. Ecosystems, 11(5), 670-687. https://doi.org/10.1007/s10021-008-9150-3


Martí, E., Sabater, F., Riera, J., Merseburguer, G. C., Von Schiller, D., Argerich, A., Caille, F., and Fonollà, P. (2006). Fluvial nutrient dynamics in a humanized landscape. Insights from a hierarchical perspective. Limnetica, 25(1-2), 513-526. https://doi.org/10.23818/limn.25.35


Martinoy, M., Boix, D., Sala, J., Gascón, S., Gifre, J., Argerich, A., de la Barrera, R., Brucet, S., Badosa, A., López-Flores, R., Méndez, M., Utgé, J. M., and Quintana, X. (2006). Crustacean and aquatic insect assemblages in the Mediterranean coastal ecosystems of Empordà wetlands (NE Iberian Peninsula). Limnetica, 25(2), 665-682. https://doi.org/10.23818/limn.25.45


Thorpe, A. P., Jones, J. R. (2005). Bacterial abundance in Missouri (USA) reservoirs in relation to trophic state and global patterns. SIL Proceedings, 1922-2010, 29(1), 239-249. https://doi.org/10.1080/03680770.2005.11902005


Obrecht, D. V., Thorpe, A. P., Jones, J. R. (2005). Responses in the James River Arm of Table Rock Lake, Missouri (USA) to point-source phosphorus reduction. SIL Proceedings, 1922-2010, 29(2), 1043-1048. https://doi.org/10.1080/03680770.2005.11902843


Argerich, A., Puig, M. A., and Pupilli, E. (2004). Effect of floods of different magnitude on the macroinvertebrate communities of Matarranya stream (Ebro River basin, NE Spain). Limnetica, 23(3-4), 283-294. https://doi.org/10.23818/limn.23.24


Click here for the publications of Dr. John R. Jones